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The map label for this gene is 21244561

Identifier: 21244561

GI number: 21244561

Start: 4514501

End: 4516795

Strand: Direct

Name: 21244561

Synonym: XAC3837

Alternate gene names: NA

Gene position: 4514501-4516795 (Clockwise)

Preceding gene: 21244560

Following gene: 21244562

Centisome position: 87.23

GC content: 65.66

Gene sequence:

>2295_bases
ATGGACTTCTTTGCGCATTCGACCAAGCGGCAGGATCGCAGCGATTGGCAACGGCTGGCCGATCACCTACTCGCCGTCGG
CGAACGCGCCGCCAGGAATGCCGCACCGTTTGGAGGCCAACTTCTGGCCAGTCTGGCCGGACAACTGCACGACCTCGGCA
AGTACACACAGAAATTTCAGGGCCGGCTGGACGGTGACCCGGCCCGTGTCGACCATGCGACCTGGGGCGCTCGGATCGCC
TGCGAGCGCTATGGTACCGCCGGCACCTTGCTCGCGTACGGCATCGCCGGCCATCACGCCGGCCTAGCCGATGGACGACC
AGGACACGCAGCGCAATCACGCCCTTCGCTGCACGAGCGCCTATCGGAGGACTACCGCGAACGGGAACTGCCACCGCTGC
TGTCGGACTGGGAACGGGAGTTGTCACTCCCGGCCAAGCTGGCGTTGCCGGACGGCTTTATTGGTCATCCGCGCCAGGAG
CGTCGCCCTTTTCAGCTCACGGTCCTGACGCGGATGATCTTCTCCTGCCTGGTCGATTCCGACTTCACCGAGACCGACGA
TTTCTATCGCCGCCTGGAAGGGCGCCAGTCGCGTGCGGAGGACACCGGCACGCGTCCGGCCCTGCCAGAATTACGGCAAT
GCCTTGATGCGCACCTGTCCACGTTGCCCACCGAGGGCGGCATCAACCCCTTGCGCGCGCAGATCCTGAGCGAAGTTCGT
GCCAAGGCCGGCATGCGTCCTGGTCTGTTCTCCCTCACCGTACCCACCGGCGGCGGCAAGACGCTGGCTTCACTGGCATT
CGCCCTGGACCATGCCATCGCCCATGGATTGCGCCGGGTGATCTACGTGATTCCGTTCACCAGCATCGTCGAACAGACCG
TACAGGTGTTTCGGCACGCATTGGGCGTGCAGGAGCGCGACGACATCGTGCTGGAGCACCACAGCGCCTTCTTCGACGAT
CCGACCAAGGCACCGCAATCCATCGACAAGCGCAAATTGGCCATGGAGAACTGGGATGCGCCGATCGTCGTTACCACCGC
AGTGCAGTTCTTCGAGAGCCTGTTCGCCGATCGTCCTTCCCGCTGCCGCAAGCTGCACAACATCGCCGGCAGCGTGGTGG
TTCTGGACGAAGCGCAGACCCTGCCGCACGCATTGCTGCGCCCGTGCGTGGCGCTACTGGACGAACTGGCGCGCAACTAC
CGGGTCAGTCCGGTGTTGTGCACCGCCACGCAACCCACGCTGCGCCTGGACCAGGGCTTCGTTGGGGGTCTGGACCAGGT
GCGAGAGCTGGTGGACGACCCACCGGCGCTGTATGCAAGGCTACGACGCGTCCAGGTGCGCCACGTCGGCACGCTCGACG
ACGCTGCGCTGACCGACCACCTCCGGCAACGCGAACAGGTGCTGTGCATCGTCAACAATCGTCGCCACGCGCGGCACCTG
TTCGACGCGATCGCCGACCGACCCGGTGCACGGCACTTGACCACGCTGATGCACGCGCGCCACCGCAGCGCGGTGCTGGC
CGAACTGCGCGAAGACCTGAAAGCAGGCCGGCCATGCCGGCTGGTCGCCACGAGCTTGATAGAAGCGGGGGTGGACGTGG
ACTTCCCAACGGTGCTGCGCGCTGAAGCCGGTCTGGATTCCATCGCCCAGGCTGCCGGCCGCTGCAACCGCGAAGGCTTG
CGGCCGGTAGAGGTCAGCCAAGTGCAGGTATTCGCGCCGGCCAATCCCGACTGGGCACCGCCAAAGGAACTAGACCTGTT
TGCAGAGGTCTTCCGTGGCATCGAGCGTACCCACCGCAACGACTTGCTGGCGATGGCAGCAGTCGCCGACTACTTCGCGG
CGCTCTATCGTCGCCTGGGCGATGGACGGCTCGACCGCGAGGACGTGCTCGGCCTGCTGCGCGATGCCGACATCAAGGGT
TTGCCGCTGGACACCCTGGCGCGGAAATTCAAGATGATCCAGACCACCCTGCGGCCGCTGATCGTACCGTACGCCCCCTA
CGCCGAAGGCTGCGACAAAGAGGTGCCCGAGGTGGCCGACATCCTGCGCCAGCTCGAACATGCAGAACACGTGGGCGTAG
CCGGCGCTGCCCGACGCCTGCAGCCGTGGCTGGTGCAGGTGCCCGAGCAGGCCTACCGCGCGCTGTGGCAGGCCAATGCC
ATCGCCCCGGTGGCACAGGCGCGCTATGGCGAACAGTTCGTGAGGCTGGTCAATCCAAGACTGTACGACCCGCGATTCGG
GCTGCGCTGGGACGACAGCCCGCAGTTCCTGGCAGCCGAGGCTCTGGTCCAGTGA

Upstream 100 bases:

>100_bases
AAACCCCGCTGATGCACAGCGGCGGCGCGATGCAGACGCTCCACTGCAGGGGCAGACAGCATCGGCCTGCTCTCACCAAG
GCCACAAACGGAGCAACGCC

Downstream 100 bases:

>100_bases
GCTAAGGCAACCCCGATCCAAATCTCGGCATTTGAGATACCAGCCAGGTAGGCTAGCTTGTGAAACGCTAGCTAGGGGAC
ACAAGGATGAGTTACGGAGT

Product: hypothetical protein

Products: NA

Alternate protein names: Helicase; CRISPR-Associated Helicase Cas3 Family Protein Protein; CRISPR-Associated Helicase Cas3 Domain Protein; CRISPR-Associated HD Domain Protein; CRISPR-Associated Helicase Cas3 Domain-Containing Protein; ATP-Dependent RNA Helicase; CRISPR-Associated Helicase; DEAD/DEAH Box Helicase Domain-Containing Protein; Crispr-Associated Helicase Cas3 Domain Protein; Crispr-Associated Hd Domain Protein; Helicases; CRISPR-Associated Helicase Cas3 Core; CRISPR-Associated Helicase Cas3 Family; Helicase-Like Protein; Cas3 Family CRISPR-Associated Helicase; Helicases-Like Protein; CRISPR-Associated Helicase Cas3 Protein; CRISPR-Associated HD Domain-Containing Protein; ATP-Dependent RNA Helicase SrmB

Number of amino acids: Translated: 764; Mature: 764

Protein sequence:

>764_residues
MDFFAHSTKRQDRSDWQRLADHLLAVGERAARNAAPFGGQLLASLAGQLHDLGKYTQKFQGRLDGDPARVDHATWGARIA
CERYGTAGTLLAYGIAGHHAGLADGRPGHAAQSRPSLHERLSEDYRERELPPLLSDWERELSLPAKLALPDGFIGHPRQE
RRPFQLTVLTRMIFSCLVDSDFTETDDFYRRLEGRQSRAEDTGTRPALPELRQCLDAHLSTLPTEGGINPLRAQILSEVR
AKAGMRPGLFSLTVPTGGGKTLASLAFALDHAIAHGLRRVIYVIPFTSIVEQTVQVFRHALGVQERDDIVLEHHSAFFDD
PTKAPQSIDKRKLAMENWDAPIVVTTAVQFFESLFADRPSRCRKLHNIAGSVVVLDEAQTLPHALLRPCVALLDELARNY
RVSPVLCTATQPTLRLDQGFVGGLDQVRELVDDPPALYARLRRVQVRHVGTLDDAALTDHLRQREQVLCIVNNRRHARHL
FDAIADRPGARHLTTLMHARHRSAVLAELREDLKAGRPCRLVATSLIEAGVDVDFPTVLRAEAGLDSIAQAAGRCNREGL
RPVEVSQVQVFAPANPDWAPPKELDLFAEVFRGIERTHRNDLLAMAAVADYFAALYRRLGDGRLDREDVLGLLRDADIKG
LPLDTLARKFKMIQTTLRPLIVPYAPYAEGCDKEVPEVADILRQLEHAEHVGVAGAARRLQPWLVQVPEQAYRALWQANA
IAPVAQARYGEQFVRLVNPRLYDPRFGLRWDDSPQFLAAEALVQ

Sequences:

>Translated_764_residues
MDFFAHSTKRQDRSDWQRLADHLLAVGERAARNAAPFGGQLLASLAGQLHDLGKYTQKFQGRLDGDPARVDHATWGARIA
CERYGTAGTLLAYGIAGHHAGLADGRPGHAAQSRPSLHERLSEDYRERELPPLLSDWERELSLPAKLALPDGFIGHPRQE
RRPFQLTVLTRMIFSCLVDSDFTETDDFYRRLEGRQSRAEDTGTRPALPELRQCLDAHLSTLPTEGGINPLRAQILSEVR
AKAGMRPGLFSLTVPTGGGKTLASLAFALDHAIAHGLRRVIYVIPFTSIVEQTVQVFRHALGVQERDDIVLEHHSAFFDD
PTKAPQSIDKRKLAMENWDAPIVVTTAVQFFESLFADRPSRCRKLHNIAGSVVVLDEAQTLPHALLRPCVALLDELARNY
RVSPVLCTATQPTLRLDQGFVGGLDQVRELVDDPPALYARLRRVQVRHVGTLDDAALTDHLRQREQVLCIVNNRRHARHL
FDAIADRPGARHLTTLMHARHRSAVLAELREDLKAGRPCRLVATSLIEAGVDVDFPTVLRAEAGLDSIAQAAGRCNREGL
RPVEVSQVQVFAPANPDWAPPKELDLFAEVFRGIERTHRNDLLAMAAVADYFAALYRRLGDGRLDREDVLGLLRDADIKG
LPLDTLARKFKMIQTTLRPLIVPYAPYAEGCDKEVPEVADILRQLEHAEHVGVAGAARRLQPWLVQVPEQAYRALWQANA
IAPVAQARYGEQFVRLVNPRLYDPRFGLRWDDSPQFLAAEALVQ
>Mature_764_residues
MDFFAHSTKRQDRSDWQRLADHLLAVGERAARNAAPFGGQLLASLAGQLHDLGKYTQKFQGRLDGDPARVDHATWGARIA
CERYGTAGTLLAYGIAGHHAGLADGRPGHAAQSRPSLHERLSEDYRERELPPLLSDWERELSLPAKLALPDGFIGHPRQE
RRPFQLTVLTRMIFSCLVDSDFTETDDFYRRLEGRQSRAEDTGTRPALPELRQCLDAHLSTLPTEGGINPLRAQILSEVR
AKAGMRPGLFSLTVPTGGGKTLASLAFALDHAIAHGLRRVIYVIPFTSIVEQTVQVFRHALGVQERDDIVLEHHSAFFDD
PTKAPQSIDKRKLAMENWDAPIVVTTAVQFFESLFADRPSRCRKLHNIAGSVVVLDEAQTLPHALLRPCVALLDELARNY
RVSPVLCTATQPTLRLDQGFVGGLDQVRELVDDPPALYARLRRVQVRHVGTLDDAALTDHLRQREQVLCIVNNRRHARHL
FDAIADRPGARHLTTLMHARHRSAVLAELREDLKAGRPCRLVATSLIEAGVDVDFPTVLRAEAGLDSIAQAAGRCNREGL
RPVEVSQVQVFAPANPDWAPPKELDLFAEVFRGIERTHRNDLLAMAAVADYFAALYRRLGDGRLDREDVLGLLRDADIKG
LPLDTLARKFKMIQTTLRPLIVPYAPYAEGCDKEVPEVADILRQLEHAEHVGVAGAARRLQPWLVQVPEQAYRALWQANA
IAPVAQARYGEQFVRLVNPRLYDPRFGLRWDDSPQFLAAEALVQ

Specific function: Unknown

COG id: COG1203

COG function: function code R; Predicted helicases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 85181; Mature: 85181

Theoretical pI: Translated: 7.43; Mature: 7.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDFFAHSTKRQDRSDWQRLADHLLAVGERAARNAAPFGGQLLASLAGQLHDLGKYTQKFQ
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHC
GRLDGDPARVDHATWGARIACERYGTAGTLLAYGIAGHHAGLADGRPGHAAQSRPSLHER
CCCCCCCHHCCCHHCCCHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHH
LSEDYRERELPPLLSDWERELSLPAKLALPDGFIGHPRQERRPFQLTVLTRMIFSCLVDS
HHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHCC
DFTETDDFYRRLEGRQSRAEDTGTRPALPELRQCLDAHLSTLPTEGGINPLRAQILSEVR
CCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
AKAGMRPGLFSLTVPTGGGKTLASLAFALDHAIAHGLRRVIYVIPFTSIVEQTVQVFRHA
HHCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGVQERDDIVLEHHSAFFDDPTKAPQSIDKRKLAMENWDAPIVVTTAVQFFESLFADRPS
HCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCH
RCRKLHNIAGSVVVLDEAQTLPHALLRPCVALLDELARNYRVSPVLCTATQPTLRLDQGF
HHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCC
VGGLDQVRELVDDPPALYARLRRVQVRHVGTLDDAALTDHLRQREQVLCIVNNRRHARHL
CCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHEEEEECCCHHHHHH
FDAIADRPGARHLTTLMHARHRSAVLAELREDLKAGRPCRLVATSLIEAGVDVDFPTVLR
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHH
AEAGLDSIAQAAGRCNREGLRPVEVSQVQVFAPANPDWAPPKELDLFAEVFRGIERTHRN
HHCCHHHHHHHHHCCCCCCCCCEEECEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHH
DLLAMAAVADYFAALYRRLGDGRLDREDVLGLLRDADIKGLPLDTLARKFKMIQTTLRPL
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH
IVPYAPYAEGCDKEVPEVADILRQLEHAEHVGVAGAARRLQPWLVQVPEQAYRALWQANA
HCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHCHHHHHCHHHHHHHHHHHCC
IAPVAQARYGEQFVRLVNPRLYDPRFGLRWDDSPQFLAAEALVQ
CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHCC
>Mature Secondary Structure
MDFFAHSTKRQDRSDWQRLADHLLAVGERAARNAAPFGGQLLASLAGQLHDLGKYTQKFQ
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHC
GRLDGDPARVDHATWGARIACERYGTAGTLLAYGIAGHHAGLADGRPGHAAQSRPSLHER
CCCCCCCHHCCCHHCCCHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHH
LSEDYRERELPPLLSDWERELSLPAKLALPDGFIGHPRQERRPFQLTVLTRMIFSCLVDS
HHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHCC
DFTETDDFYRRLEGRQSRAEDTGTRPALPELRQCLDAHLSTLPTEGGINPLRAQILSEVR
CCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
AKAGMRPGLFSLTVPTGGGKTLASLAFALDHAIAHGLRRVIYVIPFTSIVEQTVQVFRHA
HHCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGVQERDDIVLEHHSAFFDDPTKAPQSIDKRKLAMENWDAPIVVTTAVQFFESLFADRPS
HCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCH
RCRKLHNIAGSVVVLDEAQTLPHALLRPCVALLDELARNYRVSPVLCTATQPTLRLDQGF
HHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCC
VGGLDQVRELVDDPPALYARLRRVQVRHVGTLDDAALTDHLRQREQVLCIVNNRRHARHL
CCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHEEEEECCCHHHHHH
FDAIADRPGARHLTTLMHARHRSAVLAELREDLKAGRPCRLVATSLIEAGVDVDFPTVLR
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHH
AEAGLDSIAQAAGRCNREGLRPVEVSQVQVFAPANPDWAPPKELDLFAEVFRGIERTHRN
HHCCHHHHHHHHHCCCCCCCCCEEECEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHH
DLLAMAAVADYFAALYRRLGDGRLDREDVLGLLRDADIKGLPLDTLARKFKMIQTTLRPL
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH
IVPYAPYAEGCDKEVPEVADILRQLEHAEHVGVAGAARRLQPWLVQVPEQAYRALWQANA
HCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHCHHHHHCHHHHHHHHHHHCC
IAPVAQARYGEQFVRLVNPRLYDPRFGLRWDDSPQFLAAEALVQ
CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA