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The map label for this gene is 21244858

Identifier: 21244858

GI number: 21244858

Start: 4868367

End: 4869407

Strand: Reverse

Name: 21244858

Synonym: XAC4141

Alternate gene names: NA

Gene position: 4869407-4868367 (Counterclockwise)

Preceding gene: 21244859

Following gene: 21244857

Centisome position: 94.08

GC content: 69.07

Gene sequence:

>1041_bases
GTGGCCAGCCCAGCCCGGCACGCGCCCGCGCCTGTGAGCGCCGCGGCTGCCGCGCTGGCACAGGCGCTGCAGACCCGGCC
ACAGGATTTCAGCCCATTCGCGGCCTTGCGCGCGATCGAACGCTGCCATCCGCAGCAGCCGCGCCTGGGCGAATCGGCGC
GCGCCAGCGACGATGTGCTGCGGCTGCGGCATGCGCCGTCACTGGCATTCGCACCCCATGCGCTGCACCGCTACACACCG
GCAACGCACGATCAGCCTGCCGCGCTGTATGGCGTGTTTTTCGGTCTTTTCGGGCCAAACGCGCCGTTGCCGTTGCACCT
GACCGAATACGCCATCGAGCGTGCGCAGCAAGCCAAGGACGGCACCTTCGCCGCGTTTGCCGATGTGTTCCACCACCGCA
TGCTGAGCCTGTTCTACCGCGCCTGGGCGCAGGCACAGCCCAGCGTGCAGGCCGAGCGCCCGGCGAGCGACCAGTTCCGT
GCGTGGCTGGATGCATTGGTGGGCATCGCCAGCCCGCACCTGCGCCAACGCGATGCATTGCCGGACGATGCACGTCGTTA
CTACGCCGGCCGTCTTGGCACCGCCACACGCACGCCGGAAGGCTTGCGTGCCCTGCTGCAACAGTTGTTCGAATGGCCGG
TGCAGGTACAGGAATTCATCGCCGAATGGATGCGCCTGCCGGCCGATGCGCACCTGCAACTTGGTTTGGGTCCGCGCAAC
GCGCGGCTGGGCGTGGACAGCGTGGTGGGCGCACACGTGCGTGGCGCCCAGCAACGCGTGCGCATCCGCCTGGGGCCGCT
GCCGCGCCTGGCGTTTCAACGCTTTCTGCCGGGTGGCCAGGCGCTGAAGCAACTCACCGCCACGGTGCGCAGCTATCTGG
GCGACGAATTCGGCTGGGAACTGCAGCTGTCGCTCAAGGCCGACGAGGTCCCTACGCCGCACCTGGCGCGCAATAGCCGG
CTGGGCCTGGACACCTGGCTGGGCCGCCGCGCCTGGAGCATTGCCGATGCCGACGACGTGGTGCTGCACCCCTCCGGGTG
A

Upstream 100 bases:

>100_bases
TGCTGGCTTCGGTGCTGCGGCACTTCTTCGCGCGCTATGTCTCGGTGAATTCCTTTACCGAAACCGTGCTGCGTACCACC
GAACGCAACGAGGTGGCCCG

Downstream 100 bases:

>100_bases
CGCGCAGCGCGTACTGATTCGCTCACCACCTATCTATTCGATTCAAGGACGCACCATGGCCGAGATCTCCCGCAGCTCCC
TGTTCGGCAAGCTCAATCCG

Product: hypothetical protein

Products: NA

Alternate protein names: Type VI Secretion Protein Family; Conserved Protein; Cytoplasmic Protein; Type VI Secretion System Protein ImpH; Quinoprotein Dehydrogenase; Replication/Virulence Associated Protein; Type VI Secretion System Protein; Type VI Secretion Protein VasG; T6ss R; Type VI Secretion System Core Protein; Type VI Secretion System Protein EvpG; Protein ImpH; Secreted Protein; Cytoplasmic Protein SciB

Number of amino acids: Translated: 346; Mature: 345

Protein sequence:

>346_residues
MASPARHAPAPVSAAAAALAQALQTRPQDFSPFAALRAIERCHPQQPRLGESARASDDVLRLRHAPSLAFAPHALHRYTP
ATHDQPAALYGVFFGLFGPNAPLPLHLTEYAIERAQQAKDGTFAAFADVFHHRMLSLFYRAWAQAQPSVQAERPASDQFR
AWLDALVGIASPHLRQRDALPDDARRYYAGRLGTATRTPEGLRALLQQLFEWPVQVQEFIAEWMRLPADAHLQLGLGPRN
ARLGVDSVVGAHVRGAQQRVRIRLGPLPRLAFQRFLPGGQALKQLTATVRSYLGDEFGWELQLSLKADEVPTPHLARNSR
LGLDTWLGRRAWSIADADDVVLHPSG

Sequences:

>Translated_346_residues
MASPARHAPAPVSAAAAALAQALQTRPQDFSPFAALRAIERCHPQQPRLGESARASDDVLRLRHAPSLAFAPHALHRYTP
ATHDQPAALYGVFFGLFGPNAPLPLHLTEYAIERAQQAKDGTFAAFADVFHHRMLSLFYRAWAQAQPSVQAERPASDQFR
AWLDALVGIASPHLRQRDALPDDARRYYAGRLGTATRTPEGLRALLQQLFEWPVQVQEFIAEWMRLPADAHLQLGLGPRN
ARLGVDSVVGAHVRGAQQRVRIRLGPLPRLAFQRFLPGGQALKQLTATVRSYLGDEFGWELQLSLKADEVPTPHLARNSR
LGLDTWLGRRAWSIADADDVVLHPSG
>Mature_345_residues
ASPARHAPAPVSAAAAALAQALQTRPQDFSPFAALRAIERCHPQQPRLGESARASDDVLRLRHAPSLAFAPHALHRYTPA
THDQPAALYGVFFGLFGPNAPLPLHLTEYAIERAQQAKDGTFAAFADVFHHRMLSLFYRAWAQAQPSVQAERPASDQFRA
WLDALVGIASPHLRQRDALPDDARRYYAGRLGTATRTPEGLRALLQQLFEWPVQVQEFIAEWMRLPADAHLQLGLGPRNA
RLGVDSVVGAHVRGAQQRVRIRLGPLPRLAFQRFLPGGQALKQLTATVRSYLGDEFGWELQLSLKADEVPTPHLARNSRL
GLDTWLGRRAWSIADADDVVLHPSG

Specific function: Unknown

COG id: COG3520

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38216; Mature: 38085

Theoretical pI: Translated: 10.27; Mature: 10.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASPARHAPAPVSAAAAALAQALQTRPQDFSPFAALRAIERCHPQQPRLGESARASDDVL
CCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHH
RLRHAPSLAFAPHALHRYTPATHDQPAALYGVFFGLFGPNAPLPLHLTEYAIERAQQAKD
HHHCCCCCHHCHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCC
GTFAAFADVFHHRMLSLFYRAWAQAQPSVQAERPASDQFRAWLDALVGIASPHLRQRDAL
CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHCCC
PDDARRYYAGRLGTATRTPEGLRALLQQLFEWPVQVQEFIAEWMRLPADAHLQLGLGPRN
CHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCEEEECCCCCC
ARLGVDSVVGAHVRGAQQRVRIRLGPLPRLAFQRFLPGGQALKQLTATVRSYLGDEFGWE
CCCCHHHHHHHHHHHHHHHHEEEECCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCE
LQLSLKADEVPTPHLARNSRLGLDTWLGRRAWSIADADDVVLHPSG
EEEEEECCCCCCCCCCCCCCCCHHHHHCCHHCCCCCCCCEEECCCC
>Mature Secondary Structure 
ASPARHAPAPVSAAAAALAQALQTRPQDFSPFAALRAIERCHPQQPRLGESARASDDVL
CCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHH
RLRHAPSLAFAPHALHRYTPATHDQPAALYGVFFGLFGPNAPLPLHLTEYAIERAQQAKD
HHHCCCCCHHCHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCC
GTFAAFADVFHHRMLSLFYRAWAQAQPSVQAERPASDQFRAWLDALVGIASPHLRQRDAL
CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHCCC
PDDARRYYAGRLGTATRTPEGLRALLQQLFEWPVQVQEFIAEWMRLPADAHLQLGLGPRN
CHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCEEEECCCCCC
ARLGVDSVVGAHVRGAQQRVRIRLGPLPRLAFQRFLPGGQALKQLTATVRSYLGDEFGWE
CCCCHHHHHHHHHHHHHHHHEEEECCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCE
LQLSLKADEVPTPHLARNSRLGLDTWLGRRAWSIADADDVVLHPSG
EEEEEECCCCCCCCCCCCCCCCHHHHHCCHHCCCCCCCCEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA