| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21245023
Identifier: 21245023
GI number: 21245023
Start: 5097670
End: 5098197
Strand: Reverse
Name: 21245023
Synonym: XAC4311
Alternate gene names: NA
Gene position: 5098197-5097670 (Counterclockwise)
Preceding gene: 21245029
Following gene: 21245020
Centisome position: 98.51
GC content: 71.02
Gene sequence:
>528_bases ATGCCCGCCGCTGCCATCGCACCCCTGACGCCGTATCTCTCGATGGCCGCCATCGGCTACCTCTACTACCGGCGCATCCG GCGCAGCTTCGGCCGGCAGCAATGGAAGCCGGTGGCCACGGCGGTGCGCAGCGCCGTGCTGCTGATCGCGGTGGCAGCAC TGGCGTTCGCGGTGTACGGCTTGCCGCAGGTGCGGCTCGGTATTGCCGCAGGCACGCTGGTGGGCATCGGCCTGGGTGCG TTGTCGCTGCGCTACACGCATGCCGAATGGGTGGATGGTCAAGGCTGGTACACGCCCAATCCCTGGATCGGCGGCGGTTT GATGCTGGTGCTGCTGGGGCGCCTGGCCTGGCGCTGGGCCGATGGCGCGTTCACTGCCGGTGCGGCGGCGGCCGGTTCGC AGGCCAGCCCGCTGACGCTGGGAATCGCCGCGGCACTGGTGCTGTACTCGCTGGTGCACGTGGGCGGGCTGTGGTGGCGC CTGCGTCAGCTGCGCTTGCAGGCAGGCGCGGCGGGGGCGGCACGCTAA
Upstream 100 bases:
>100_bases GGTGCTGCCGCCTGTAGAAAGTGACACTTGGCACCTTGTTCGTGCCCATGGCTGGTTTCATTCTGCGCGGGTCGCTCCAC TCATCCGCAAAGGACTCGCC
Downstream 100 bases:
>100_bases CACCGCCGTTATCGGCCCTGCGCGCTCACACCTGCGAGCGGAACGGGAACACCAGTTTCTCGCCAAGCTTCTGCCGCAAC GGCCGCGCGCGCCAGCGCTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 175; Mature: 174
Protein sequence:
>175_residues MPAAAIAPLTPYLSMAAIGYLYYRRIRRSFGRQQWKPVATAVRSAVLLIAVAALAFAVYGLPQVRLGIAAGTLVGIGLGA LSLRYTHAEWVDGQGWYTPNPWIGGGLMLVLLGRLAWRWADGAFTAGAAAAGSQASPLTLGIAAALVLYSLVHVGGLWWR LRQLRLQAGAAGAAR
Sequences:
>Translated_175_residues MPAAAIAPLTPYLSMAAIGYLYYRRIRRSFGRQQWKPVATAVRSAVLLIAVAALAFAVYGLPQVRLGIAAGTLVGIGLGA LSLRYTHAEWVDGQGWYTPNPWIGGGLMLVLLGRLAWRWADGAFTAGAAAAGSQASPLTLGIAAALVLYSLVHVGGLWWR LRQLRLQAGAAGAAR >Mature_174_residues PAAAIAPLTPYLSMAAIGYLYYRRIRRSFGRQQWKPVATAVRSAVLLIAVAALAFAVYGLPQVRLGIAAGTLVGIGLGAL SLRYTHAEWVDGQGWYTPNPWIGGGLMLVLLGRLAWRWADGAFTAGAAAAGSQASPLTLGIAAALVLYSLVHVGGLWWRL RQLRLQAGAAGAAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18482; Mature: 18351
Theoretical pI: Translated: 11.78; Mature: 11.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPAAAIAPLTPYLSMAAIGYLYYRRIRRSFGRQQWKPVATAVRSAVLLIAVAALAFAVYG CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC LPQVRLGIAAGTLVGIGLGALSLRYTHAEWVDGQGWYTPNPWIGGGLMLVLLGRLAWRWA CCHHHHHHHHHHHHHHHHHHHHEEECHHHEECCCCCCCCCCCCHHHHHHHHHHHHHHHHC DGAFTAGAAAAGSQASPLTLGIAAALVLYSLVHVGGLWWRLRQLRLQAGAAGAAR CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure PAAAIAPLTPYLSMAAIGYLYYRRIRRSFGRQQWKPVATAVRSAVLLIAVAALAFAVYG CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC LPQVRLGIAAGTLVGIGLGALSLRYTHAEWVDGQGWYTPNPWIGGGLMLVLLGRLAWRWA CCHHHHHHHHHHHHHHHHHHHHEEECHHHEECCCCCCCCCCCCHHHHHHHHHHHHHHHHC DGAFTAGAAAAGSQASPLTLGIAAALVLYSLVHVGGLWWRLRQLRLQAGAAGAAR CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA