| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is actII-3
Identifier: 21244810
GI number: 21244810
Start: 4797300
End: 4799666
Strand: Reverse
Name: actII-3
Synonym: XAC4093
Alternate gene names: NA
Gene position: 4799666-4797300 (Counterclockwise)
Preceding gene: 21244811
Following gene: 21244809
Centisome position: 92.74
GC content: 67.51
Gene sequence:
>2367_bases ATGTCGCTTAAGTTGAACGCAAACCGCCGCATCGGCCTGGCACTGTTGTGGCTGGCCTTGCTGGCAGTGGCCGGATTCTG GTTGAGCGAGACGCTCAAGGTCACCGGCGACCTGCGCAAGTTCATGCCCGCCCCGCGCACGCCGGCGCAAAAACTGCTGA TCGAAGAACTCGGCGAAGGCCCTGGATCGCGGCTGCTGCTGATGGCGTTGTCCAACAACGATCCGGTCACCTTGGCCGAG CAGTCGCAGCAACTGCACCAAGCGCTGTCCGCACAGCCGGCGCTGTTCGAACTGGTCGGCAATGGCGGCAATGCCGGGTT GGAGGCGATTCCCGAGCGCTTGCTGCCGTACCGCTATCTGCTCAGCGACAGCTTCGACAAGACCCCGCTCGACGCGCGGA CGCTGGAAGCGGCGTTGCAGGCGCGCGTGCAGGATCTGGGCTCGCCGGCGGCGGCCATGGTGGAGCCGTTGTTGCCGCGC GACCCCACGATGGAAATCCTGCATCTGGCCGACACCCTGCAGCCGGCAGCGATGCCGCGCACGCGCAATGACGTGTGGTT CGATCGCGCAGGCACCTCGGCGCTGTTGATCGTGCAGACCCGCGCGGCAGGCTTCGACCCCACCGGCCAGCAGCTGGCCT ATGACGCCGTGCAAGCGGCGTTCGCGAAGGTCAGCAAGGGCACTGCCACCCGGCTGACGCTGACCGGGCCGGGCGCATTC GCGGTGGAAATCACCGCGCGCACGCAGGGCGAGGCGCAGTGGATCGGCACGCTCGATACGGTGGGCCTGGTGCTGCTGCT GCTGGTGGCCTACCGTAGCTGGAAGATTCCGGTACTTGGCGTGTTGCCGCTGGCCAGCGCCGGTCTAGCCGGCCTGGGTG CGGTGGCGCTGCTGTTCGACGGCGTGCACGGCATCACCGTGGCATTCGGCTTCACGCTGATCGGTGTAGTGCAGGATTAC CCGATCCATCTGTTCAGTCATCAGCGTCCCGGTCTGGATCCGCGCGAGAACGCACGGCATCTGTGGCCGACGTTGGCCAC CGGCGTGGTCTCCACCTGCATTGCCTACGTGACCTTCCTGTTCTCCGGCGTGGACGGCTTGCGGCAGCTGGCGGTGTTCA CCATTGCCGGCCTTGCCACCGCCGCGGTCACCACGCGCTGGCTGTTGCCGGCCCTGATCGATCCGGCCCCGCGCGACTAC GCGGACTCGCGCGTGCTGGCGGTGCTGTGGCGTGGCATTGCGCGCCTGCCGCGGCCACGCATCAGCCTGGCGGCGATGGC CGTGATCGGCATTGCGGTGATCGTGTTCGCGCCGGGGCAGTTCTGGCAAAACGATCTGTCGAAGCTAACCCCCGTGCCGC CCAAGGCATTGGCGCAGGACACCCATCTGCGTCAGGAACTGGGCGCGCCGGACGTGCGTTACGTGCTGGCGCTGCCGGCA GCCAGCGATGAGGCGGCGCTGCAGGCCAGCGAGCAATTGCGCCCGCGTCTGGATGCGCCGGTGCGCGCTGGTGCGTTGCT CGGCTACGACATGGCGGCACGCTATCTGCCCAGCGCCAAGACCCAGCGTGCGCGACAGGCCGCCTTGCCCGATACTGCGC AGGCGCGCGCGCTGACCGAGCGCGCAGTAGCCACCACGCCATTCCGCAGCGATGCGTTTGCGCCGTTCCTGCAGGATCTG GACGCCGCCAAGCGCGCCGCACCGCTGCTACCGAAGGATCTGAGCGGCTCGCCGCTGGCCACGTCGGTCGGTGGCTTGCT GCTCGGCCGTGGCGATCGCAGCACCGCGCTGGTGTCGTTGACGGGCCTGCGCGATCCGGCGGTGTTGGCGGCCGCCGTGC AAGGCAGCGGCGCGCAATTGCTGGATCTGAAGGACGCCTCCGAATCGCTGGTGGCCGCCTACCGCGGACGCGTGCTCGGT GCGCTGGTCCTGGCTGCCTTGTTGCTGGCAGTGACCGTGGCGATCGCACTGCGCAGCCCGCGCCGCATCGTGCGCGTACT GCTGCCGATGGCGCTGACGACGGTGCTGATCCTGGCGATCCTGCGCGGCACCGGGGTGGAACTCAATCTGTTCCATCTGA TCGCGCTGATCCTGGCCGCCGGTCTGGGCCTGGATTACGCGCTGTTCTTCGATCATGCCGGCGACGATCACGCCGACCAA CTGCGTACGCTGCATGCGTTGATCGTCTGCAGCCTGATGACGCTGCTGGTATTTGCGCTGTTGGCCGTGTCCAGCATCCC GGTCTTGCGTGCCATCGGCAGCACAGTGGCGTTGGGCGTGTTGTTCAATTTCATTCTGGCCTTGCTGGTGTCGCGCGAAC CGGCGCTGGAACGCACCGCGAACGGAGAACCGCATGCAGGGACGTGA
Upstream 100 bases:
>100_bases AAGTTCATGCCCGCCCTCAGGAAAAACAACGCGTCGTTGCAGCCCGATGCCGCGCGCGCGGCCAGCGGGCGTTCGGCCGC TGTAGCAGGACACGTACACC
Downstream 100 bases:
>100_bases CGCAATCGCTGCGCTGATTCCGCACCAGGGCAGCATGTGCCTGTGGGAAGAAGTGATCGAGTGGGATGCGCAGCGCATTG TGCTGCGCAGTCACGCGCAT
Product: membrane protein
Products: NA
Alternate protein names: RND Superfamily Drug Exporter; Transmembrane Protein; Mmpl Exporter Transmembrane Protein; XanthomoNADin Exporter; MMPL Domain Protein; Lipoprotein Transmembrane; Drug Efflux Pump RND Superfamily; Exporter TRANSMEMBRANE PROTEIN; Integral Membrane Protein; Phosphoglucomutase/Phosphomannomutase Alpha/Beta/Subunit
Number of amino acids: Translated: 788; Mature: 787
Protein sequence:
>788_residues MSLKLNANRRIGLALLWLALLAVAGFWLSETLKVTGDLRKFMPAPRTPAQKLLIEELGEGPGSRLLLMALSNNDPVTLAE QSQQLHQALSAQPALFELVGNGGNAGLEAIPERLLPYRYLLSDSFDKTPLDARTLEAALQARVQDLGSPAAAMVEPLLPR DPTMEILHLADTLQPAAMPRTRNDVWFDRAGTSALLIVQTRAAGFDPTGQQLAYDAVQAAFAKVSKGTATRLTLTGPGAF AVEITARTQGEAQWIGTLDTVGLVLLLLVAYRSWKIPVLGVLPLASAGLAGLGAVALLFDGVHGITVAFGFTLIGVVQDY PIHLFSHQRPGLDPRENARHLWPTLATGVVSTCIAYVTFLFSGVDGLRQLAVFTIAGLATAAVTTRWLLPALIDPAPRDY ADSRVLAVLWRGIARLPRPRISLAAMAVIGIAVIVFAPGQFWQNDLSKLTPVPPKALAQDTHLRQELGAPDVRYVLALPA ASDEAALQASEQLRPRLDAPVRAGALLGYDMAARYLPSAKTQRARQAALPDTAQARALTERAVATTPFRSDAFAPFLQDL DAAKRAAPLLPKDLSGSPLATSVGGLLLGRGDRSTALVSLTGLRDPAVLAAAVQGSGAQLLDLKDASESLVAAYRGRVLG ALVLAALLLAVTVAIALRSPRRIVRVLLPMALTTVLILAILRGTGVELNLFHLIALILAAGLGLDYALFFDHAGDDHADQ LRTLHALIVCSLMTLLVFALLAVSSIPVLRAIGSTVALGVLFNFILALLVSREPALERTANGEPHAGT
Sequences:
>Translated_788_residues MSLKLNANRRIGLALLWLALLAVAGFWLSETLKVTGDLRKFMPAPRTPAQKLLIEELGEGPGSRLLLMALSNNDPVTLAE QSQQLHQALSAQPALFELVGNGGNAGLEAIPERLLPYRYLLSDSFDKTPLDARTLEAALQARVQDLGSPAAAMVEPLLPR DPTMEILHLADTLQPAAMPRTRNDVWFDRAGTSALLIVQTRAAGFDPTGQQLAYDAVQAAFAKVSKGTATRLTLTGPGAF AVEITARTQGEAQWIGTLDTVGLVLLLLVAYRSWKIPVLGVLPLASAGLAGLGAVALLFDGVHGITVAFGFTLIGVVQDY PIHLFSHQRPGLDPRENARHLWPTLATGVVSTCIAYVTFLFSGVDGLRQLAVFTIAGLATAAVTTRWLLPALIDPAPRDY ADSRVLAVLWRGIARLPRPRISLAAMAVIGIAVIVFAPGQFWQNDLSKLTPVPPKALAQDTHLRQELGAPDVRYVLALPA ASDEAALQASEQLRPRLDAPVRAGALLGYDMAARYLPSAKTQRARQAALPDTAQARALTERAVATTPFRSDAFAPFLQDL DAAKRAAPLLPKDLSGSPLATSVGGLLLGRGDRSTALVSLTGLRDPAVLAAAVQGSGAQLLDLKDASESLVAAYRGRVLG ALVLAALLLAVTVAIALRSPRRIVRVLLPMALTTVLILAILRGTGVELNLFHLIALILAAGLGLDYALFFDHAGDDHADQ LRTLHALIVCSLMTLLVFALLAVSSIPVLRAIGSTVALGVLFNFILALLVSREPALERTANGEPHAGT >Mature_787_residues SLKLNANRRIGLALLWLALLAVAGFWLSETLKVTGDLRKFMPAPRTPAQKLLIEELGEGPGSRLLLMALSNNDPVTLAEQ SQQLHQALSAQPALFELVGNGGNAGLEAIPERLLPYRYLLSDSFDKTPLDARTLEAALQARVQDLGSPAAAMVEPLLPRD PTMEILHLADTLQPAAMPRTRNDVWFDRAGTSALLIVQTRAAGFDPTGQQLAYDAVQAAFAKVSKGTATRLTLTGPGAFA VEITARTQGEAQWIGTLDTVGLVLLLLVAYRSWKIPVLGVLPLASAGLAGLGAVALLFDGVHGITVAFGFTLIGVVQDYP IHLFSHQRPGLDPRENARHLWPTLATGVVSTCIAYVTFLFSGVDGLRQLAVFTIAGLATAAVTTRWLLPALIDPAPRDYA DSRVLAVLWRGIARLPRPRISLAAMAVIGIAVIVFAPGQFWQNDLSKLTPVPPKALAQDTHLRQELGAPDVRYVLALPAA SDEAALQASEQLRPRLDAPVRAGALLGYDMAARYLPSAKTQRARQAALPDTAQARALTERAVATTPFRSDAFAPFLQDLD AAKRAAPLLPKDLSGSPLATSVGGLLLGRGDRSTALVSLTGLRDPAVLAAAVQGSGAQLLDLKDASESLVAAYRGRVLGA LVLAALLLAVTVAIALRSPRRIVRVLLPMALTTVLILAILRGTGVELNLFHLIALILAAGLGLDYALFFDHAGDDHADQL RTLHALIVCSLMTLLVFALLAVSSIPVLRAIGSTVALGVLFNFILALLVSREPALERTANGEPHAGT
Specific function: Unknown
COG id: COG4258
COG function: function code R; Predicted exporter
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 83577; Mature: 83445
Theoretical pI: Translated: 9.37; Mature: 9.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLKLNANRRIGLALLWLALLAVAGFWLSETLKVTGDLRKFMPAPRTPAQKLLIEELGEG CCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCC PGSRLLLMALSNNDPVTLAEQSQQLHQALSAQPALFELVGNGGNAGLEAIPERLLPYRYL CCCEEEEEEECCCCCEEHHHHHHHHHHHHCCCCCEEHEECCCCCCCHHHHHHHHCHHHHH LSDSFDKTPLDARTLEAALQARVQDLGSPAAAMVEPLLPRDPTMEILHLADTLQPAAMPR HCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCHHHHHHHHHHCHHCCCC TRNDVWFDRAGTSALLIVQTRAAGFDPTGQQLAYDAVQAAFAKVSKGTATRLTLTGPGAF CCCCCEEECCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCEE AVEITARTQGEAQWIGTLDTVGLVLLLLVAYRSWKIPVLGVLPLASAGLAGLGAVALLFD EEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHCCHHHHHHHHHHHC GVHGITVAFGFTLIGVVQDYPIHLFSHQRPGLDPRENARHLWPTLATGVVSTCIAYVTFL CHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHH FSGVDGLRQLAVFTIAGLATAAVTTRWLLPALIDPAPRDYADSRVLAVLWRGIARLPRPR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCC ISLAAMAVIGIAVIVFAPGQFWQNDLSKLTPVPPKALAQDTHLRQELGAPDVRYVLALPA HHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECC ASDEAALQASEQLRPRLDAPVRAGALLGYDMAARYLPSAKTQRARQAALPDTAQARALTE CCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHH RAVATTPFRSDAFAPFLQDLDAAKRAAPLLPKDLSGSPLATSVGGLLLGRGDRSTALVSL HHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCEEECCCCCEEEEEE TGLRDPAVLAAAVQGSGAQLLDLKDASESLVAAYRGRVLGALVLAALLLAVTVAIALRSP ECCCCHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH RRIVRVLLPMALTTVLILAILRGTGVELNLFHLIALILAAGLGLDYALFFDHAGDDHADQ HHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHH LRTLHALIVCSLMTLLVFALLAVSSIPVLRAIGSTVALGVLFNFILALLVSREPALERTA HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCC NGEPHAGT CCCCCCCC >Mature Secondary Structure SLKLNANRRIGLALLWLALLAVAGFWLSETLKVTGDLRKFMPAPRTPAQKLLIEELGEG CEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCC PGSRLLLMALSNNDPVTLAEQSQQLHQALSAQPALFELVGNGGNAGLEAIPERLLPYRYL CCCEEEEEEECCCCCEEHHHHHHHHHHHHCCCCCEEHEECCCCCCCHHHHHHHHCHHHHH LSDSFDKTPLDARTLEAALQARVQDLGSPAAAMVEPLLPRDPTMEILHLADTLQPAAMPR HCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCHHHHHHHHHHCHHCCCC TRNDVWFDRAGTSALLIVQTRAAGFDPTGQQLAYDAVQAAFAKVSKGTATRLTLTGPGAF CCCCCEEECCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCEE AVEITARTQGEAQWIGTLDTVGLVLLLLVAYRSWKIPVLGVLPLASAGLAGLGAVALLFD EEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHCCHHHHHHHHHHHC GVHGITVAFGFTLIGVVQDYPIHLFSHQRPGLDPRENARHLWPTLATGVVSTCIAYVTFL CHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHH FSGVDGLRQLAVFTIAGLATAAVTTRWLLPALIDPAPRDYADSRVLAVLWRGIARLPRPR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCC ISLAAMAVIGIAVIVFAPGQFWQNDLSKLTPVPPKALAQDTHLRQELGAPDVRYVLALPA HHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECC ASDEAALQASEQLRPRLDAPVRAGALLGYDMAARYLPSAKTQRARQAALPDTAQARALTE CCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHH RAVATTPFRSDAFAPFLQDLDAAKRAAPLLPKDLSGSPLATSVGGLLLGRGDRSTALVSL HHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCEEECCCCCEEEEEE TGLRDPAVLAAAVQGSGAQLLDLKDASESLVAAYRGRVLGALVLAALLLAVTVAIALRSP ECCCCHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH RRIVRVLLPMALTTVLILAILRGTGVELNLFHLIALILAAGLGLDYALFFDHAGDDHADQ HHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHH LRTLHALIVCSLMTLLVFALLAVSSIPVLRAIGSTVALGVLFNFILALLVSREPALERTA HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCC NGEPHAGT CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA