| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21244809
Identifier: 21244809
GI number: 21244809
Start: 4796882
End: 4797418
Strand: Reverse
Name: 21244809
Synonym: XAC4092
Alternate gene names: NA
Gene position: 4797418-4796882 (Counterclockwise)
Preceding gene: 21244810
Following gene: 21244807
Centisome position: 92.69
GC content: 63.87
Gene sequence:
>537_bases GTGCCATCGGCAGCACAGTGGCGTTGGGCGTGTTGTTCAATTTCATTCTGGCCTTGCTGGTGTCGCGCGAACCGGCGCTG GAACGCACCGCGAACGGAGAACCGCATGCAGGGACGTGACGCAATCGCTGCGCTGATTCCGCACCAGGGCAGCATGTGCC TGTGGGAAGAAGTGATCGAGTGGGATGCGCAGCGCATTGTGCTGCGCAGTCACGCGCATCGCAGCGATGCGCATCCGTTG CGTAGCAACGGGCGTTTGCGCGCCCTGCATCTGTGCGAATACGGCGCGCAGGCCATGGCCGTGCATGGCGGGTTGCTGGG CCGCAAATCCGGCAAGCCGGTACGCCCGGGCATGCTGGTAGCGCTGCGTAGCGTGGAGGTGCACGTGATGTATCTGGATA CCTTGCCGGATGCGATCGAGTGCCAGGCGCAGGTGTTGATGCAGGGCGAGGACAGCCAGCAATACAGTTTTCGCCTGACC CATGGCGCGCAATTGCTTGCCGAAGGACGCGCCACCGTGATGCTGGGCGCGCCCTGA
Upstream 100 bases:
>100_bases CACGCCGACCAACTGCGTACGCTGCATGCGTTGATCGTCTGCAGCCTGATGACGCTGCTGGTATTTGCGCTGTTGGCCGT GTCCAGCATCCCGGTCTTGC
Downstream 100 bases:
>100_bases GATCAGCTTCAGGAGGCGGCGGGTGTCTTGCTTGCAACCAGCGCGCTCAGGTTGGCGACGCTGGGCAGGCGGTGCGTATA CAGCCGTGCGATATCGCCGC
Product: phosphotransferase
Products: NA
Alternate protein names: Potential 3-Hydroxydecyl-(Acyl Carrier Protein) Dehydratase; Beta-Hydroxyacyl-Acyl Carrier Protein-Dehydratase; 3-Oxoacyl-[Acyl-Carrier-Protein] Reductase; XanthomoNADin Biosynthesis Protein; -Hydroxymyristoyl-Acyl-Carrier-Protein Dehydratase; 3-Oxoacyl-[Acyl-Carrier Protein] Reductase; 3-Hydroxylacyl-(Acyl Carrier Protein) Dehydratase-Like
Number of amino acids: Translated: 178; Mature: 177
Protein sequence:
>178_residues MPSAAQWRWACCSISFWPCWCRANRRWNAPRTENRMQGRDAIAALIPHQGSMCLWEEVIEWDAQRIVLRSHAHRSDAHPL RSNGRLRALHLCEYGAQAMAVHGGLLGRKSGKPVRPGMLVALRSVEVHVMYLDTLPDAIECQAQVLMQGEDSQQYSFRLT HGAQLLAEGRATVMLGAP
Sequences:
>Translated_178_residues MPSAAQWRWACCSISFWPCWCRANRRWNAPRTENRMQGRDAIAALIPHQGSMCLWEEVIEWDAQRIVLRSHAHRSDAHPL RSNGRLRALHLCEYGAQAMAVHGGLLGRKSGKPVRPGMLVALRSVEVHVMYLDTLPDAIECQAQVLMQGEDSQQYSFRLT HGAQLLAEGRATVMLGAP >Mature_177_residues PSAAQWRWACCSISFWPCWCRANRRWNAPRTENRMQGRDAIAALIPHQGSMCLWEEVIEWDAQRIVLRSHAHRSDAHPLR SNGRLRALHLCEYGAQAMAVHGGLLGRKSGKPVRPGMLVALRSVEVHVMYLDTLPDAIECQAQVLMQGEDSQQYSFRLTH GAQLLAEGRATVMLGAP
Specific function: Unknown
COG id: COG4706
COG function: function code I; Predicted 3-hydroxylacyl-(acyl carrier protein) dehydratase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20009; Mature: 19878
Theoretical pI: Translated: 8.71; Mature: 8.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.9 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 8.4 %Cys+Met (Translated Protein) 4.0 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 7.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSAAQWRWACCSISFWPCWCRANRRWNAPRTENRMQGRDAIAALIPHQGSMCLWEEVIE CCCCCCEEEEEEECEECEEEEECCCCCCCCCCCCHHCCHHHEEEECCCCCCHHHHHHHHH WDAQRIVLRSHAHRSDAHPLRSNGRLRALHLCEYGAQAMAVHGGLLGRKSGKPVRPGMLV HHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCCEEEECCCEEECCCCCCCCCCCEE ALRSVEVHVMYLDTLPDAIECQAQVLMQGEDSQQYSFRLTHGAQLLAEGRATVMLGAP EEEEEEEEEEEECCCCCHHHHHHHEEECCCCCCEEEEEECCCHHEEECCCEEEEEECC >Mature Secondary Structure PSAAQWRWACCSISFWPCWCRANRRWNAPRTENRMQGRDAIAALIPHQGSMCLWEEVIE CCCCCEEEEEEECEECEEEEECCCCCCCCCCCCHHCCHHHEEEECCCCCCHHHHHHHHH WDAQRIVLRSHAHRSDAHPLRSNGRLRALHLCEYGAQAMAVHGGLLGRKSGKPVRPGMLV HHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCCEEEECCCEEECCCCCCCCCCCEE ALRSVEVHVMYLDTLPDAIECQAQVLMQGEDSQQYSFRLTHGAQLLAEGRATVMLGAP EEEEEEEEEEEECCCCCHHHHHHHEEECCCCCCEEEEEECCCHHEEECCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA