| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21245013
Identifier: 21245013
GI number: 21245013
Start: 5086710
End: 5088179
Strand: Reverse
Name: 21245013
Synonym: XAC4301
Alternate gene names: NA
Gene position: 5088179-5086710 (Counterclockwise)
Preceding gene: 21245014
Following gene: 21245012
Centisome position: 98.31
GC content: 66.6
Gene sequence:
>1470_bases ATGAAGCACCAGGCCCGTATCGCCGGCTATCGGCAACTGCGCGAGCAGCCGGTATGGAAACTGCTTGCCGCCGACCACGC ACCCGAACTGATCGGCCTGCTGCAGACGGTGCTGATGGATGGCGAACGCCGCCTGCCTTCGGCGGTGTTGCACGCGCGTT TGCAGCGCCAGCTCGACGCCTTGCGCGCCGACGAGCTCTCGCGTGAACTGCCGCGCACCGCACAGGCGTATCTTGCGCAT TGGTTGGCACAGGGCTGGTTGGAACGCCGCCTGCCGGAAGGCGCAGCCGAAGAAGAATACGAACTCTCGCGTGCCGCGAC CCAGGCCATCCGCTTCATCGTCGGCCTGCGCGAAAGCAGCAGCAGCGCCACCGAAAGCCGCCTGTCGCTGGTGATCCAGC AACTGGTGCAGTTGGCCGGACAGACCGAAGCCGATCCAGAGCTCCGGCTGGCCGCGCTGCGCGACGAACGTGCGCGCATC GATGCCGAGATCGAACGCGTGGCCTCCGGCCGCGTGGCGGCGCTGGACGGCAAGCGCGCGCTGGAACGTGCACGCGACCT GATCCATCTCTCCGACGAGCTGGCCGAAGATTTCCATCGCGTGCGCGACGACTTCGAGCAGCTCAACCGCCAATTCCGCG AGCGCATCATCGACGACGAAGGCGCGCGCGGCGACGTGCTCGAACAACTGTTCGACGGCGTGGACGTGATTGCAGACAGC GAAGCCGGGCGCACCTTCGAGGCGTTCTGGAGCCTGCTCAACGACACCCAGCAAAGCAGCCAACTCGACCAGGCGCTGGA TGCGCTGCTTGCCCGTGGGTTTGCCCGCAAGCTCGATCGCCGCGAACGCGCCTTCTTGCGCGGGCTGACCGGCACGCTGC TGGAGCGCGGTGGCGAGGTGCACACGGTGATGCAGCATTTCGCGCGCAGCCTGCGCGGTTTCGTGCAAAGCCGTGGGTAT CTGGAACAGCGCCGGCTCAATCAATTGCTCAAGCAGGCGCAGGGCGAAGCCTTGCAATTGCGCGACAGCCTGCACGCCAC CACCGCCACCGGCTATACGCAGCCGCTCAGCAGCAGCCGCCTGCGCTCGTTGTCGCAATGGCGGCTGCACGATCCACGGC TCACCCAGGTCGATGGACGCGTGCAGGCCGCCGACGCGGCCGAGATCTCGCTGGACAGCGTGGGCGATCTGGTCGCGCAA TCGGAGATCGATGTGCGCAGCCTGCGCAACGACCTGCATGAGCTGCTCGGCCAACGCCCGCGGCTGACCATCGGCGACGC CTTGCAACAACGCCCGGCCGTGCAGGGCCTGGGCAGCGTGATCGGATACCTGTCGCTGGGCACGCGCCACGGCATGGTGA TCGAAGGACAGATGGAAACGGTGCAATGGGAAGGCAGCGACGGCGCCGTGCGGCGCGCACGCATTCCCTTGGTGTGGTTT ACCCGGGAGAAACGCAATGAACTGGTCTGA
Upstream 100 bases:
>100_bases AAGATGCTGGGCAGCTTCCGCGAGGACGCGCGCACCCGCGCCGAATTCCTGCAGTTCATCGAAGTGGGCGGCAAGCGTTG AGGCAGTCGCGGCAGCGCCC
Downstream 100 bases:
>100_bases GGACACTGGCCTATACACCGACGAGGACACCGGGGCGCCGGCCATCGACGACCGCATGCCGATGGCGCAAACATCCAGTG CCGAGCCGCGCGGCGAGCTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 489; Mature: 489
Protein sequence:
>489_residues MKHQARIAGYRQLREQPVWKLLAADHAPELIGLLQTVLMDGERRLPSAVLHARLQRQLDALRADELSRELPRTAQAYLAH WLAQGWLERRLPEGAAEEEYELSRAATQAIRFIVGLRESSSSATESRLSLVIQQLVQLAGQTEADPELRLAALRDERARI DAEIERVASGRVAALDGKRALERARDLIHLSDELAEDFHRVRDDFEQLNRQFRERIIDDEGARGDVLEQLFDGVDVIADS EAGRTFEAFWSLLNDTQQSSQLDQALDALLARGFARKLDRRERAFLRGLTGTLLERGGEVHTVMQHFARSLRGFVQSRGY LEQRRLNQLLKQAQGEALQLRDSLHATTATGYTQPLSSSRLRSLSQWRLHDPRLTQVDGRVQAADAAEISLDSVGDLVAQ SEIDVRSLRNDLHELLGQRPRLTIGDALQQRPAVQGLGSVIGYLSLGTRHGMVIEGQMETVQWEGSDGAVRRARIPLVWF TREKRNELV
Sequences:
>Translated_489_residues MKHQARIAGYRQLREQPVWKLLAADHAPELIGLLQTVLMDGERRLPSAVLHARLQRQLDALRADELSRELPRTAQAYLAH WLAQGWLERRLPEGAAEEEYELSRAATQAIRFIVGLRESSSSATESRLSLVIQQLVQLAGQTEADPELRLAALRDERARI DAEIERVASGRVAALDGKRALERARDLIHLSDELAEDFHRVRDDFEQLNRQFRERIIDDEGARGDVLEQLFDGVDVIADS EAGRTFEAFWSLLNDTQQSSQLDQALDALLARGFARKLDRRERAFLRGLTGTLLERGGEVHTVMQHFARSLRGFVQSRGY LEQRRLNQLLKQAQGEALQLRDSLHATTATGYTQPLSSSRLRSLSQWRLHDPRLTQVDGRVQAADAAEISLDSVGDLVAQ SEIDVRSLRNDLHELLGQRPRLTIGDALQQRPAVQGLGSVIGYLSLGTRHGMVIEGQMETVQWEGSDGAVRRARIPLVWF TREKRNELV >Mature_489_residues MKHQARIAGYRQLREQPVWKLLAADHAPELIGLLQTVLMDGERRLPSAVLHARLQRQLDALRADELSRELPRTAQAYLAH WLAQGWLERRLPEGAAEEEYELSRAATQAIRFIVGLRESSSSATESRLSLVIQQLVQLAGQTEADPELRLAALRDERARI DAEIERVASGRVAALDGKRALERARDLIHLSDELAEDFHRVRDDFEQLNRQFRERIIDDEGARGDVLEQLFDGVDVIADS EAGRTFEAFWSLLNDTQQSSQLDQALDALLARGFARKLDRRERAFLRGLTGTLLERGGEVHTVMQHFARSLRGFVQSRGY LEQRRLNQLLKQAQGEALQLRDSLHATTATGYTQPLSSSRLRSLSQWRLHDPRLTQVDGRVQAADAAEISLDSVGDLVAQ SEIDVRSLRNDLHELLGQRPRLTIGDALQQRPAVQGLGSVIGYLSLGTRHGMVIEGQMETVQWEGSDGAVRRARIPLVWF TREKRNELV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 55195; Mature: 55195
Theoretical pI: Translated: 6.53; Mature: 6.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKHQARIAGYRQLREQPVWKLLAADHAPELIGLLQTVLMDGERRLPSAVLHARLQRQLDA CCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH LRADELSRELPRTAQAYLAHWLAQGWLERRLPEGAAEEEYELSRAATQAIRFIVGLRESS HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC SSATESRLSLVIQQLVQLAGQTEADPELRLAALRDERARIDAEIERVASGRVAALDGKRA CHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCHHHH LERARDLIHLSDELAEDFHRVRDDFEQLNRQFRERIIDDEGARGDVLEQLFDGVDVIADS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCHHEEECC EAGRTFEAFWSLLNDTQQSSQLDQALDALLARGFARKLDRRERAFLRGLTGTLLERGGEV CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH HTVMQHFARSLRGFVQSRGYLEQRRLNQLLKQAQGEALQLRDSLHATTATGYTQPLSSSR HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCHHH LRSLSQWRLHDPRLTQVDGRVQAADAAEISLDSVGDLVAQSEIDVRSLRNDLHELLGQRP HHHHHHHCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC RLTIGDALQQRPAVQGLGSVIGYLSLGTRHGMVIEGQMETVQWEGSDGAVRRARIPLVWF CCCHHHHHHHCHHHHHHHHHHHHHHHCCCCCEEEECCCEEEEEECCCCCHHHEECCEEEE TREKRNELV ECHHCCCCC >Mature Secondary Structure MKHQARIAGYRQLREQPVWKLLAADHAPELIGLLQTVLMDGERRLPSAVLHARLQRQLDA CCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH LRADELSRELPRTAQAYLAHWLAQGWLERRLPEGAAEEEYELSRAATQAIRFIVGLRESS HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC SSATESRLSLVIQQLVQLAGQTEADPELRLAALRDERARIDAEIERVASGRVAALDGKRA CHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCHHHH LERARDLIHLSDELAEDFHRVRDDFEQLNRQFRERIIDDEGARGDVLEQLFDGVDVIADS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCHHEEECC EAGRTFEAFWSLLNDTQQSSQLDQALDALLARGFARKLDRRERAFLRGLTGTLLERGGEV CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH HTVMQHFARSLRGFVQSRGYLEQRRLNQLLKQAQGEALQLRDSLHATTATGYTQPLSSSR HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCHHH LRSLSQWRLHDPRLTQVDGRVQAADAAEISLDSVGDLVAQSEIDVRSLRNDLHELLGQRP HHHHHHHCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC RLTIGDALQQRPAVQGLGSVIGYLSLGTRHGMVIEGQMETVQWEGSDGAVRRARIPLVWF CCCHHHHHHHCHHHHHHHHHHHHHHHCCCCCEEEECCCEEEEEECCCCCHHHEECCEEEE TREKRNELV ECHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA