| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21244681
Identifier: 21244681
GI number: 21244681
Start: 4658248
End: 4658568
Strand: Direct
Name: 21244681
Synonym: XAC3962
Alternate gene names: NA
Gene position: 4658248-4658568 (Clockwise)
Preceding gene: 21244680
Following gene: 21244682
Centisome position: 90.0
GC content: 64.17
Gene sequence:
>321_bases ATGTCAGACCTCGCGTCACCGGGCGACATGCGGGCGCGCAGCACGCGCGATGAGGTGTCATCCCGTCTGCCATCGGCACA TCGTCCTCTTTGCGAGGCGAAACTGGCCCGCAGCACCGACGCGCGACGCCTCGCCCAATGCTCCGCATGCGGCACCTCGG CGAAGCATCTGACTGCCCCATTCTCTCCAAGCGATGGAAGCATCGCAGGAGACGGCTTCCGTAGCCTACGAAAACCAAGA GGCAGCACGCAGCATGAGCGCGTCCAGTGTGTAGCTTGGGCATGGGTCACGCGACACACTGGCCAACAGCACGCCGCTTG A
Upstream 100 bases:
>100_bases GGTGAAAGGGACATCGCAGGCGGTCGGCGTCGTGCCAGACGACGGATCTTCAGCGACGTGGCGGGCACGGCATCGGCCTT GCGAGCCACCCTGATCCAAC
Downstream 100 bases:
>100_bases ATTGCGTGACGATTGCTCGCCGCGCGCAGGGCTGGCTCGCTTGATCCTGGTTTTCGAAATCGTGTCATCGCCTGCGTCGA CCATCCCACGCAAGGGGTAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 106; Mature: 105
Protein sequence:
>106_residues MSDLASPGDMRARSTRDEVSSRLPSAHRPLCEAKLARSTDARRLAQCSACGTSAKHLTAPFSPSDGSIAGDGFRSLRKPR GSTQHERVQCVAWAWVTRHTGQQHAA
Sequences:
>Translated_106_residues MSDLASPGDMRARSTRDEVSSRLPSAHRPLCEAKLARSTDARRLAQCSACGTSAKHLTAPFSPSDGSIAGDGFRSLRKPR GSTQHERVQCVAWAWVTRHTGQQHAA >Mature_105_residues SDLASPGDMRARSTRDEVSSRLPSAHRPLCEAKLARSTDARRLAQCSACGTSAKHLTAPFSPSDGSIAGDGFRSLRKPRG STQHERVQCVAWAWVTRHTGQQHAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11456; Mature: 11325
Theoretical pI: Translated: 10.91; Mature: 10.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.8 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 3.8 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDLASPGDMRARSTRDEVSSRLPSAHRPLCEAKLARSTDARRLAQCSACGTSAKHLTAP CCCCCCCCCCCHHCCHHHHHHHCCCCCCCHHHHHHHCCCHHHHHHHHHHCCCCCCCEECC FSPSDGSIAGDGFRSLRKPRGSTQHERVQCVAWAWVTRHTGQQHAA CCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure SDLASPGDMRARSTRDEVSSRLPSAHRPLCEAKLARSTDARRLAQCSACGTSAKHLTAP CCCCCCCCCCHHCCHHHHHHHCCCCCCCHHHHHHHCCCHHHHHHHHHHCCCCCCCEECC FSPSDGSIAGDGFRSLRKPRGSTQHERVQCVAWAWVTRHTGQQHAA CCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA