| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21244956
Identifier: 21244956
GI number: 21244956
Start: 5004660
End: 5005766
Strand: Reverse
Name: 21244956
Synonym: XAC4239
Alternate gene names: NA
Gene position: 5005766-5004660 (Counterclockwise)
Preceding gene: 21244957
Following gene: 21244955
Centisome position: 96.72
GC content: 72.27
Gene sequence:
>1107_bases GTGCAGCCGATCCTGCTGGGAACATTGGTCGAGCAGAAGCTGATCACGCTCTCCGGCGTGGGCATCGTGGCGATGGGGGA GATCGTCGCGCTCGGCCTGGGCGTGGCGCTGGGCGATGCGCTGTTGCCGCACCGCTGGCAACGTCAGGTCGCGGTGCTGG CGGCGCTGTTGGCGGCACTGCTGGATCTGGCCACCACCCAGGCGGTCGGCGACACCGCGTTCGTGCTGGTACGTGCAGCT GCCGGCCTGGCGGAGGGGCTGCTGCTGTGGGTGGCGACCCTGACCATCGTGCGTGCGGCCAAGCCGGATCGGGTCACCGC GGTGTTCATGCTGACCCAGGCGGTGGCGCAGATCGCATTGGCGAACCTGCTGGCGTGGTGGGTGCTGCCGTCCACCGGCT GGAAAGGCGGCTTCGTGGCGCTGGGCGCGGTGACGCTGTGCGCGGCGCTGTTGGCACCGTTGCTGCCGGCGACCTTGTCT GCCGTGAGCGCAACCGCGCCGGCGAGCCACGTGCGCTGGTCGCCGACAACCCTGTTGCCCTTGCTGATCGCCTTCGTGCA GATGGCCGCGATCGGCGCGCTGTGGGCGTACCTGGAACCGTTGGGGCTGCGCGCCGGCCTGGATGCCGGGGCGGTGCAGG CGCACACCTCGCTGGTGCTGACGCTGCAGATCGTCGGCGCGCTGGCGGCGATCTGGTGGGTGCGCCGGCTCGGTCACGCG CGCACCCTGGTGGTCGGCAGCCTGGTGCTGGCGGCGGTGGCGGCCACCATGGCGCGTGCGGCGCCGGCCGGCACTGCCGC GTTCACGGTTGCCTGCGTGGGCTTCGGCCTGGTCTGGATGTTCCTGATGCCCTTCCACGTGGGTCTGGCGTTCGATGCCG ACGCGCATGGCCGGGTGGCGGTGCTGGTGCCGGCGGTGCAGTTGCTGGGATCGGCAGCCGGCCCCTTGCTCGCGTCGCTG CTGCTGCAGCACGATGATCCGGCCCCGGTACCGGTCTTCAGTCTGGCCGCCGCACTGCTGGCGGCCGTCCTGGCGGCGGC TGCCGGCCGCGACCAGCGCCACCACGCGCCGCCGACCGGGGCCCAGCCGAGCAAGGGGGATCGATGA
Upstream 100 bases:
>100_bases CAGCCCTCATCCACCCGTATTGTCCGCCGTGGCCTTTCCCGCGTCGCAGGGGTTGCCGTCCGGTCTGTCGATCGGTTCGA TCGCCCTGCTCATCCTGGGC
Downstream 100 bases:
>100_bases TCGACAGCGTGTGCGGGATAGGCCGCAGCGCGCCGCCGCGTCTGGCGCGCCGGCCGCGGTGCCGTTTCCAGTGTGTGCGC TTGCAGCAGGGGCGTGCGCG
Product: transmembrane protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 368; Mature: 368
Protein sequence:
>368_residues MQPILLGTLVEQKLITLSGVGIVAMGEIVALGLGVALGDALLPHRWQRQVAVLAALLAALLDLATTQAVGDTAFVLVRAA AGLAEGLLLWVATLTIVRAAKPDRVTAVFMLTQAVAQIALANLLAWWVLPSTGWKGGFVALGAVTLCAALLAPLLPATLS AVSATAPASHVRWSPTTLLPLLIAFVQMAAIGALWAYLEPLGLRAGLDAGAVQAHTSLVLTLQIVGALAAIWWVRRLGHA RTLVVGSLVLAAVAATMARAAPAGTAAFTVACVGFGLVWMFLMPFHVGLAFDADAHGRVAVLVPAVQLLGSAAGPLLASL LLQHDDPAPVPVFSLAAALLAAVLAAAAGRDQRHHAPPTGAQPSKGDR
Sequences:
>Translated_368_residues MQPILLGTLVEQKLITLSGVGIVAMGEIVALGLGVALGDALLPHRWQRQVAVLAALLAALLDLATTQAVGDTAFVLVRAA AGLAEGLLLWVATLTIVRAAKPDRVTAVFMLTQAVAQIALANLLAWWVLPSTGWKGGFVALGAVTLCAALLAPLLPATLS AVSATAPASHVRWSPTTLLPLLIAFVQMAAIGALWAYLEPLGLRAGLDAGAVQAHTSLVLTLQIVGALAAIWWVRRLGHA RTLVVGSLVLAAVAATMARAAPAGTAAFTVACVGFGLVWMFLMPFHVGLAFDADAHGRVAVLVPAVQLLGSAAGPLLASL LLQHDDPAPVPVFSLAAALLAAVLAAAAGRDQRHHAPPTGAQPSKGDR >Mature_368_residues MQPILLGTLVEQKLITLSGVGIVAMGEIVALGLGVALGDALLPHRWQRQVAVLAALLAALLDLATTQAVGDTAFVLVRAA AGLAEGLLLWVATLTIVRAAKPDRVTAVFMLTQAVAQIALANLLAWWVLPSTGWKGGFVALGAVTLCAALLAPLLPATLS AVSATAPASHVRWSPTTLLPLLIAFVQMAAIGALWAYLEPLGLRAGLDAGAVQAHTSLVLTLQIVGALAAIWWVRRLGHA RTLVVGSLVLAAVAATMARAAPAGTAAFTVACVGFGLVWMFLMPFHVGLAFDADAHGRVAVLVPAVQLLGSAAGPLLASL LLQHDDPAPVPVFSLAAALLAAVLAAAAGRDQRHHAPPTGAQPSKGDR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37581; Mature: 37581
Theoretical pI: Translated: 10.03; Mature: 10.03
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQPILLGTLVEQKLITLSGVGIVAMGEIVALGLGVALGDALLPHRWQRQVAVLAALLAAL CCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH LDLATTQAVGDTAFVLVRAAAGLAEGLLLWVATLTIVRAAKPDRVTAVFMLTQAVAQIAL HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH ANLLAWWVLPSTGWKGGFVALGAVTLCAALLAPLLPATLSAVSATAPASHVRWSPTTLLP HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHH LLIAFVQMAAIGALWAYLEPLGLRAGLDAGAVQAHTSLVLTLQIVGALAAIWWVRRLGHA HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH RTLVVGSLVLAAVAATMARAAPAGTAAFTVACVGFGLVWMFLMPFHVGLAFDADAHGRVA HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCEEECCCCCCCEE VLVPAVQLLGSAAGPLLASLLLQHDDPAPVPVFSLAAALLAAVLAAAAGRDQRHHAPPTG HHHHHHHHHHCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC AQPSKGDR CCCCCCCC >Mature Secondary Structure MQPILLGTLVEQKLITLSGVGIVAMGEIVALGLGVALGDALLPHRWQRQVAVLAALLAAL CCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH LDLATTQAVGDTAFVLVRAAAGLAEGLLLWVATLTIVRAAKPDRVTAVFMLTQAVAQIAL HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH ANLLAWWVLPSTGWKGGFVALGAVTLCAALLAPLLPATLSAVSATAPASHVRWSPTTLLP HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHH LLIAFVQMAAIGALWAYLEPLGLRAGLDAGAVQAHTSLVLTLQIVGALAAIWWVRRLGHA HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH RTLVVGSLVLAAVAATMARAAPAGTAAFTVACVGFGLVWMFLMPFHVGLAFDADAHGRVA HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCEEECCCCCCCEE VLVPAVQLLGSAAGPLLASLLLQHDDPAPVPVFSLAAALLAAVLAAAAGRDQRHHAPPTG HHHHHHHHHHCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC AQPSKGDR CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA