| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is fabG [H]
Identifier: 21244807
GI number: 21244807
Start: 4795411
End: 4796142
Strand: Reverse
Name: fabG [H]
Synonym: XAC4090
Alternate gene names: 21244807
Gene position: 4796142-4795411 (Counterclockwise)
Preceding gene: 21244809
Following gene: 21244802
Centisome position: 92.67
GC content: 66.8
Gene sequence:
>732_bases ATGAACTCATCTGCACGACGCGCACTCGTTACCGGCGGCAGCGGCGATCTTGGCGGTGCGATCTGCCGCCACCTGGCTGC GCAGGGCCGGCATGTGATCGTGCACGCCAACGGCAACCTGGCGCGTGCCGACGAGGTGGTTGCCGCGATCGTGGCCGATG GCGGGAGCGCACAGGCAGTGGCCTTCGATGTGGCCGACGCGCAGGCAAGTTCGGCGGCGCTGGAGAGCTTGCTGGAAGCT GGCCCGATCCAGATCGTGGTCAACAACGCGGGCATCCACGACGACGCGCCGATGGCAGGCATGAATGTCGAGCAGTGGCA TCGCGTCATCGACGTGTCGCTGCACGGTTTTTTCAATGTCACCCAGCCGTTGCTGCTGCCGATGGCGCGCACGCGTTGGG GCCGCGTCGTCAGCGTGTCGTCGGTGGCGGCCGTGCTGGGTAATCGCGGGCAGACCAACTACGCCGCCGCCAAGGCCGCC TTGCATGGTGCCAGCAAGTCGCTCTCGCGCGAAATGGCCAGCCGCGGCATCGCGGTGAATGTGGTCGCGCCCGGCGTGAT CGAAAGCGACATGGTCGGCGACAGTTTTGCGCCGGAGGCGATCAAGCAGTTGGTGCCCGCCGGCCGCGTCGGCAAACCCG ATGAAGTGGCCGCGCTGGTCGCCTTTCTGTGCTCGGACGCGGCCGGCTACATCAATGGCCAGGTGATCGGCGTCAATGGT GGGATGGGCTGA
Upstream 100 bases:
>100_bases CATGGTCAGGCAAATACGCGAGAAGTACCAAGAGTCCGTCCTTCAGCGGGCAGCTTGATCTACGATAACGCTCCTTCTCT GCTCATATGGTTCGTGGCTT
Downstream 100 bases:
>100_bases GGGCGGCTACCGATACGACTGCGCTCACCGCCAGGGCGCGGTCGGTGCTCGGTATCGGCATGTACCACTCGGACACTGTG GTTCTGAGTGCGCCGTCCAC
Product: 3-ketoacyl-(acyl-carrier-protein) reductase
Products: NA
Alternate protein names: 3-ketoacyl-acyl carrier protein reductase [H]
Number of amino acids: Translated: 243; Mature: 243
Protein sequence:
>243_residues MNSSARRALVTGGSGDLGGAICRHLAAQGRHVIVHANGNLARADEVVAAIVADGGSAQAVAFDVADAQASSAALESLLEA GPIQIVVNNAGIHDDAPMAGMNVEQWHRVIDVSLHGFFNVTQPLLLPMARTRWGRVVSVSSVAAVLGNRGQTNYAAAKAA LHGASKSLSREMASRGIAVNVVAPGVIESDMVGDSFAPEAIKQLVPAGRVGKPDEVAALVAFLCSDAAGYINGQVIGVNG GMG
Sequences:
>Translated_243_residues MNSSARRALVTGGSGDLGGAICRHLAAQGRHVIVHANGNLARADEVVAAIVADGGSAQAVAFDVADAQASSAALESLLEA GPIQIVVNNAGIHDDAPMAGMNVEQWHRVIDVSLHGFFNVTQPLLLPMARTRWGRVVSVSSVAAVLGNRGQTNYAAAKAA LHGASKSLSREMASRGIAVNVVAPGVIESDMVGDSFAPEAIKQLVPAGRVGKPDEVAALVAFLCSDAAGYINGQVIGVNG GMG >Mature_243_residues MNSSARRALVTGGSGDLGGAICRHLAAQGRHVIVHANGNLARADEVVAAIVADGGSAQAVAFDVADAQASSAALESLLEA GPIQIVVNNAGIHDDAPMAGMNVEQWHRVIDVSLHGFFNVTQPLLLPMARTRWGRVVSVSSVAAVLGNRGQTNYAAAKAA LHGASKSLSREMASRGIAVNVVAPGVIESDMVGDSFAPEAIKQLVPAGRVGKPDEVAALVAFLCSDAAGYINGQVIGVNG GMG
Specific function: Fatty acid biosynthesis pathway; first reduction step. [C]
COG id: COG1028
COG function: function code IQR; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]
Homologues:
Organism=Homo sapiens, GI15277342, Length=247, Percent_Identity=34.412955465587, Blast_Score=120, Evalue=1e-27, Organism=Homo sapiens, GI32483357, Length=243, Percent_Identity=33.3333333333333, Blast_Score=115, Evalue=5e-26, Organism=Homo sapiens, GI40254992, Length=237, Percent_Identity=35.0210970464135, Blast_Score=110, Evalue=1e-24, Organism=Homo sapiens, GI19923817, Length=250, Percent_Identity=32.4, Blast_Score=102, Evalue=4e-22, Organism=Homo sapiens, GI5031737, Length=249, Percent_Identity=31.7269076305221, Blast_Score=99, Evalue=2e-21, Organism=Homo sapiens, GI4504505, Length=233, Percent_Identity=33.4763948497854, Blast_Score=98, Evalue=8e-21, Organism=Homo sapiens, GI126723750, Length=244, Percent_Identity=27.8688524590164, Blast_Score=90, Evalue=2e-18, Organism=Homo sapiens, GI4503301, Length=197, Percent_Identity=32.994923857868, Blast_Score=89, Evalue=3e-18, Organism=Homo sapiens, GI7705925, Length=242, Percent_Identity=27.2727272727273, Blast_Score=80, Evalue=1e-15, Organism=Homo sapiens, GI10190704, Length=244, Percent_Identity=29.9180327868852, Blast_Score=77, Evalue=1e-14, Organism=Homo sapiens, GI4758504, Length=262, Percent_Identity=28.2442748091603, Blast_Score=75, Evalue=8e-14, Organism=Homo sapiens, GI33667109, Length=196, Percent_Identity=31.6326530612245, Blast_Score=74, Evalue=8e-14, Organism=Homo sapiens, GI7706318, Length=212, Percent_Identity=27.3584905660377, Blast_Score=71, Evalue=7e-13, Organism=Homo sapiens, GI7657478, Length=200, Percent_Identity=27.5, Blast_Score=71, Evalue=8e-13, Organism=Homo sapiens, GI59889578, Length=176, Percent_Identity=29.5454545454545, Blast_Score=70, Evalue=1e-12, Organism=Homo sapiens, GI20149619, Length=189, Percent_Identity=29.1005291005291, Blast_Score=69, Evalue=3e-12, Organism=Homo sapiens, GI4503817, Length=218, Percent_Identity=25.2293577981651, Blast_Score=67, Evalue=1e-11, Organism=Escherichia coli, GI1787335, Length=249, Percent_Identity=43.3734939759036, Blast_Score=176, Evalue=8e-46, Organism=Escherichia coli, GI1790717, Length=242, Percent_Identity=30.5785123966942, Blast_Score=114, Evalue=5e-27, Organism=Escherichia coli, GI2367175, Length=243, Percent_Identity=34.9794238683128, Blast_Score=114, Evalue=6e-27, Organism=Escherichia coli, GI1788459, Length=242, Percent_Identity=31.404958677686, Blast_Score=110, Evalue=7e-26, Organism=Escherichia coli, GI87082100, Length=253, Percent_Identity=33.201581027668, Blast_Score=105, Evalue=3e-24, Organism=Escherichia coli, GI1787905, Length=240, Percent_Identity=30.4166666666667, Blast_Score=95, Evalue=4e-21, Organism=Escherichia coli, GI1786812, Length=192, Percent_Identity=33.8541666666667, Blast_Score=93, Evalue=2e-20, Organism=Escherichia coli, GI87082160, Length=252, Percent_Identity=28.1746031746032, Blast_Score=89, Evalue=3e-19, Organism=Escherichia coli, GI2367365, Length=246, Percent_Identity=29.2682926829268, Blast_Score=85, Evalue=4e-18, Organism=Escherichia coli, GI1789208, Length=240, Percent_Identity=27.0833333333333, Blast_Score=84, Evalue=1e-17, Organism=Escherichia coli, GI1789378, Length=246, Percent_Identity=30.0813008130081, Blast_Score=82, Evalue=4e-17, Organism=Escherichia coli, GI1789057, Length=252, Percent_Identity=27.7777777777778, Blast_Score=74, Evalue=1e-14, Organism=Caenorhabditis elegans, GI17555706, Length=249, Percent_Identity=35.7429718875502, Blast_Score=134, Evalue=5e-32, Organism=Caenorhabditis elegans, GI25147288, Length=250, Percent_Identity=34.8, Blast_Score=129, Evalue=1e-30, Organism=Caenorhabditis elegans, GI17560676, Length=246, Percent_Identity=34.9593495934959, Blast_Score=117, Evalue=6e-27, Organism=Caenorhabditis elegans, GI17568967, Length=233, Percent_Identity=34.7639484978541, Blast_Score=97, Evalue=9e-21, Organism=Caenorhabditis elegans, GI115534694, Length=251, Percent_Identity=31.4741035856574, Blast_Score=94, Evalue=5e-20, Organism=Caenorhabditis elegans, GI17536651, Length=246, Percent_Identity=31.3008130081301, Blast_Score=91, Evalue=5e-19, Organism=Caenorhabditis elegans, GI17560150, Length=257, Percent_Identity=29.1828793774319, Blast_Score=90, Evalue=1e-18, Organism=Caenorhabditis elegans, GI17562990, Length=259, Percent_Identity=29.3436293436293, Blast_Score=88, Evalue=3e-18, Organism=Caenorhabditis elegans, GI17538480, Length=266, Percent_Identity=31.203007518797, Blast_Score=87, Evalue=5e-18, Organism=Caenorhabditis elegans, GI17538486, Length=256, Percent_Identity=30.859375, Blast_Score=87, Evalue=1e-17, Organism=Caenorhabditis elegans, GI17560332, Length=258, Percent_Identity=29.4573643410853, Blast_Score=86, Evalue=2e-17, Organism=Caenorhabditis elegans, GI71994600, Length=249, Percent_Identity=29.3172690763052, Blast_Score=86, Evalue=2e-17, Organism=Caenorhabditis elegans, GI17561402, Length=260, Percent_Identity=29.2307692307692, Blast_Score=86, Evalue=2e-17, Organism=Caenorhabditis elegans, GI71994604, Length=248, Percent_Identity=28.6290322580645, Blast_Score=84, Evalue=8e-17, Organism=Caenorhabditis elegans, GI17562910, Length=261, Percent_Identity=29.1187739463602, Blast_Score=84, Evalue=8e-17, Organism=Caenorhabditis elegans, GI17562904, Length=261, Percent_Identity=28.3524904214559, Blast_Score=83, Evalue=1e-16, Organism=Caenorhabditis elegans, GI17565030, Length=257, Percent_Identity=31.1284046692607, Blast_Score=83, Evalue=1e-16, Organism=Caenorhabditis elegans, GI17562906, Length=261, Percent_Identity=29.5019157088123, Blast_Score=83, Evalue=1e-16, Organism=Caenorhabditis elegans, GI17536025, Length=250, Percent_Identity=30.8, Blast_Score=83, Evalue=2e-16, Organism=Caenorhabditis elegans, GI17538182, Length=252, Percent_Identity=30.1587301587302, Blast_Score=82, Evalue=2e-16, Organism=Caenorhabditis elegans, GI193204405, Length=262, Percent_Identity=29.3893129770992, Blast_Score=82, Evalue=2e-16, Organism=Caenorhabditis elegans, GI17561272, Length=210, Percent_Identity=32.3809523809524, Blast_Score=82, Evalue=3e-16, Organism=Caenorhabditis elegans, GI72000259, Length=258, Percent_Identity=27.1317829457364, Blast_Score=81, Evalue=4e-16, Organism=Caenorhabditis elegans, GI17563726, Length=256, Percent_Identity=27.734375, Blast_Score=81, Evalue=5e-16, Organism=Caenorhabditis elegans, GI17551412, Length=260, Percent_Identity=29.2307692307692, Blast_Score=80, Evalue=1e-15, Organism=Caenorhabditis elegans, GI17559104, Length=260, Percent_Identity=28.4615384615385, Blast_Score=79, Evalue=2e-15, Organism=Caenorhabditis elegans, GI17562908, Length=259, Percent_Identity=28.5714285714286, Blast_Score=76, Evalue=2e-14, Organism=Caenorhabditis elegans, GI17531453, Length=261, Percent_Identity=29.5019157088123, Blast_Score=74, Evalue=5e-14, Organism=Caenorhabditis elegans, GI17508651, Length=255, Percent_Identity=26.6666666666667, Blast_Score=72, Evalue=3e-13, Organism=Caenorhabditis elegans, GI17560220, Length=262, Percent_Identity=26.7175572519084, Blast_Score=68, Evalue=5e-12, Organism=Caenorhabditis elegans, GI17508895, Length=190, Percent_Identity=25.7894736842105, Blast_Score=67, Evalue=6e-12, Organism=Saccharomyces cerevisiae, GI6322861, Length=235, Percent_Identity=30.6382978723404, Blast_Score=103, Evalue=3e-23, Organism=Saccharomyces cerevisiae, GI6324126, Length=250, Percent_Identity=26, Blast_Score=74, Evalue=3e-14, Organism=Drosophila melanogaster, GI24639444, Length=249, Percent_Identity=39.3574297188755, Blast_Score=137, Evalue=7e-33, Organism=Drosophila melanogaster, GI23397609, Length=249, Percent_Identity=30.9236947791165, Blast_Score=96, Evalue=2e-20, Organism=Drosophila melanogaster, GI28571526, Length=245, Percent_Identity=32.2448979591837, Blast_Score=95, Evalue=5e-20, Organism=Drosophila melanogaster, GI24643142, Length=239, Percent_Identity=32.6359832635983, Blast_Score=94, Evalue=1e-19, Organism=Drosophila melanogaster, GI21357041, Length=245, Percent_Identity=32.6530612244898, Blast_Score=92, Evalue=4e-19, Organism=Drosophila melanogaster, GI18859837, Length=237, Percent_Identity=30.8016877637131, Blast_Score=90, Evalue=1e-18, Organism=Drosophila melanogaster, GI21355319, Length=244, Percent_Identity=28.2786885245902, Blast_Score=90, Evalue=1e-18, Organism=Drosophila melanogaster, GI24644339, Length=252, Percent_Identity=29.3650793650794, Blast_Score=89, Evalue=2e-18, Organism=Drosophila melanogaster, GI17737361, Length=253, Percent_Identity=30.4347826086957, Blast_Score=89, Evalue=3e-18, Organism=Drosophila melanogaster, GI24644337, Length=169, Percent_Identity=30.7692307692308, Blast_Score=69, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002198 - InterPro: IPR011285 - InterPro: IPR002347 - InterPro: IPR016040 [H]
Pfam domain/function: PF00106 adh_short [H]
EC number: =1.1.1.100 [H]
Molecular weight: Translated: 24675; Mature: 24675
Theoretical pI: Translated: 6.63; Mature: 6.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSSARRALVTGGSGDLGGAICRHLAAQGRHVIVHANGNLARADEVVAAIVADGGSAQAV CCCCCCEEEEECCCCCHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHEEEEECCCCCEEE AFDVADAQASSAALESLLEAGPIQIVVNNAGIHDDAPMAGMNVEQWHRVIDVSLHGFFNV EEECCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCC TQPLLLPMARTRWGRVVSVSSVAAVLGNRGQTNYAAAKAALHGASKSLSREMASRGIAVN HHHHHHHHHHHCCCCEEEHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEE VVAPGVIESDMVGDSFAPEAIKQLVPAGRVGKPDEVAALVAFLCSDAAGYINGQVIGVNG EECCCCCCCCCCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEECC GMG CCC >Mature Secondary Structure MNSSARRALVTGGSGDLGGAICRHLAAQGRHVIVHANGNLARADEVVAAIVADGGSAQAV CCCCCCEEEEECCCCCHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHEEEEECCCCCEEE AFDVADAQASSAALESLLEAGPIQIVVNNAGIHDDAPMAGMNVEQWHRVIDVSLHGFFNV EEECCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCC TQPLLLPMARTRWGRVVSVSSVAAVLGNRGQTNYAAAKAALHGASKSLSREMASRGIAVN HHHHHHHHHHHCCCCEEEHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEE VVAPGVIESDMVGDSFAPEAIKQLVPAGRVGKPDEVAALVAFLCSDAAGYINGQVIGVNG EECCCCCCCCCCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEECC GMG CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9020051 [H]