Definition Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome.
Accession NC_003919
Length 5,175,554

Click here to switch to the map view.

The map label for this gene is 21244880

Identifier: 21244880

GI number: 21244880

Start: 4895875

End: 4896258

Strand: Reverse

Name: 21244880

Synonym: XAC4163

Alternate gene names: NA

Gene position: 4896258-4895875 (Counterclockwise)

Preceding gene: 21244881

Following gene: 21244879

Centisome position: 94.6

GC content: 70.31

Gene sequence:

>384_bases
ATGCTGCTCCGCCGCGCCCGTCGATTGCCTCCCTTGCTGCGCCTGATGGCGTTGCTGGTGCTGGTCATGGGCGTACTGGT
CGCACCGGTCGCCTGCGCACTGGGCGATGTGCATACGCTGGCGCACGACCAGGCGCACCTGGACGACACCGCACCGCATG
GCCATGACGGCGCCGACGAAGGCGATGCCGGCGAGCGCGACGGTGCGGGTTTGCTGCATGCCTTGATGCACAGCGGCTAC
TGCCACGGGCACAGCCCGGCCATGCTGCCGGCGTTGGCCTGGGGTCCGTTGCCTGCGCGCACGCACGGGCAGCCGCCCGT
GCTGACCACCGCCTACCGCTCGCATCTGAGCGAGACCGGATTGCGTCCTCCGATCGCGGCCTGA

Upstream 100 bases:

>100_bases
GCTGACCCGGACGGCGTCGCGGCCAGGTCCGCTCTACGATGCTGCGCGCCAGACCGTGCATGCGATTGTGTAACTCCCCC
GGCCTCTATACGCTGCGCCC

Downstream 100 bases:

>100_bases
TGCATCGCCGGCAGCTGCCGGCCTGTCCATCGATCCCGATTCCGGAGACACCCTCATGTGGTTGCGACTGACGGCGCTTG
CCGTCTTCGCGGTGGTGCCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 127; Mature: 127

Protein sequence:

>127_residues
MLLRRARRLPPLLRLMALLVLVMGVLVAPVACALGDVHTLAHDQAHLDDTAPHGHDGADEGDAGERDGAGLLHALMHSGY
CHGHSPAMLPALAWGPLPARTHGQPPVLTTAYRSHLSETGLRPPIAA

Sequences:

>Translated_127_residues
MLLRRARRLPPLLRLMALLVLVMGVLVAPVACALGDVHTLAHDQAHLDDTAPHGHDGADEGDAGERDGAGLLHALMHSGY
CHGHSPAMLPALAWGPLPARTHGQPPVLTTAYRSHLSETGLRPPIAA
>Mature_127_residues
MLLRRARRLPPLLRLMALLVLVMGVLVAPVACALGDVHTLAHDQAHLDDTAPHGHDGADEGDAGERDGAGLLHALMHSGY
CHGHSPAMLPALAWGPLPARTHGQPPVLTTAYRSHLSETGLRPPIAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13381; Mature: 13381

Theoretical pI: Translated: 7.13; Mature: 7.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLRRARRLPPLLRLMALLVLVMGVLVAPVACALGDVHTLAHDQAHLDDTAPHGHDGADE
CCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
GDAGERDGAGLLHALMHSGYCHGHSPAMLPALAWGPLPARTHGQPPVLTTAYRSHLSETG
CCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCC
LRPPIAA
CCCCCCC
>Mature Secondary Structure
MLLRRARRLPPLLRLMALLVLVMGVLVAPVACALGDVHTLAHDQAHLDDTAPHGHDGADE
CCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
GDAGERDGAGLLHALMHSGYCHGHSPAMLPALAWGPLPARTHGQPPVLTTAYRSHLSETG
CCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCC
LRPPIAA
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA