| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21244881
Identifier: 21244881
GI number: 21244881
Start: 4896496
End: 4898340
Strand: Reverse
Name: 21244881
Synonym: XAC4164
Alternate gene names: NA
Gene position: 4898340-4896496 (Counterclockwise)
Preceding gene: 77748759
Following gene: 21244880
Centisome position: 94.64
GC content: 67.1
Gene sequence:
>1845_bases GTGACCTCTCCGCTCGCCGCCGCACTCTCGCTCGCCCTGCTGGGCGCAGGCTTTGCCGCCACCTCGGCGCAGGCCGCCAC CCCACCCGCCCCGGCCACGCTCACCGCCGAGGCACCGGCCGACGCGCGCTTCCGCGCGATCTACGAGAAAGAGTGGGCCT GGCGCCAGGCCGAGACCGGCCAGGCCGACGAAGACAGCGACACCACCGGCGACAACACCCATCTGCCCGATGTCAGCGCA ACCGCGCAGCAGGCGCGTCTGGCCGTGTGGGACGGCGTACTCAAGCAGCTCGACGGCATCGACCCCAAGCAGCTCTCGCC CGCCAACCAGATCAACTTCGCCATCTACCGCCCGCAGGTGGAGAACCTGGCGGCCGAAGTGCGTCTGCGCCTGTACGAAA TGCCGTTCAATTCGGATAGCTCGTTCTGGTCGAATCTGGGTTTCATGGCGCAGCGGCCGATGAAGACCGCGGCCGAGTAC CGCGCCTACATCGCGCGCCTGAACGATGTACCGCGCTATTTCGAGCAGCAGACGGTCAACATGCGCGCCGGCCTGGCACG CGGATTCAGCGTGCCGCGTGCCGTGCTCGACGGGCGCGATGTCTCCATCGCCACCGTGGCCGATGTCAAAGACCCCACCG AATCGACCTTCTACGCGCCGTTCAAGCAACTGCCTGCGCAGATCCCGGCGGCCGAGCAGGCGCAACTGCGCCAACAGGCC AAGGCCGCGTTGCGCACCGCCGTCCTTCCGGCGTACAGCAAGCTGCTGACGTTCTTCCGCAACGACTACATGCCCAAGGC ACGCACCACGCTGGCGGCCGAAGCATTGCCCGACGGCAAGGCGTTCTATCGCCAGCAGATCCGCGAATACACCACGCTGG AGCTGAGTCCCGAGCAGATCCACCAGATCGGCCTGGACGAAGTGGCGCGCATCCAGACCCAGATGAACGCCATCATCCAG CAGGTGGGTTTCAAGGGCAGCTTCGCGCAGTTCCTGGCCTTCCTGCGCACCGACCCGCAGTTCTACGCCAAGACCCCGCA GGAGTTGCTCGATCGCGCCGCATGGATTTCCAAGCGCGTGGACGGGCAGGTGGGCAAGTTCATCGGCACGCTGCCGCGCG GGCGCTTCACCATCAAGCCGGTGCCCGACGATATCGCCCCGTTCTGGACCGCCGGCCGCGGCGGTGCCACCACCTACTGG GTCAACACCTACAACCTGCCGTCGCGGCCGCTGTACAACCTGCCGGCGCTGACCCTGCACGAGTCCTCGCCCGGTCACTC GCTGCAGGGGTCGCTGGCGCTGGAGCAGGGCGAGCAACCGGCGTTCCGGCGCGAGAACTACATTTCCGCCTACGGCGAAG GTTGGGCGCTGTACACCGAAAAGCTCGGCCAGGAGATGGGCATCTACGAAACCCCATACGAAGAATTCGGCCGGCTCACC TACGAGATGTGGCGCGCCTGCCGGTTGGTGATCGACACCGGGGTGCACCATGACGGCTGGAGCCGCGAGCAGGCACTGGC CTATCTGCGCGACCGCACCGCGCTCAGCGAGCACGAAGTCACCACCGAAGTGGACCGCTACATCTCCTGGCCCGGCCAGG CGCTGAGCTACAAGCTGGGCGAGATCACCATCGTCAAGCTGCGCGCCGAGGCAGAAAAGGAGCTGGGTGACCGCTTCGAC ATCAAGGCCTTCCACGATGTGGTGCTGCGCCAGGGCTCGGTCACCCTGCCGGTGCTGGAGCAGCAGGTGCGCGCCTTCAT CGCCGAAAGCAAGGCGCGCCCGGCAACGTCCAACAAGCCCAGCGCCGCCGCGCCCCGACCCTGGCCAACGGTCCGCTCCC CGTAG
Upstream 100 bases:
>100_bases CCATGCCCCTGCACCAGCCCGTGTTGGGACTTCCGGCCCATGGCAGCGCGGCCGGCGGCTGCCATGATCGAGCGTTCGCT CCAGATCAGGCTTTCCGCAC
Downstream 100 bases:
>100_bases GAGCGGACCCGGCCGCGCTGCCGTCCCGCTCCTGGCGCCGTTCTGGCCTCGATCCCAGTTCCAGGTCATCGTCGGCCGCT TTTCGCCTGCCCGGTCGCTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 614; Mature: 613
Protein sequence:
>614_residues MTSPLAAALSLALLGAGFAATSAQAATPPAPATLTAEAPADARFRAIYEKEWAWRQAETGQADEDSDTTGDNTHLPDVSA TAQQARLAVWDGVLKQLDGIDPKQLSPANQINFAIYRPQVENLAAEVRLRLYEMPFNSDSSFWSNLGFMAQRPMKTAAEY RAYIARLNDVPRYFEQQTVNMRAGLARGFSVPRAVLDGRDVSIATVADVKDPTESTFYAPFKQLPAQIPAAEQAQLRQQA KAALRTAVLPAYSKLLTFFRNDYMPKARTTLAAEALPDGKAFYRQQIREYTTLELSPEQIHQIGLDEVARIQTQMNAIIQ QVGFKGSFAQFLAFLRTDPQFYAKTPQELLDRAAWISKRVDGQVGKFIGTLPRGRFTIKPVPDDIAPFWTAGRGGATTYW VNTYNLPSRPLYNLPALTLHESSPGHSLQGSLALEQGEQPAFRRENYISAYGEGWALYTEKLGQEMGIYETPYEEFGRLT YEMWRACRLVIDTGVHHDGWSREQALAYLRDRTALSEHEVTTEVDRYISWPGQALSYKLGEITIVKLRAEAEKELGDRFD IKAFHDVVLRQGSVTLPVLEQQVRAFIAESKARPATSNKPSAAAPRPWPTVRSP
Sequences:
>Translated_614_residues MTSPLAAALSLALLGAGFAATSAQAATPPAPATLTAEAPADARFRAIYEKEWAWRQAETGQADEDSDTTGDNTHLPDVSA TAQQARLAVWDGVLKQLDGIDPKQLSPANQINFAIYRPQVENLAAEVRLRLYEMPFNSDSSFWSNLGFMAQRPMKTAAEY RAYIARLNDVPRYFEQQTVNMRAGLARGFSVPRAVLDGRDVSIATVADVKDPTESTFYAPFKQLPAQIPAAEQAQLRQQA KAALRTAVLPAYSKLLTFFRNDYMPKARTTLAAEALPDGKAFYRQQIREYTTLELSPEQIHQIGLDEVARIQTQMNAIIQ QVGFKGSFAQFLAFLRTDPQFYAKTPQELLDRAAWISKRVDGQVGKFIGTLPRGRFTIKPVPDDIAPFWTAGRGGATTYW VNTYNLPSRPLYNLPALTLHESSPGHSLQGSLALEQGEQPAFRRENYISAYGEGWALYTEKLGQEMGIYETPYEEFGRLT YEMWRACRLVIDTGVHHDGWSREQALAYLRDRTALSEHEVTTEVDRYISWPGQALSYKLGEITIVKLRAEAEKELGDRFD IKAFHDVVLRQGSVTLPVLEQQVRAFIAESKARPATSNKPSAAAPRPWPTVRSP >Mature_613_residues TSPLAAALSLALLGAGFAATSAQAATPPAPATLTAEAPADARFRAIYEKEWAWRQAETGQADEDSDTTGDNTHLPDVSAT AQQARLAVWDGVLKQLDGIDPKQLSPANQINFAIYRPQVENLAAEVRLRLYEMPFNSDSSFWSNLGFMAQRPMKTAAEYR AYIARLNDVPRYFEQQTVNMRAGLARGFSVPRAVLDGRDVSIATVADVKDPTESTFYAPFKQLPAQIPAAEQAQLRQQAK AALRTAVLPAYSKLLTFFRNDYMPKARTTLAAEALPDGKAFYRQQIREYTTLELSPEQIHQIGLDEVARIQTQMNAIIQQ VGFKGSFAQFLAFLRTDPQFYAKTPQELLDRAAWISKRVDGQVGKFIGTLPRGRFTIKPVPDDIAPFWTAGRGGATTYWV NTYNLPSRPLYNLPALTLHESSPGHSLQGSLALEQGEQPAFRRENYISAYGEGWALYTEKLGQEMGIYETPYEEFGRLTY EMWRACRLVIDTGVHHDGWSREQALAYLRDRTALSEHEVTTEVDRYISWPGQALSYKLGEITIVKLRAEAEKELGDRFDI KAFHDVVLRQGSVTLPVLEQQVRAFIAESKARPATSNKPSAAAPRPWPTVRSP
Specific function: Unknown
COG id: COG4805
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 68473; Mature: 68342
Theoretical pI: Translated: 6.98; Mature: 6.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSPLAAALSLALLGAGFAATSAQAATPPAPATLTAEAPADARFRAIYEKEWAWRQAETG CCCHHHHHHHHHHHHCCHHHCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHCCCCC QADEDSDTTGDNTHLPDVSATAQQARLAVWDGVLKQLDGIDPKQLSPANQINFAIYRPQV CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCEEEEECCHH ENLAAEVRLRLYEMPFNSDSSFWSNLGFMAQRPMKTAAEYRAYIARLNDVPRYFEQQTVN HHHHHHHHHHHEECCCCCCCHHHHHCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHH MRAGLARGFSVPRAVLDGRDVSIATVADVKDPTESTFYAPFKQLPAQIPAAEQAQLRQQA HHHHHHHCCCCCHHHHCCCCCEEEEEECCCCCCCCCEECCHHHCCCCCCCHHHHHHHHHH KAALRTAVLPAYSKLLTFFRNDYMPKARTTLAAEALPDGKAFYRQQIREYTTLELSPEQI HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHEECCCHHHH HQIGLDEVARIQTQMNAIIQQVGFKGSFAQFLAFLRTDPQFYAKTPQELLDRAAWISKRV HHCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHH DGQVGKFIGTLPRGRFTIKPVPDDIAPFWTAGRGGATTYWVNTYNLPSRPLYNLPALTLH CCHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCEEEEE ESSPGHSLQGSLALEQGEQPAFRRENYISAYGEGWALYTEKLGQEMGIYETPYEEFGRLT CCCCCCCCCCCEECCCCCCCCHHHHCHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHH YEMWRACRLVIDTGVHHDGWSREQALAYLRDRTALSEHEVTTEVDRYISWPGQALSYKLG HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHEEECC EITIVKLRAEAEKELGDRFDIKAFHDVVLRQGSVTLPVLEQQVRAFIAESKARPATSNKP CEEEEEEECHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCC SAAAPRPWPTVRSP CCCCCCCCCCCCCC >Mature Secondary Structure TSPLAAALSLALLGAGFAATSAQAATPPAPATLTAEAPADARFRAIYEKEWAWRQAETG CCHHHHHHHHHHHHCCHHHCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHCCCCC QADEDSDTTGDNTHLPDVSATAQQARLAVWDGVLKQLDGIDPKQLSPANQINFAIYRPQV CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCEEEEECCHH ENLAAEVRLRLYEMPFNSDSSFWSNLGFMAQRPMKTAAEYRAYIARLNDVPRYFEQQTVN HHHHHHHHHHHEECCCCCCCHHHHHCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHH MRAGLARGFSVPRAVLDGRDVSIATVADVKDPTESTFYAPFKQLPAQIPAAEQAQLRQQA HHHHHHHCCCCCHHHHCCCCCEEEEEECCCCCCCCCEECCHHHCCCCCCCHHHHHHHHHH KAALRTAVLPAYSKLLTFFRNDYMPKARTTLAAEALPDGKAFYRQQIREYTTLELSPEQI HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHEECCCHHHH HQIGLDEVARIQTQMNAIIQQVGFKGSFAQFLAFLRTDPQFYAKTPQELLDRAAWISKRV HHCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHH DGQVGKFIGTLPRGRFTIKPVPDDIAPFWTAGRGGATTYWVNTYNLPSRPLYNLPALTLH CCHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCEEEEE ESSPGHSLQGSLALEQGEQPAFRRENYISAYGEGWALYTEKLGQEMGIYETPYEEFGRLT CCCCCCCCCCCEECCCCCCCCHHHHCHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHH YEMWRACRLVIDTGVHHDGWSREQALAYLRDRTALSEHEVTTEVDRYISWPGQALSYKLG HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHEEECC EITIVKLRAEAEKELGDRFDIKAFHDVVLRQGSVTLPVLEQQVRAFIAESKARPATSNKP CEEEEEEECHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCC SAAAPRPWPTVRSP CCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA