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The map label for this gene is 21244562

Identifier: 21244562

GI number: 21244562

Start: 4516882

End: 4517556

Strand: Direct

Name: 21244562

Synonym: XAC3838

Alternate gene names: NA

Gene position: 4516882-4517556 (Clockwise)

Preceding gene: 21244561

Following gene: 21244563

Centisome position: 87.27

GC content: 66.37

Gene sequence:

>675_bases
ATGAGTTACGGAGTGAAGCTCCACGTCTGGGGCGAACGAGCGCTGTTCACGCGGCCGGAAATGAAGGTGGAACGCGTCTC
ATACGACATCATCACGCCATCGGCGGCGCGCGGCATCCTGGAGGCGATCCACTGGAAACCGGCGATCCGCTGGATGGTGG
ACAGCATCCAGGTGCTCAAGCCGATTCGCTTCGAGTCGATCCGCCGCAACGAAGTGGGCGGCAAGCTGTCTGCCGCCAGC
GTGAGCAAGGCGATCAAGGCCGGGCGCACCGATACGCTGGTGAGCTACGTCGAGGAGGACCGCCAACAACGCGCCGCCAC
GCTCCTGCGCGACGTGGGTTACGTGATCGCTGCACACTTCGAATTGACCGACAAGGCGGGCGCCGACGACAACGTCGGCA
AGCACCTGGACATCTTCAACCGCCGTGCGCGGCGCGGGCAGTGCTTCCAGGCCCCGTGCCTGGGCACGCGCGAATTCCCG
GCCAGCTTCGCGCTGATCGAAGACGACGCGGCGATGCCGGCTGCCGATGCAACGCTGGCCGGCGAGCGCGACCTGGGCTG
GATGCTGCACGACATCGACTTCGCCGACGGCATGACCCCGCGCTTCTTCCGCGCACGCATGGTCGATGGCCAGGTCGAGG
TGCCAGCGCCGGAAAACGGTGGGGTGCGCGCATGA

Upstream 100 bases:

>100_bases
CTCTGGTCCAGTGAGCTAAGGCAACCCCGATCCAAATCTCGGCATTTGAGATACCAGCCAGGTAGGCTAGCTTGTGAAAC
GCTAGCTAGGGGACACAAGG

Downstream 100 bases:

>100_bases
TCCTGTCCGCACTTGCCGACTACTACCACCGGCTGCTGGACGATCCCACATCGGGGATCGCCGCGCCCGGCTACAGCCAG
GAGAAGATCGGCTACACCAT

Product: hypothetical protein

Products: NA

Alternate protein names: CRISPR-Associated Cas5 Family Protein; CRISPR-Associated Dvulg Subtype; CRISPR-Associated Csd1 Family Protein; CRISPR-Associated Cas5d Family Protein; Cas5 Family CRISPR-Associated Protein; CRISPR-Associated RAMP Csd5d Family Protein; CRISPR-Associated D; CRISPR-Associated Protein Csd5d Family; CRISPR-Associated Protein; Crispr- Family

Number of amino acids: Translated: 224; Mature: 223

Protein sequence:

>224_residues
MSYGVKLHVWGERALFTRPEMKVERVSYDIITPSAARGILEAIHWKPAIRWMVDSIQVLKPIRFESIRRNEVGGKLSAAS
VSKAIKAGRTDTLVSYVEEDRQQRAATLLRDVGYVIAAHFELTDKAGADDNVGKHLDIFNRRARRGQCFQAPCLGTREFP
ASFALIEDDAAMPAADATLAGERDLGWMLHDIDFADGMTPRFFRARMVDGQVEVPAPENGGVRA

Sequences:

>Translated_224_residues
MSYGVKLHVWGERALFTRPEMKVERVSYDIITPSAARGILEAIHWKPAIRWMVDSIQVLKPIRFESIRRNEVGGKLSAAS
VSKAIKAGRTDTLVSYVEEDRQQRAATLLRDVGYVIAAHFELTDKAGADDNVGKHLDIFNRRARRGQCFQAPCLGTREFP
ASFALIEDDAAMPAADATLAGERDLGWMLHDIDFADGMTPRFFRARMVDGQVEVPAPENGGVRA
>Mature_223_residues
SYGVKLHVWGERALFTRPEMKVERVSYDIITPSAARGILEAIHWKPAIRWMVDSIQVLKPIRFESIRRNEVGGKLSAASV
SKAIKAGRTDTLVSYVEEDRQQRAATLLRDVGYVIAAHFELTDKAGADDNVGKHLDIFNRRARRGQCFQAPCLGTREFPA
SFALIEDDAAMPAADATLAGERDLGWMLHDIDFADGMTPRFFRARMVDGQVEVPAPENGGVRA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24914; Mature: 24783

Theoretical pI: Translated: 7.63; Mature: 7.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSYGVKLHVWGERALFTRPEMKVERVSYDIITPSAARGILEAIHWKPAIRWMVDSIQVLK
CCCCEEEEEECCCEEEECCCCEEEHEEEEEECCHHHHHHHHHHHCCHHHHHHHHHHHHHC
PIRFESIRRNEVGGKLSAASVSKAIKAGRTDTLVSYVEEDRQQRAATLLRDVGYVIAAHF
CHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEE
ELTDKAGADDNVGKHLDIFNRRARRGQCFQAPCLGTREFPASFALIEDDAAMPAADATLA
EECCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCC
GERDLGWMLHDIDFADGMTPRFFRARMVDGQVEVPAPENGGVRA
CCCCCCCEEEECCCCCCCCHHHHHHHCCCCEEECCCCCCCCCCC
>Mature Secondary Structure 
SYGVKLHVWGERALFTRPEMKVERVSYDIITPSAARGILEAIHWKPAIRWMVDSIQVLK
CCCEEEEEECCCEEEECCCCEEEHEEEEEECCHHHHHHHHHHHCCHHHHHHHHHHHHHC
PIRFESIRRNEVGGKLSAASVSKAIKAGRTDTLVSYVEEDRQQRAATLLRDVGYVIAAHF
CHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEE
ELTDKAGADDNVGKHLDIFNRRARRGQCFQAPCLGTREFPASFALIEDDAAMPAADATLA
EECCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCC
GERDLGWMLHDIDFADGMTPRFFRARMVDGQVEVPAPENGGVRA
CCCCCCCEEEECCCCCCCCHHHHHHHCCCCEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA