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The map label for this gene is ybbK [C]

Identifier: 21244682

GI number: 21244682

Start: 4659783

End: 4660907

Strand: Direct

Name: ybbK [C]

Synonym: XAC3964

Alternate gene names: 21244682

Gene position: 4659783-4660907 (Clockwise)

Preceding gene: 21244681

Following gene: 21244683

Centisome position: 90.03

GC content: 65.16

Gene sequence:

>1125_bases
ATGTTCTGGACCAAGCGGGTCGTGATCGGTGACGGCGAGCGCGGCCTGGTGTATCGAAACCGTCGGTTCGAGCGCGTGCT
CGTCCCCGGCGTCTATCGCCTCTTCGACCCGTTGGGTCGCAGCGAGGTCATCGTCCACGCCATCACGCAAGGCGCCTATG
TGGGCCGCGACGCGGAGATGCTGTTCGACACGCTCGGCAGCACCCTGCCGCAACACTTCGTGTTGGCCGACATCGGCACC
GCGCAGGTCGGCTTGCTGATCCGCAACGGCAAGCTCGACGACGTGCTGCCACCGGGCACGCGCACGCTGTACTGGCGTGG
TCCGGCGGCAATCGAGCTGCAGACCCTGCCATTGGGCGAGGGGCTGCAGGTGCCCGCCGATGTGCAACGCAGGCTGCGTC
AGCTCGGCACGCTGTCGCGCGTAGCGGTCTGCATGGACGTGCCGGCCGAGTCGCAGGGACTGGTGTTCGTCGACGGCAAG
CTGGTTGCACCGTTCGGGCCGGGGGCGTATGCGTTCTGGAACTTCCAGAAGAACATCGCCACCGACGTGATCGATCTGCG
CGTGCAGTCGGTCGAAGTGTCCGGGCAGGAGCTGTTGACGCGCGACAAGGTGTCGTTGCGGGTCAACCTGGCCGCCAGCA
TGCGCGTCACCGATGCGGTGGCGATGCGCACGCGCGTGGCCAAGGCCGGCGATTACCTATATCGCGAGTTGCAGTACGGC
TTGCGGCGCGCGGTCTCGGCCAAGACGCTGGACGAGTTGTTGGGCGACAAGGCCTGCCTGGATGCAGATATCTTCGGGTA
TGTGCGGGGCAGCGTGAGCGGCTTCGGCATCGAGGTGCTGGGCGTCGGCGTCAAGGACGTGATCCTGCCGGGCGAGATGC
GCGAGATCCTCAACGCGGTCGTGCAGGCGGAGAAGCAGGCGCAAGCCAACGTCATCCGTCGGCGCGAAGAGGCCAATGCC
ACGCGCTCGTTGCTCAACACCGCCAAGTTGATCGAGGACAGCCCGGTGCTGATGCGTTTGAAGGAACTGGAGGCGCTGGA
AAAGGTCACCGAAAAGATCGACAAGCTCACCGTGTTCGGCGGCCTGGATGGCGTGCTGAAGCAATTGGTGACGATCAGGC
AATGA

Upstream 100 bases:

>100_bases
CGTTGCATCGGCACACGTTCCGCCAGCAGTCCGATCCGGGCAGCGGGACGGCTGTAGCCCCGGATCGGACCACCGGAGCC
AAACCTAAGGAGAAGTGCCA

Downstream 100 bases:

>100_bases
AGGTAGTGCGTGGCGGAAGGATCTGCCACGCACTGCCGCAAGGGAATGACAACAATGAGTACATCGCAACACTTTGAATT
TCTGCACGCCGAAGGCAGCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 374; Mature: 374

Protein sequence:

>374_residues
MFWTKRVVIGDGERGLVYRNRRFERVLVPGVYRLFDPLGRSEVIVHAITQGAYVGRDAEMLFDTLGSTLPQHFVLADIGT
AQVGLLIRNGKLDDVLPPGTRTLYWRGPAAIELQTLPLGEGLQVPADVQRRLRQLGTLSRVAVCMDVPAESQGLVFVDGK
LVAPFGPGAYAFWNFQKNIATDVIDLRVQSVEVSGQELLTRDKVSLRVNLAASMRVTDAVAMRTRVAKAGDYLYRELQYG
LRRAVSAKTLDELLGDKACLDADIFGYVRGSVSGFGIEVLGVGVKDVILPGEMREILNAVVQAEKQAQANVIRRREEANA
TRSLLNTAKLIEDSPVLMRLKELEALEKVTEKIDKLTVFGGLDGVLKQLVTIRQ

Sequences:

>Translated_374_residues
MFWTKRVVIGDGERGLVYRNRRFERVLVPGVYRLFDPLGRSEVIVHAITQGAYVGRDAEMLFDTLGSTLPQHFVLADIGT
AQVGLLIRNGKLDDVLPPGTRTLYWRGPAAIELQTLPLGEGLQVPADVQRRLRQLGTLSRVAVCMDVPAESQGLVFVDGK
LVAPFGPGAYAFWNFQKNIATDVIDLRVQSVEVSGQELLTRDKVSLRVNLAASMRVTDAVAMRTRVAKAGDYLYRELQYG
LRRAVSAKTLDELLGDKACLDADIFGYVRGSVSGFGIEVLGVGVKDVILPGEMREILNAVVQAEKQAQANVIRRREEANA
TRSLLNTAKLIEDSPVLMRLKELEALEKVTEKIDKLTVFGGLDGVLKQLVTIRQ
>Mature_374_residues
MFWTKRVVIGDGERGLVYRNRRFERVLVPGVYRLFDPLGRSEVIVHAITQGAYVGRDAEMLFDTLGSTLPQHFVLADIGT
AQVGLLIRNGKLDDVLPPGTRTLYWRGPAAIELQTLPLGEGLQVPADVQRRLRQLGTLSRVAVCMDVPAESQGLVFVDGK
LVAPFGPGAYAFWNFQKNIATDVIDLRVQSVEVSGQELLTRDKVSLRVNLAASMRVTDAVAMRTRVAKAGDYLYRELQYG
LRRAVSAKTLDELLGDKACLDADIFGYVRGSVSGFGIEVLGVGVKDVILPGEMREILNAVVQAEKQAQANVIRRREEANA
TRSLLNTAKLIEDSPVLMRLKELEALEKVTEKIDKLTVFGGLDGVLKQLVTIRQ

Specific function: Unknown

COG id: COG0330

COG function: function code O; Membrane protease subunits, stomatin/prohibitin homologs

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the band 7/mec-2 family [H]

Homologues:

Organism=Homo sapiens, GI38016911, Length=220, Percent_Identity=25, Blast_Score=72, Evalue=1e-12,
Organism=Homo sapiens, GI221316744, Length=176, Percent_Identity=27.2727272727273, Blast_Score=68, Evalue=2e-11,
Organism=Homo sapiens, GI21686995, Length=176, Percent_Identity=27.2727272727273, Blast_Score=68, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI17569497, Length=188, Percent_Identity=31.9148936170213, Blast_Score=86, Evalue=3e-17,
Organism=Caenorhabditis elegans, GI32566490, Length=216, Percent_Identity=29.6296296296296, Blast_Score=79, Evalue=6e-15,
Organism=Caenorhabditis elegans, GI71987621, Length=176, Percent_Identity=30.6818181818182, Blast_Score=77, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI17569493, Length=228, Percent_Identity=29.8245614035088, Blast_Score=77, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI193209764, Length=228, Percent_Identity=29.8245614035088, Blast_Score=77, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI25153583, Length=176, Percent_Identity=30.6818181818182, Blast_Score=76, Evalue=3e-14,
Organism=Caenorhabditis elegans, GI71987612, Length=176, Percent_Identity=30.6818181818182, Blast_Score=75, Evalue=6e-14,
Organism=Caenorhabditis elegans, GI17570459, Length=176, Percent_Identity=29.5454545454545, Blast_Score=75, Evalue=8e-14,
Organism=Caenorhabditis elegans, GI193210507, Length=179, Percent_Identity=30.7262569832402, Blast_Score=73, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI17570161, Length=179, Percent_Identity=30.7262569832402, Blast_Score=72, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI17569499, Length=198, Percent_Identity=27.2727272727273, Blast_Score=70, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI71989948, Length=208, Percent_Identity=27.8846153846154, Blast_Score=65, Evalue=8e-11,
Organism=Drosophila melanogaster, GI21356845, Length=207, Percent_Identity=27.536231884058, Blast_Score=76, Evalue=4e-14,
Organism=Drosophila melanogaster, GI281365664, Length=220, Percent_Identity=27.7272727272727, Blast_Score=74, Evalue=2e-13,
Organism=Drosophila melanogaster, GI24657857, Length=220, Percent_Identity=27.7272727272727, Blast_Score=73, Evalue=3e-13,
Organism=Drosophila melanogaster, GI62484448, Length=220, Percent_Identity=27.7272727272727, Blast_Score=73, Evalue=3e-13,
Organism=Drosophila melanogaster, GI62484274, Length=220, Percent_Identity=27.7272727272727, Blast_Score=73, Evalue=4e-13,
Organism=Drosophila melanogaster, GI28573263, Length=207, Percent_Identity=24.1545893719807, Blast_Score=70, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001107
- InterPro:   IPR018080
- InterPro:   IPR001972 [H]

Pfam domain/function: PF01145 Band_7 [H]

EC number: NA

Molecular weight: Translated: 41242; Mature: 41242

Theoretical pI: Translated: 9.23; Mature: 9.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFWTKRVVIGDGERGLVYRNRRFERVLVPGVYRLFDPLGRSEVIVHAITQGAYVGRDAEM
CCEEEEEEEECCCCCEEEECCCCCEEHHHHHHHHHCCCCCCCEEEEEECCCCCCCCHHHH
LFDTLGSTLPQHFVLADIGTAQVGLLIRNGKLDDVLPPGTRTLYWRGPAAIELQTLPLGE
HHHHHHHHCCCCEEEEECCCCEEEEEEECCCCCCCCCCCCCEEEEECCCEEEEEEECCCC
GLQVPADVQRRLRQLGTLSRVAVCMDVPAESQGLVFVDGKLVAPFGPGAYAFWNFQKNIA
CCCCCHHHHHHHHHHCCHHHHHEEEECCCCCCCEEEECCEEEECCCCCCEEEEECHHHHH
TDVIDLRVQSVEVSGQELLTRDKVSLRVNLAASMRVTDAVAMRTRVAKAGDYLYRELQYG
HHHHHHEEEEEECCCHHHHHCCCEEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LRRAVSAKTLDELLGDKACLDADIFGYVRGSVSGFGIEVLGVGVKDVILPGEMREILNAV
HHHHHHHHHHHHHHCCCHHCCHHHHHHHHCCCCCCCEEEEECCHHHEECCHHHHHHHHHH
VQAEKQAQANVIRRREEANATRSLLNTAKLIEDSPVLMRLKELEALEKVTEKIDKLTVFG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHEEEEC
GLDGVLKQLVTIRQ
CHHHHHHHHHHCCC
>Mature Secondary Structure
MFWTKRVVIGDGERGLVYRNRRFERVLVPGVYRLFDPLGRSEVIVHAITQGAYVGRDAEM
CCEEEEEEEECCCCCEEEECCCCCEEHHHHHHHHHCCCCCCCEEEEEECCCCCCCCHHHH
LFDTLGSTLPQHFVLADIGTAQVGLLIRNGKLDDVLPPGTRTLYWRGPAAIELQTLPLGE
HHHHHHHHCCCCEEEEECCCCEEEEEEECCCCCCCCCCCCCEEEEECCCEEEEEEECCCC
GLQVPADVQRRLRQLGTLSRVAVCMDVPAESQGLVFVDGKLVAPFGPGAYAFWNFQKNIA
CCCCCHHHHHHHHHHCCHHHHHEEEECCCCCCCEEEECCEEEECCCCCCEEEEECHHHHH
TDVIDLRVQSVEVSGQELLTRDKVSLRVNLAASMRVTDAVAMRTRVAKAGDYLYRELQYG
HHHHHHEEEEEECCCHHHHHCCCEEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LRRAVSAKTLDELLGDKACLDADIFGYVRGSVSGFGIEVLGVGVKDVILPGEMREILNAV
HHHHHHHHHHHHHHCCCHHCCHHHHHHHHCCCCCCCEEEEECCHHHEECCHHHHHHHHHH
VQAEKQAQANVIRRREEANATRSLLNTAKLIEDSPVLMRLKELEALEKVTEKIDKLTVFG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHEEEEC
GLDGVLKQLVTIRQ
CHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9389475 [H]