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The map label for this gene is 21244859

Identifier: 21244859

GI number: 21244859

Start: 4869371

End: 4871254

Strand: Reverse

Name: 21244859

Synonym: XAC4142

Alternate gene names: NA

Gene position: 4871254-4869371 (Counterclockwise)

Preceding gene: 21244860

Following gene: 21244858

Centisome position: 94.12

GC content: 67.09

Gene sequence:

>1884_bases
ATGGACCCGCGCCTACTGCCGTACTACACCCGCGAGTTGCAGCACGTGCGCGACATGGGCGCGGAGTTTGCGCGCGAGTA
TCCCAAGATCGCCGGCCGGCTTGGCCTGGACGCGTTCGAATGCGCCGACCCCTATGTCGAGCGGCTGCTGGAAGGCTTCG
CGTTTCTGGCCGCGCGCGTGCAACTCAAGCTGGACGCGCAGTACCCGGTGTTCACCCAGCACCTGCTGGAGATGGTCTAC
CCGCATTATCTGGCGCCGCTGCCGTCGATGGCGGTGGTGCAGTTGCAGCCGGATCTGAAAGACAGCGGGCTGGCAGCAGG
CGTCGTCGTGTCGCGGCAAAGCGCGCTGCGCAGCCTGGTCGGCCCCGGCGAGCGCACCGCCTGCGAATTCCGCACCGCGC
ATCCGGTGACCTTGTGGCCGTTGCAACTGGCCGAGGCCAAGTATCTGGAATCGCCAGCCGCCTTGGCCGCTGCCGGCATC
GCTTTGCCGCCCGGGCGCGTGGTGCGTGCCGGCGTGCGGCTGCGCTTCGAGCTGGTGGGTGGTGCGCAGACGCACGCGCT
GGCGCTGGATCGGCTGCCGCTGTTTCTGGCCGGCGCCGACGGCCTGCCCAAGCGGTTGTACGAACAACTGCATGCCGATA
CCACCGCCGTGGTGGTGCGTGGCAGCGATGCCCGCGGTGGCACGCTGGAGGTGACGCTGGACGCCGATGCCGTGCAGATG
CGCGGCTTTGCCGACGACGATGCATTGATTCCGTACGACGGCCGTTCGTTCAGTGGCTATCGCCTGCTGCAGGAGTATTT
CGCCTGCCCGGAGCGCTTTTTGTTCGCAGAGCTCGCCGGGCTGCGCGCGCCATTGCGGCGGTTGCACGGCAGCAGCTTCG
AGGTGGTGGTGTTGCTGCAACGCAGCCTGCCCAGCCTGGCTGCGGCAGTAGACGCCGAGCACTTCAAATTGTTCTGCACC
CCGGCGATCAATCTGTTCCCGCGCCGCGCCGATCGCATCCATCTGCAGGCCGGGTTGCACGAGTACCACGTGCTGGCCGA
CCGCACCCGGCCGATGGATTTCGAGATCCATCACCTGGGCGAGGTCGAAGGCTTCGGCGATCGTCAGGAGCCCGAGCAAT
GCTTCACCGCGTTCTATGGTGGCGACGCACGCACCTGGCATGCACGGCATGGCGCGTTCTACAGCATGCGCCGTGAACCG
CGCATGCTATCGGCACGTCAGCGCCGCGATGGCGCGCGGTCGAGCTATGTGGGCAGCGAAGTCTTCGTCAGCCTGGTCGA
TGCCGACGATCAGGCCCACAGCACGCGCCTGCGTCAGCTTGGGCTGCAACTGTGGTGCAGCAACCGCGATCTGCCGCTGC
ATATGCCGGTAGGCAAGGGCGCAAGCGACTTCACCATGGACAGCGGCGTGCCGGTACGGAGCGTGCGCTGCGTGGCCGGG
CCGACCAAGCCGCGCCCGGCATTGTCGGATGGGCAGACTGCGTGGCGCCTGCTCAGTCAATTGCAGCTCAATTATCTGTC
GCTGTTCGAAGATGGCCCCGACGGCGCCGCTGCGCTACGCGAGATCCTCGCCCTGTATTGCGACCCGTTCGACGCGTCCG
CGCAGCGGCAGATCGAAGGCGTCAAGCAGGTGAGCGGCACACCGATCGTGCGGCGCATTCCGGTGCCGGGTCCGATCACC
TTCGGCCGCGGCCTGGAGATCACGCTGACCTGCGAGGACGCCGCCTTCGAAGGCACTGGCGCCTTCCTGCTGGCTTCGGT
GCTGCGGCACTTCTTCGCGCGCTATGTCTCGGTGAATTCCTTTACCGAAACCGTGCTGCGTACCACCGAACGCAACGAGG
TGGCCCGGTGGCCAGCCCAGCCCGGCACGCGCCCGCGCCTGTGA

Upstream 100 bases:

>100_bases
GAGATGTGGGCGCAGCCGCTGCCACTGAACCTGTATCTGAAGACTGCGCTGGATCTGGAAACAGGCCGGCTCGATGTCGT
CGAAGGGAACGGCTGACGTC

Downstream 100 bases:

>100_bases
GCGCCGCGGCTGCCGCGCTGGCACAGGCGCTGCAGACCCGGCCACAGGATTTCAGCCCATTCGCGGCCTTGCGCGCGATC
GAACGCTGCCATCCGCAGCA

Product: hypothetical protein

Products: NA

Alternate protein names: Type VI Secretion Protein Family; T6ss C; Type VI Secretion System; Type VI Secretion System Protein EvpF; Type VI Secretion System Protein; Type VI Secretion Protein VasA; Type VI Secretion; Type VI Secretion System Core Protein; Protein ImpG; Cytoplasmic Protein SciC; Type VI Secretion System Protein ImpG; Conserved Protein; Protein ImpG/VasA

Number of amino acids: Translated: 627; Mature: 627

Protein sequence:

>627_residues
MDPRLLPYYTRELQHVRDMGAEFAREYPKIAGRLGLDAFECADPYVERLLEGFAFLAARVQLKLDAQYPVFTQHLLEMVY
PHYLAPLPSMAVVQLQPDLKDSGLAAGVVVSRQSALRSLVGPGERTACEFRTAHPVTLWPLQLAEAKYLESPAALAAAGI
ALPPGRVVRAGVRLRFELVGGAQTHALALDRLPLFLAGADGLPKRLYEQLHADTTAVVVRGSDARGGTLEVTLDADAVQM
RGFADDDALIPYDGRSFSGYRLLQEYFACPERFLFAELAGLRAPLRRLHGSSFEVVVLLQRSLPSLAAAVDAEHFKLFCT
PAINLFPRRADRIHLQAGLHEYHVLADRTRPMDFEIHHLGEVEGFGDRQEPEQCFTAFYGGDARTWHARHGAFYSMRREP
RMLSARQRRDGARSSYVGSEVFVSLVDADDQAHSTRLRQLGLQLWCSNRDLPLHMPVGKGASDFTMDSGVPVRSVRCVAG
PTKPRPALSDGQTAWRLLSQLQLNYLSLFEDGPDGAAALREILALYCDPFDASAQRQIEGVKQVSGTPIVRRIPVPGPIT
FGRGLEITLTCEDAAFEGTGAFLLASVLRHFFARYVSVNSFTETVLRTTERNEVARWPAQPGTRPRL

Sequences:

>Translated_627_residues
MDPRLLPYYTRELQHVRDMGAEFAREYPKIAGRLGLDAFECADPYVERLLEGFAFLAARVQLKLDAQYPVFTQHLLEMVY
PHYLAPLPSMAVVQLQPDLKDSGLAAGVVVSRQSALRSLVGPGERTACEFRTAHPVTLWPLQLAEAKYLESPAALAAAGI
ALPPGRVVRAGVRLRFELVGGAQTHALALDRLPLFLAGADGLPKRLYEQLHADTTAVVVRGSDARGGTLEVTLDADAVQM
RGFADDDALIPYDGRSFSGYRLLQEYFACPERFLFAELAGLRAPLRRLHGSSFEVVVLLQRSLPSLAAAVDAEHFKLFCT
PAINLFPRRADRIHLQAGLHEYHVLADRTRPMDFEIHHLGEVEGFGDRQEPEQCFTAFYGGDARTWHARHGAFYSMRREP
RMLSARQRRDGARSSYVGSEVFVSLVDADDQAHSTRLRQLGLQLWCSNRDLPLHMPVGKGASDFTMDSGVPVRSVRCVAG
PTKPRPALSDGQTAWRLLSQLQLNYLSLFEDGPDGAAALREILALYCDPFDASAQRQIEGVKQVSGTPIVRRIPVPGPIT
FGRGLEITLTCEDAAFEGTGAFLLASVLRHFFARYVSVNSFTETVLRTTERNEVARWPAQPGTRPRL
>Mature_627_residues
MDPRLLPYYTRELQHVRDMGAEFAREYPKIAGRLGLDAFECADPYVERLLEGFAFLAARVQLKLDAQYPVFTQHLLEMVY
PHYLAPLPSMAVVQLQPDLKDSGLAAGVVVSRQSALRSLVGPGERTACEFRTAHPVTLWPLQLAEAKYLESPAALAAAGI
ALPPGRVVRAGVRLRFELVGGAQTHALALDRLPLFLAGADGLPKRLYEQLHADTTAVVVRGSDARGGTLEVTLDADAVQM
RGFADDDALIPYDGRSFSGYRLLQEYFACPERFLFAELAGLRAPLRRLHGSSFEVVVLLQRSLPSLAAAVDAEHFKLFCT
PAINLFPRRADRIHLQAGLHEYHVLADRTRPMDFEIHHLGEVEGFGDRQEPEQCFTAFYGGDARTWHARHGAFYSMRREP
RMLSARQRRDGARSSYVGSEVFVSLVDADDQAHSTRLRQLGLQLWCSNRDLPLHMPVGKGASDFTMDSGVPVRSVRCVAG
PTKPRPALSDGQTAWRLLSQLQLNYLSLFEDGPDGAAALREILALYCDPFDASAQRQIEGVKQVSGTPIVRRIPVPGPIT
FGRGLEITLTCEDAAFEGTGAFLLASVLRHFFARYVSVNSFTETVLRTTERNEVARWPAQPGTRPRL

Specific function: Unknown

COG id: COG3519

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 69440; Mature: 69440

Theoretical pI: Translated: 7.28; Mature: 7.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDPRLLPYYTRELQHVRDMGAEFAREYPKIAGRLGLDAFECADPYVERLLEGFAFLAARV
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHHHEE
QLKLDAQYPVFTQHLLEMVYPHYLAPLPSMAVVQLQPDLKDSGLAAGVVVSRQSALRSLV
EEEECCCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHC
GPGERTACEFRTAHPVTLWPLQLAEAKYLESPAALAAAGIALPPGRVVRAGVRLRFELVG
CCCCCCEEEEECCCCEEEEHHHHHHHHHHCCCHHHHHCCCCCCCCHHHCCCCEEEEEEEC
GAQTHALALDRLPLFLAGADGLPKRLYEQLHADTTAVVVRGSDARGGTLEVTLDADAVQM
CCCHHHHHHHCCCEEEECCCCCHHHHHHHHCCCCEEEEEECCCCCCCEEEEEECCCHHHH
RGFADDDALIPYDGRSFSGYRLLQEYFACPERFLFAELAGLRAPLRRLHGSSFEVVVLLQ
CCCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEH
RSLPSLAAAVDAEHFKLFCTPAINLFPRRADRIHLQAGLHEYHVLADRTRPMDFEIHHLG
HCCHHHHHHHCCCCEEEEEECHHHHCCCCCCEEEEECCCHHHHHHHCCCCCCCEEEEECC
EVEGFGDRQEPEQCFTAFYGGDARTWHARHGAFYSMRREPRMLSARQRRDGARSSYVGSE
CCCCCCCCCCHHHHHHHHCCCCCCEEECCCCCHHHHCCCCHHHHHHHHCCCCHHHCCCHH
VFVSLVDADDQAHSTRLRQLGLQLWCSNRDLPLHMPVGKGASDFTMDSGVPVRSVRCVAG
HEEEEECCCCHHHHHHHHHHHHHEEECCCCCEEEECCCCCCCCCCCCCCCCHHEEEEECC
PTKPRPALSDGQTAWRLLSQLQLNYLSLFEDGPDGAAALREILALYCDPFDASAQRQIEG
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHH
VKQVSGTPIVRRIPVPGPITFGRGLEITLTCEDAAFEGTGAFLLASVLRHFFARYVSVNS
HHHCCCCCCEEECCCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHH
FTETVLRTTERNEVARWPAQPGTRPRL
HHHHHHHHHCCCHHHCCCCCCCCCCCC
>Mature Secondary Structure
MDPRLLPYYTRELQHVRDMGAEFAREYPKIAGRLGLDAFECADPYVERLLEGFAFLAARV
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHHHEE
QLKLDAQYPVFTQHLLEMVYPHYLAPLPSMAVVQLQPDLKDSGLAAGVVVSRQSALRSLV
EEEECCCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHC
GPGERTACEFRTAHPVTLWPLQLAEAKYLESPAALAAAGIALPPGRVVRAGVRLRFELVG
CCCCCCEEEEECCCCEEEEHHHHHHHHHHCCCHHHHHCCCCCCCCHHHCCCCEEEEEEEC
GAQTHALALDRLPLFLAGADGLPKRLYEQLHADTTAVVVRGSDARGGTLEVTLDADAVQM
CCCHHHHHHHCCCEEEECCCCCHHHHHHHHCCCCEEEEEECCCCCCCEEEEEECCCHHHH
RGFADDDALIPYDGRSFSGYRLLQEYFACPERFLFAELAGLRAPLRRLHGSSFEVVVLLQ
CCCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEH
RSLPSLAAAVDAEHFKLFCTPAINLFPRRADRIHLQAGLHEYHVLADRTRPMDFEIHHLG
HCCHHHHHHHCCCCEEEEEECHHHHCCCCCCEEEEECCCHHHHHHHCCCCCCCEEEEECC
EVEGFGDRQEPEQCFTAFYGGDARTWHARHGAFYSMRREPRMLSARQRRDGARSSYVGSE
CCCCCCCCCCHHHHHHHHCCCCCCEEECCCCCHHHHCCCCHHHHHHHHCCCCHHHCCCHH
VFVSLVDADDQAHSTRLRQLGLQLWCSNRDLPLHMPVGKGASDFTMDSGVPVRSVRCVAG
HEEEEECCCCHHHHHHHHHHHHHEEECCCCCEEEECCCCCCCCCCCCCCCCHHEEEEECC
PTKPRPALSDGQTAWRLLSQLQLNYLSLFEDGPDGAAALREILALYCDPFDASAQRQIEG
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHH
VKQVSGTPIVRRIPVPGPITFGRGLEITLTCEDAAFEGTGAFLLASVLRHFFARYVSVNS
HHHCCCCCCEEECCCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHH
FTETVLRTTERNEVARWPAQPGTRPRL
HHHHHHHHHCCCHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA