| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21244892
Identifier: 21244892
GI number: 21244892
Start: 4908575
End: 4909744
Strand: Reverse
Name: 21244892
Synonym: XAC4175
Alternate gene names: NA
Gene position: 4909744-4908575 (Counterclockwise)
Preceding gene: 161485705
Following gene: 21244891
Centisome position: 94.86
GC content: 61.11
Gene sequence:
>1170_bases ATGGTGTCGACCCATCGGTCCTCGTCACTGGTGCTGCACCTTCCTTCCTTCCTTCTGGATACGAGAGACATGACGACTTC TTGTAAGACCCATCCGCTGGCCCGTGCATGCAGGCTCGTTGGAACGCTTGCGCTATTGGCAGCCCTGCCACAGTTGGCGA TGGCAGCCTGTAACGACTCCACCGCAAATAAAATGGATGCCATCCTGTTCAATGGCGCCGACAAGACCACGGTTCTGGCG CATCGCGGCCTATGGGGGAAATACGCCGGGATCGCCGATCTGCCGGAGAACTCGCGCGGCGCGTTGCAGGCTGCCAACGA CCAGTGCATGGATGGCGTGGAGTTGGACGTCAAGCTCACCAGCGACGGTGTGCCGGTCCTGTTGCACGACTACAACCTTG GCCGTACCACCACGGTGTGGCAGCAGCACCCCGGCGTCAAATACGACCCCATCACCAACCAGGGCGTGAACCCATCAGTC CTGGTGACGCCCTGGTCGCAGGTCAGCGCGCTCTTTCTGTTGAGCCCGGACCGCACCACCATTACCGGCTATCACGTGCC GCGCGTCGATGACGTGTTCGCCTATTACAAGCAGCACAACCTGCGCACTCCGATGGTGTTCGACATCAAGGATGCGGCGA CGGTACGGGCCGTCCGCAGGGCAGCCGAAGGCGCGTTCGGGGTGGCGTCCGGCAGCTATGTCGCCGCCAAGGTCAATGCA ACGCTATACACCAGTCGCGATGCCTACCGTGCCGACGGTAGCGGCATGGTCGGCATTCCGGTGTTCACCACCAACATGCT CGGCAAGATCAACGTGCGCCAGACGATCTCGGCGTGGATGAACGACGGCCAGCAGACGATGGAGATCAACGTCAAGCAGC TCGGTGGCTTGTTGCAAAGCGATGCCGACTTCATTCGTGAGCGCGGTTATCGCGTCGGCGTATTCCAGGCCATTCCCGAC GGTCCGTATGCCGGCAAGTTCTATCAGAACAGCGGCGCGTGCTGCTACGCCTTGTCGGACCTGTATTTCTCCTACTCCGG TGGCCGCGACACCGCCGACAATCGCGGCAGTCTGGATTTCATTACGCGCGACGAGGACTTTCGCCTGATCACCACCGATG ACCCGAAGGGCGCCATCGCTTATCTGCGTGCGCGCGGCAAGCACGAATAA
Upstream 100 bases:
>100_bases GACTAAGTTTCCCGCCGAGTCGACCGCCGATCACGGCCGGCTCGCCCTCGCTCACCGTCTTTGGTCGGTCGAGTGAGGGC GCGGTCCGGCGAATGCATCG
Downstream 100 bases:
>100_bases TGGATGCATCTGGTTGGCCCACGGGCCGAACCCGACGGCGGCGCTGACCGCCGTCGGTTCTTGTCTAACGGAGGTTGTCT CATGGTTTCCCCACGTGTGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 389; Mature: 389
Protein sequence:
>389_residues MVSTHRSSSLVLHLPSFLLDTRDMTTSCKTHPLARACRLVGTLALLAALPQLAMAACNDSTANKMDAILFNGADKTTVLA HRGLWGKYAGIADLPENSRGALQAANDQCMDGVELDVKLTSDGVPVLLHDYNLGRTTTVWQQHPGVKYDPITNQGVNPSV LVTPWSQVSALFLLSPDRTTITGYHVPRVDDVFAYYKQHNLRTPMVFDIKDAATVRAVRRAAEGAFGVASGSYVAAKVNA TLYTSRDAYRADGSGMVGIPVFTTNMLGKINVRQTISAWMNDGQQTMEINVKQLGGLLQSDADFIRERGYRVGVFQAIPD GPYAGKFYQNSGACCYALSDLYFSYSGGRDTADNRGSLDFITRDEDFRLITTDDPKGAIAYLRARGKHE
Sequences:
>Translated_389_residues MVSTHRSSSLVLHLPSFLLDTRDMTTSCKTHPLARACRLVGTLALLAALPQLAMAACNDSTANKMDAILFNGADKTTVLA HRGLWGKYAGIADLPENSRGALQAANDQCMDGVELDVKLTSDGVPVLLHDYNLGRTTTVWQQHPGVKYDPITNQGVNPSV LVTPWSQVSALFLLSPDRTTITGYHVPRVDDVFAYYKQHNLRTPMVFDIKDAATVRAVRRAAEGAFGVASGSYVAAKVNA TLYTSRDAYRADGSGMVGIPVFTTNMLGKINVRQTISAWMNDGQQTMEINVKQLGGLLQSDADFIRERGYRVGVFQAIPD GPYAGKFYQNSGACCYALSDLYFSYSGGRDTADNRGSLDFITRDEDFRLITTDDPKGAIAYLRARGKHE >Mature_389_residues MVSTHRSSSLVLHLPSFLLDTRDMTTSCKTHPLARACRLVGTLALLAALPQLAMAACNDSTANKMDAILFNGADKTTVLA HRGLWGKYAGIADLPENSRGALQAANDQCMDGVELDVKLTSDGVPVLLHDYNLGRTTTVWQQHPGVKYDPITNQGVNPSV LVTPWSQVSALFLLSPDRTTITGYHVPRVDDVFAYYKQHNLRTPMVFDIKDAATVRAVRRAAEGAFGVASGSYVAAKVNA TLYTSRDAYRADGSGMVGIPVFTTNMLGKINVRQTISAWMNDGQQTMEINVKQLGGLLQSDADFIRERGYRVGVFQAIPD GPYAGKFYQNSGACCYALSDLYFSYSGGRDTADNRGSLDFITRDEDFRLITTDDPKGAIAYLRARGKHE
Specific function: Unknown
COG id: COG0584
COG function: function code C; Glycerophosphoryl diester phosphodiesterase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42434; Mature: 42434
Theoretical pI: Translated: 7.86; Mature: 7.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVSTHRSSSLVLHLPSFLLDTRDMTTSCKTHPLARACRLVGTLALLAALPQLAMAACNDS CCCCCCCCEEEEECHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC TANKMDAILFNGADKTTVLAHRGLWGKYAGIADLPENSRGALQAANDQCMDGVELDVKLT CCCCEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCEEECCCCCCCCEEEEEEEC SDGVPVLLHDYNLGRTTTVWQQHPGVKYDPITNQGVNPSVLVTPWSQVSALFLLSPDRTT CCCCEEEEEECCCCCEEEEHHCCCCCEECCCCCCCCCCCEEEECHHHEEEEEEECCCCEE ITGYHVPRVDDVFAYYKQHNLRTPMVFDIKDAATVRAVRRAAEGAFGVASGSYVAAKVNA EEEEECCCHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHCCCCEECCCCEEEEEEEE TLYTSRDAYRADGSGMVGIPVFTTNMLGKINVRQTISAWMNDGQQTMEINVKQLGGLLQS EEEECCCCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHCCCCEEEEEEHHHHCCHHHH DADFIRERGYRVGVFQAIPDGPYAGKFYQNSGACCYALSDLYFSYSGGRDTADNRGSLDF HHHHHHHCCCEEEEEEECCCCCCCCCEECCCCCEEEEEEEHEEEECCCCCCCCCCCCEEE ITRDEDFRLITTDDPKGAIAYLRARGKHE EECCCCEEEEECCCCCCCEEEEECCCCCC >Mature Secondary Structure MVSTHRSSSLVLHLPSFLLDTRDMTTSCKTHPLARACRLVGTLALLAALPQLAMAACNDS CCCCCCCCEEEEECHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC TANKMDAILFNGADKTTVLAHRGLWGKYAGIADLPENSRGALQAANDQCMDGVELDVKLT CCCCEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCEEECCCCCCCCEEEEEEEC SDGVPVLLHDYNLGRTTTVWQQHPGVKYDPITNQGVNPSVLVTPWSQVSALFLLSPDRTT CCCCEEEEEECCCCCEEEEHHCCCCCEECCCCCCCCCCCEEEECHHHEEEEEEECCCCEE ITGYHVPRVDDVFAYYKQHNLRTPMVFDIKDAATVRAVRRAAEGAFGVASGSYVAAKVNA EEEEECCCHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHCCCCEECCCCEEEEEEEE TLYTSRDAYRADGSGMVGIPVFTTNMLGKINVRQTISAWMNDGQQTMEINVKQLGGLLQS EEEECCCCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHCCCCEEEEEEHHHHCCHHHH DADFIRERGYRVGVFQAIPDGPYAGKFYQNSGACCYALSDLYFSYSGGRDTADNRGSLDF HHHHHHHCCCEEEEEEECCCCCCCCCEECCCCCEEEEEEEHEEEECCCCCCCCCCCCEEE ITRDEDFRLITTDDPKGAIAYLRARGKHE EECCCCEEEEECCCCCCCEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA