| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
Click here to switch to the map view.
The map label for this gene is 21244957
Identifier: 21244957
GI number: 21244957
Start: 5005881
End: 5006546
Strand: Reverse
Name: 21244957
Synonym: XAC4240
Alternate gene names: NA
Gene position: 5006546-5005881 (Counterclockwise)
Preceding gene: 21244958
Following gene: 21244956
Centisome position: 96.73
GC content: 71.47
Gene sequence:
>666_bases ATGTCTTCGCACTGGTCTGAGCCGATGAACGCCACCGATGCCCTGCGCGACACCTGGCTGCAGACCCGCGAACGGCTGCA GGCGACCCACTTGCTCGGCGACGATGACGCGGCCCTGTCGGTGCGTTGCCCGGGCGCAACGCAGATGTGGATCGGCAGCG CCGCGGCGCCAACGCCGCTGCTGCTGGATTGGCGCGAGGATGCCGCGCTGGAGGCGGCGCAGCGTCTGCATGCGCAGGTC TATGCGCAGCGTGGCGATGTGGGGGCGGTGGCCTGGTCGGCCGGTGCGTTCGGCCACTGCCTGGCCGACGTCGGCGGCGC CTTGCCGCAGGTGTTCGACGAACAGGCGCGGCATCTGGGGCCGATGCCGCCGCCGGTACGCGCGGCCGACGCGGCGGCCG TGCTGGCCAGCGGGATCGGCAACGCCGTGCTGGTGGCGCGGCGGCCGTTGTGCCTGGGGACCAGTGCGCGTCGCTTGGCG CTGAACATCGCGTTGTTCGAAAAGTGCGCCAAGGCGTATGTGCTGGCGGCGGCGACCGGAGGACCGAGCCGGCAGTTGCC GTGGTGGGTGCGTCGCATCGCCAACGGGCGTCTGCGCAAGGACCAGGTGCGTGCGGCGGTCGCATTCGCCAATGGCGCCC TGCCCACCGAAAGCACGGCTTACTGA
Upstream 100 bases:
>100_bases TATTCGGCGCACGGCCTGATCACCCTGGCCGGCAGCCGCATCTACACCAGCATGGCCGACACCGATGCGGTGATCGACGA GGCCTTGAACCGTTTCGACG
Downstream 100 bases:
>100_bases AGGCATCTCATGCGCAGCCCTCATCCACCCGTATTGTCCGCCGTGGCCTTTCCCGCGTCGCAGGGGTTGCCGTCCGGTCT GTCGATCGGTTCGATCGCCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 221; Mature: 220
Protein sequence:
>221_residues MSSHWSEPMNATDALRDTWLQTRERLQATHLLGDDDAALSVRCPGATQMWIGSAAAPTPLLLDWREDAALEAAQRLHAQV YAQRGDVGAVAWSAGAFGHCLADVGGALPQVFDEQARHLGPMPPPVRAADAAAVLASGIGNAVLVARRPLCLGTSARRLA LNIALFEKCAKAYVLAAATGGPSRQLPWWVRRIANGRLRKDQVRAAVAFANGALPTESTAY
Sequences:
>Translated_221_residues MSSHWSEPMNATDALRDTWLQTRERLQATHLLGDDDAALSVRCPGATQMWIGSAAAPTPLLLDWREDAALEAAQRLHAQV YAQRGDVGAVAWSAGAFGHCLADVGGALPQVFDEQARHLGPMPPPVRAADAAAVLASGIGNAVLVARRPLCLGTSARRLA LNIALFEKCAKAYVLAAATGGPSRQLPWWVRRIANGRLRKDQVRAAVAFANGALPTESTAY >Mature_220_residues SSHWSEPMNATDALRDTWLQTRERLQATHLLGDDDAALSVRCPGATQMWIGSAAAPTPLLLDWREDAALEAAQRLHAQVY AQRGDVGAVAWSAGAFGHCLADVGGALPQVFDEQARHLGPMPPPVRAADAAAVLASGIGNAVLVARRPLCLGTSARRLAL NIALFEKCAKAYVLAAATGGPSRQLPWWVRRIANGRLRKDQVRAAVAFANGALPTESTAY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23494; Mature: 23363
Theoretical pI: Translated: 8.66; Mature: 8.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSHWSEPMNATDALRDTWLQTRERLQATHLLGDDDAALSVRCPGATQMWIGSAAAPTPL CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHCCCCCCCCCE LLDWREDAALEAAQRLHAQVYAQRGDVGAVAWSAGAFGHCLADVGGALPQVFDEQARHLG EEECCHHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHCCHHHHHHHHHHHHCC PMPPPVRAADAAAVLASGIGNAVLVARRPLCLGTSARRLALNIALFEKCAKAYVLAAATG CCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHEEEEEECC GPSRQLPWWVRRIANGRLRKDQVRAAVAFANGALPTESTAY CCCCCCCHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure SSHWSEPMNATDALRDTWLQTRERLQATHLLGDDDAALSVRCPGATQMWIGSAAAPTPL CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHCCCCCCCCCE LLDWREDAALEAAQRLHAQVYAQRGDVGAVAWSAGAFGHCLADVGGALPQVFDEQARHLG EEECCHHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHCCHHHHHHHHHHHHCC PMPPPVRAADAAAVLASGIGNAVLVARRPLCLGTSARRLALNIALFEKCAKAYVLAAATG CCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHEEEEEECC GPSRQLPWWVRRIANGRLRKDQVRAAVAFANGALPTESTAY CCCCCCCHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA