| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
Click here to switch to the map view.
The map label for this gene is 21244337
Identifier: 21244337
GI number: 21244337
Start: 4284921
End: 4286036
Strand: Reverse
Name: 21244337
Synonym: XAC3612
Alternate gene names: NA
Gene position: 4286036-4284921 (Counterclockwise)
Preceding gene: 21244338
Following gene: 21244336
Centisome position: 82.81
GC content: 65.41
Gene sequence:
>1116_bases GTGCGATGGTGGCCTGCCTGCCATCGCTTTGAACGACTAATCGCGCTTCGCCTCGAACCCTTTCTTCAAGGACTCACAAT GACTTCTTCGCAGCATGCCTGGCTGATCGCCATGGCCCTGGCCGCACCTTCTGTAGCCGCGCAATCGGCCGCACAACCTG CAGCTCACGCGGGCGCGCTGCCCGGTTACGACGCCGCGGCCGCCCAGGCGCAACGCGCGCTGGAGGCACGCTTCGACGAC GGGCTGAAGGACGCCGATTATCGTGGCTGGTTGAAGCAATGGTCGTCGGCGCCCAATCAGGTCGGCGCACCGCACAACCT GGTAAACGCCCGCGATCTGCAAACGCGCCTGCGCGACTACGGCTGGGATGCGCGGATCGAAACCTTCGAGGTGCTGTGGC CGTCGCCCAGGAGCTCGCAGCTGGAATTGCTTGGCCCCAAGCCCTATATCGCGCGCTTGAAAGAGCCGCCGCTGGCAGGC GACAACACCTCCACGCAGACCGAACACGTGCTGCCGCCGTACGTGATCTATGGCGGCAACGGCGATGTCACCGGCGACCT GGTCTACGTCAACTACGGCATTGCCGAAGACTACGAAGCGCTGGCGCGCAACGGCGTGGATGTGCGCGGCAAGATCGTCA TTGCGCGCTACGGCAAGGGTTGGCGCGGGCTCAAGCCGCGGCTGGCGCAGGAGCATGGCGCGATCGGAGCGATCATCTAT TCCGATCCGCGCGACGACGGCTATTTTCAGGATCAGGCCTATCCCGATGGACCGGCGCAATCAGTGGAGCGTGCAACGCG GCTCGGTTGCCAACTTCGCCATCTACCCAGGCGATCCGCTGACGCCGGGCGTGGGCGCAAGCAAGGGCGCCAAGCGCCTG AAGATCGAACAGGCCGGCAGCGTGTTGAAGATCCCGACCCTGCCGATCAGCTGGGGCGACGCACAGCCGCTGCTGGCCGC GTTGGGCGGCCCGGTAGCACCGGAAGACTGGCGCGGCGCCTTGCCGATCACCTACCGCATCGGCGGCGATGCAAAGGCAC GCGTGCATCTGAAGGTGGATGCCGACTGGGGCAGCCAGACCATCTACAACGTCATCGCCACCTTGCGCGGCAGTGA
Upstream 100 bases:
>100_bases CTGATTCGCGCACGCAGCGCCGATGCGCGTGGTGGAGAGTTGCCACTAACACCGCCATCGCGCCACCGCCCGCTGCACCG TCAGGTTCGCGACCTCGTTC
Downstream 100 bases:
>100_bases ATATCCAGACCAATGGGTGGTGCGCGGCAATCACCGCGACGGCTGGGTATTCGGTGCGGCCGACCCGCTATCGGGCACCA CCGCGCTGCTGGCCGAAGCC
Product: peptidase
Products: NA
Alternate protein names: Folate Hydrolase-Like Protein; Peptidase; Peptidase Family M; Aminopeptidase
Number of amino acids: Translated: 371; Mature: 371
Protein sequence:
>371_residues MRWWPACHRFERLIALRLEPFLQGLTMTSSQHAWLIAMALAAPSVAAQSAAQPAAHAGALPGYDAAAAQAQRALEARFDD GLKDADYRGWLKQWSSAPNQVGAPHNLVNARDLQTRLRDYGWDARIETFEVLWPSPRSSQLELLGPKPYIARLKEPPLAG DNTSTQTEHVLPPYVIYGGNGDVTGDLVYVNYGIAEDYEALARNGVDVRGKIVIARYGKGWRGLKPRLAQEHGAIGAIIY SDPRDDGYFQDQAYPDGPAQSVERATRLGCQLRHLPRRSADAGRGRKQGRQAPEDRTGRQRVEDPDPADQLGRRTAAAGR VGRPGSTGRLARRLADHLPHRRRCKGTRASEGGCRLGQPDHLQRHRHLARQ
Sequences:
>Translated_371_residues MRWWPACHRFERLIALRLEPFLQGLTMTSSQHAWLIAMALAAPSVAAQSAAQPAAHAGALPGYDAAAAQAQRALEARFDD GLKDADYRGWLKQWSSAPNQVGAPHNLVNARDLQTRLRDYGWDARIETFEVLWPSPRSSQLELLGPKPYIARLKEPPLAG DNTSTQTEHVLPPYVIYGGNGDVTGDLVYVNYGIAEDYEALARNGVDVRGKIVIARYGKGWRGLKPRLAQEHGAIGAIIY SDPRDDGYFQDQAYPDGPAQSVERATRLGCQLRHLPRRSADAGRGRKQGRQAPEDRTGRQRVEDPDPADQLGRRTAAAGR VGRPGSTGRLARRLADHLPHRRRCKGTRASEGGCRLGQPDHLQRHRHLARQ >Mature_371_residues MRWWPACHRFERLIALRLEPFLQGLTMTSSQHAWLIAMALAAPSVAAQSAAQPAAHAGALPGYDAAAAQAQRALEARFDD GLKDADYRGWLKQWSSAPNQVGAPHNLVNARDLQTRLRDYGWDARIETFEVLWPSPRSSQLELLGPKPYIARLKEPPLAG DNTSTQTEHVLPPYVIYGGNGDVTGDLVYVNYGIAEDYEALARNGVDVRGKIVIARYGKGWRGLKPRLAQEHGAIGAIIY SDPRDDGYFQDQAYPDGPAQSVERATRLGCQLRHLPRRSADAGRGRKQGRQAPEDRTGRQRVEDPDPADQLGRRTAAAGR VGRPGSTGRLARRLADHLPHRRRCKGTRASEGGCRLGQPDHLQRHRHLARQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI4885505, Length=203, Percent_Identity=33.9901477832512, Blast_Score=104, Evalue=1e-22, Organism=Homo sapiens, GI301500666, Length=208, Percent_Identity=34.6153846153846, Blast_Score=102, Evalue=6e-22, Organism=Homo sapiens, GI301500668, Length=208, Percent_Identity=34.6153846153846, Blast_Score=102, Evalue=7e-22, Organism=Homo sapiens, GI4758398, Length=208, Percent_Identity=34.6153846153846, Blast_Score=102, Evalue=7e-22, Organism=Homo sapiens, GI62548858, Length=208, Percent_Identity=34.6153846153846, Blast_Score=102, Evalue=8e-22, Organism=Homo sapiens, GI57232740, Length=191, Percent_Identity=31.413612565445, Blast_Score=69, Evalue=6e-12, Organism=Caenorhabditis elegans, GI25147314, Length=202, Percent_Identity=30.1980198019802, Blast_Score=89, Evalue=4e-18, Organism=Caenorhabditis elegans, GI71995331, Length=202, Percent_Identity=30.1980198019802, Blast_Score=89, Evalue=4e-18, Organism=Caenorhabditis elegans, GI71995324, Length=202, Percent_Identity=30.1980198019802, Blast_Score=88, Evalue=6e-18, Organism=Saccharomyces cerevisiae, GI6322586, Length=89, Percent_Identity=42.6966292134831, Blast_Score=74, Evalue=5e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41062; Mature: 41062
Theoretical pI: Translated: 10.19; Mature: 10.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRWWPACHRFERLIALRLEPFLQGLTMTSSQHAWLIAMALAAPSVAAQSAAQPAAHAGAL CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHCCCHHHHCCC PGYDAAAAQAQRALEARFDDGLKDADYRGWLKQWSSAPNQVGAPHNLVNARDLQTRLRDY CCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHC GWDARIETFEVLWPSPRSSQLELLGPKPYIARLKEPPLAGDNTSTQTEHVLPPYVIYGGN CCCCCEEEEEEECCCCCCCCEEEECCCHHHHHCCCCCCCCCCCCCCCCCCCCCEEEECCC GDVTGDLVYVNYGIAEDYEALARNGVDVRGKIVIARYGKGWRGLKPRLAQEHGAIGAIIY CCCEEEEEEEECCCHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCHHHHHCCCEEEEEE SDPRDDGYFQDQAYPDGPAQSVERATRLGCQLRHLPRRSADAGRGRKQGRQAPEDRTGRQ CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCCCCHH RVEDPDPADQLGRRTAAAGRVGRPGSTGRLARRLADHLPHRRRCKGTRASEGGCRLGQPD CCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCCH HLQRHRHLARQ HHHHHHHHHCC >Mature Secondary Structure MRWWPACHRFERLIALRLEPFLQGLTMTSSQHAWLIAMALAAPSVAAQSAAQPAAHAGAL CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHCCCHHHHCCC PGYDAAAAQAQRALEARFDDGLKDADYRGWLKQWSSAPNQVGAPHNLVNARDLQTRLRDY CCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHC GWDARIETFEVLWPSPRSSQLELLGPKPYIARLKEPPLAGDNTSTQTEHVLPPYVIYGGN CCCCCEEEEEEECCCCCCCCEEEECCCHHHHHCCCCCCCCCCCCCCCCCCCCCEEEECCC GDVTGDLVYVNYGIAEDYEALARNGVDVRGKIVIARYGKGWRGLKPRLAQEHGAIGAIIY CCCEEEEEEEECCCHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCHHHHHCCCEEEEEE SDPRDDGYFQDQAYPDGPAQSVERATRLGCQLRHLPRRSADAGRGRKQGRQAPEDRTGRQ CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCCCCHH RVEDPDPADQLGRRTAAAGRVGRPGSTGRLARRLADHLPHRRRCKGTRASEGGCRLGQPD CCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCCH HLQRHRHLARQ HHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA