| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21244336
Identifier: 21244336
GI number: 21244336
Start: 4283663
End: 4285507
Strand: Reverse
Name: 21244336
Synonym: XAC3611
Alternate gene names: NA
Gene position: 4285507-4283663 (Counterclockwise)
Preceding gene: 21244337
Following gene: 77748733
Centisome position: 82.8
GC content: 66.45
Gene sequence:
>1845_bases ATGGCGGCAACGGCGATGTCACCGGCGACCTGGTCTACGTCAACTACGGCATTGCCGAAGACTACGAAGCGCTGGCGCGC AACGGCGTGGATGTGCGCGGCAAGATCGTCATTGCGCGCTACGGCAAGGGTTGGCGCGGGCTCAAGCCGCGGCTGGCGCA GGAGCATGGCGCGATCGGAGCGATCATCTATTCCGATCCGCGCGACGACGGCTATTTTCAGGATCAGGCCTATCCCGATG GACCGGCGCAATCAGTGGAGCGTGCAACGCGGCTCGGTTGCCAACTTCGCCATCTACCCAGGCGATCCGCTGACGCCGGG CGTGGGCGCAAGCAAGGGCGCCAAGCGCCTGAAGATCGAACAGGCCGGCAGCGTGTTGAAGATCCCGACCCTGCCGATCA GCTGGGGCGACGCACAGCCGCTGCTGGCCGCGTTGGGCGGCCCGGTAGCACCGGAAGACTGGCGCGGCGCCTTGCCGATC ACCTACCGCATCGGCGGCGATGCAAAGGCACGCGTGCATCTGAAGGTGGATGCCGACTGGGGCAGCCAGACCATCTACAA CGTCATCGCCACCTTGCGCGGCAGTGAATATCCAGACCAATGGGTGGTGCGCGGCAATCACCGCGACGGCTGGGTATTCG GTGCGGCCGACCCGCTATCGGGCACCACCGCGCTGCTGGCCGAAGCCAAGGCGATTGGCGAGCTGGCCAAACAGGGCCAG CGTCCCAAGCGCACGCTGGTGTACGCCAGCTGGGATGGCGAAGAGGCCGGCCTGCTCGGCTCCACCGAGTGGGCCGAGCA ACACGCCGACGAGCTGCGACGCAAAGCGGTGCTGTACGTCAACACCGACGGCAATGGACGCGGCTTTCTCAACGCCGGTG GCAGTCACGCGTTGCAACGCCTGGTCAACAGCGTGGCGGCCGACGTGCAGGACCCGGACAGCGGCGTGAGCGTGCTCGAA CGTCAGCGCGCGCGTGCGCGCATCGACGCACTGGCACCCGCCGCCAAGCCGGCGCAGAAGGACATCGCAAAAACCGCTGC GGGCGGCGGCGACATTCCGCTCAAGGCGCTCGGTTCGGGCAGCGACTACAGCCCCTTCCTGCAGCATCTGGGCCTGGCCA CGCTGGATCTGGGCTATGGCGGGCAGGGCGGAGGCAGTGGTGTCTATCACTCGCTGTACGACTCCTACGATTATTTCGCA CGCTTCATCGATCCGCAGTTCGCCTATCTGCCGCTGTTGTCGCAAACCGTGGGCCGTACGGTCCTGCGCGTCGCCAACGC ACCGGTGTTGCCGCAGCGTTTCGGCGACTTCGCCGATGCGGTGGCCGGTTATGCGCAGGAGCTCAAACAACAGGCAGACA GCGACCGCACTGCGGCGCGCACGCAGGCCGAGTTGCTGCAGGCCGGCGCCTACGCGGCGGTGGATAACCCGAACCGGCCG CAGCGTGCGCCCGAGCCGAAAGCGGCGGTGCCGCAGATCGATTTCGCTGCACTGGATCAGGCGATCACGCGCCTGCAGGA CAGTGCCAAGCGTTACGACATGGCATTGGCCGCACGCGGAGGCAATCTGGATGCGCACGTACGCAGCAAGCTCAACGCCT CGCTGCAGCGCATCGATCAAACCCTGCTGGCCGAGGCTGGTCTGCCCGGCCGGCCGTGGTACCGCAACCTGATCTACGCC CCCGGTCTGGCCACCGGTTACGAGGTCAAGACCTTGCCCGGTATCCGCGAAGCGCTGGAAGACCGCCGATGGGAGGACCT GAGCCGGTACATCGTGCAGACCGCCGCAGTGCTGGACCGCTACCGCGAGGCGATCGATCGCAATACTGCGCTGATCGAAG GCTAA
Upstream 100 bases:
>100_bases CTTGGCCCCAAGCCCTATATCGCGCGCTTGAAAGAGCCGCCGCTGGCAGGCGACAACACCTCCACGCAGACCGAACACGT GCTGCCGCCGTACGTGATCT
Downstream 100 bases:
>100_bases CTTGGCGCTGCTGCACAGCACGACTGGCAGCACTGCATGGCAGCGATGACGCCACGGCCGCCAGGCGTGGACGATGCGTG TTGCACGCGGCCCGGTTCGC
Product: peptidase
Products: NA
Alternate protein names: Folate Hydrolase-Like Protein; Peptidase; Peptidase Family M; Aminopeptidase
Number of amino acids: Translated: 614; Mature: 613
Protein sequence:
>614_residues MAATAMSPATWSTSTTALPKTTKRWRATAWMCAARSSLRATARVGAGSSRGWRRSMARSERSSIPIRATTAIFRIRPIPM DRRNQWSVQRGSVANFAIYPGDPLTPGVGASKGAKRLKIEQAGSVLKIPTLPISWGDAQPLLAALGGPVAPEDWRGALPI TYRIGGDAKARVHLKVDADWGSQTIYNVIATLRGSEYPDQWVVRGNHRDGWVFGAADPLSGTTALLAEAKAIGELAKQGQ RPKRTLVYASWDGEEAGLLGSTEWAEQHADELRRKAVLYVNTDGNGRGFLNAGGSHALQRLVNSVAADVQDPDSGVSVLE RQRARARIDALAPAAKPAQKDIAKTAAGGGDIPLKALGSGSDYSPFLQHLGLATLDLGYGGQGGGSGVYHSLYDSYDYFA RFIDPQFAYLPLLSQTVGRTVLRVANAPVLPQRFGDFADAVAGYAQELKQQADSDRTAARTQAELLQAGAYAAVDNPNRP QRAPEPKAAVPQIDFAALDQAITRLQDSAKRYDMALAARGGNLDAHVRSKLNASLQRIDQTLLAEAGLPGRPWYRNLIYA PGLATGYEVKTLPGIREALEDRRWEDLSRYIVQTAAVLDRYREAIDRNTALIEG
Sequences:
>Translated_614_residues MAATAMSPATWSTSTTALPKTTKRWRATAWMCAARSSLRATARVGAGSSRGWRRSMARSERSSIPIRATTAIFRIRPIPM DRRNQWSVQRGSVANFAIYPGDPLTPGVGASKGAKRLKIEQAGSVLKIPTLPISWGDAQPLLAALGGPVAPEDWRGALPI TYRIGGDAKARVHLKVDADWGSQTIYNVIATLRGSEYPDQWVVRGNHRDGWVFGAADPLSGTTALLAEAKAIGELAKQGQ RPKRTLVYASWDGEEAGLLGSTEWAEQHADELRRKAVLYVNTDGNGRGFLNAGGSHALQRLVNSVAADVQDPDSGVSVLE RQRARARIDALAPAAKPAQKDIAKTAAGGGDIPLKALGSGSDYSPFLQHLGLATLDLGYGGQGGGSGVYHSLYDSYDYFA RFIDPQFAYLPLLSQTVGRTVLRVANAPVLPQRFGDFADAVAGYAQELKQQADSDRTAARTQAELLQAGAYAAVDNPNRP QRAPEPKAAVPQIDFAALDQAITRLQDSAKRYDMALAARGGNLDAHVRSKLNASLQRIDQTLLAEAGLPGRPWYRNLIYA PGLATGYEVKTLPGIREALEDRRWEDLSRYIVQTAAVLDRYREAIDRNTALIEG >Mature_613_residues AATAMSPATWSTSTTALPKTTKRWRATAWMCAARSSLRATARVGAGSSRGWRRSMARSERSSIPIRATTAIFRIRPIPMD RRNQWSVQRGSVANFAIYPGDPLTPGVGASKGAKRLKIEQAGSVLKIPTLPISWGDAQPLLAALGGPVAPEDWRGALPIT YRIGGDAKARVHLKVDADWGSQTIYNVIATLRGSEYPDQWVVRGNHRDGWVFGAADPLSGTTALLAEAKAIGELAKQGQR PKRTLVYASWDGEEAGLLGSTEWAEQHADELRRKAVLYVNTDGNGRGFLNAGGSHALQRLVNSVAADVQDPDSGVSVLER QRARARIDALAPAAKPAQKDIAKTAAGGGDIPLKALGSGSDYSPFLQHLGLATLDLGYGGQGGGSGVYHSLYDSYDYFAR FIDPQFAYLPLLSQTVGRTVLRVANAPVLPQRFGDFADAVAGYAQELKQQADSDRTAARTQAELLQAGAYAAVDNPNRPQ RAPEPKAAVPQIDFAALDQAITRLQDSAKRYDMALAARGGNLDAHVRSKLNASLQRIDQTLLAEAGLPGRPWYRNLIYAP GLATGYEVKTLPGIREALEDRRWEDLSRYIVQTAAVLDRYREAIDRNTALIEG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI4885505, Length=526, Percent_Identity=30.6083650190114, Blast_Score=249, Evalue=4e-66, Organism=Homo sapiens, GI4758398, Length=508, Percent_Identity=32.2834645669291, Blast_Score=249, Evalue=7e-66, Organism=Homo sapiens, GI301500668, Length=508, Percent_Identity=32.2834645669291, Blast_Score=248, Evalue=1e-65, Organism=Homo sapiens, GI62548858, Length=507, Percent_Identity=30.3747534516765, Blast_Score=223, Evalue=3e-58, Organism=Homo sapiens, GI301500666, Length=532, Percent_Identity=29.6992481203008, Blast_Score=223, Evalue=4e-58, Organism=Homo sapiens, GI57232740, Length=513, Percent_Identity=30.7992202729045, Blast_Score=221, Evalue=2e-57, Organism=Homo sapiens, GI24308545, Length=469, Percent_Identity=30.4904051172708, Blast_Score=212, Evalue=9e-55, Organism=Homo sapiens, GI301500670, Length=451, Percent_Identity=30.5986696230599, Blast_Score=212, Evalue=9e-55, Organism=Homo sapiens, GI33589848, Length=368, Percent_Identity=28.804347826087, Blast_Score=130, Evalue=3e-30, Organism=Homo sapiens, GI189458819, Length=234, Percent_Identity=29.0598290598291, Blast_Score=97, Evalue=6e-20, Organism=Homo sapiens, GI189458817, Length=234, Percent_Identity=29.0598290598291, Blast_Score=97, Evalue=6e-20, Organism=Homo sapiens, GI126157508, Length=476, Percent_Identity=23.9495798319328, Blast_Score=85, Evalue=2e-16, Organism=Caenorhabditis elegans, GI71984813, Length=495, Percent_Identity=25.8585858585859, Blast_Score=158, Evalue=1e-38, Organism=Caenorhabditis elegans, GI25147314, Length=411, Percent_Identity=29.9270072992701, Blast_Score=153, Evalue=3e-37, Organism=Caenorhabditis elegans, GI71995331, Length=411, Percent_Identity=29.9270072992701, Blast_Score=153, Evalue=3e-37, Organism=Caenorhabditis elegans, GI71995324, Length=336, Percent_Identity=31.547619047619, Blast_Score=149, Evalue=3e-36, Organism=Caenorhabditis elegans, GI71984807, Length=357, Percent_Identity=27.1708683473389, Blast_Score=123, Evalue=3e-28, Organism=Saccharomyces cerevisiae, GI6322586, Length=527, Percent_Identity=25.0474383301708, Blast_Score=129, Evalue=1e-30,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 66256; Mature: 66125
Theoretical pI: Translated: 10.04; Mature: 10.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAATAMSPATWSTSTTALPKTTKRWRATAWMCAARSSLRATARVGAGSSRGWRRSMARSE CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH RSSIPIRATTAIFRIRPIPMDRRNQWSVQRGSVANFAIYPGDPLTPGVGASKGAKRLKIE HCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCEEEHH QAGSVLKIPTLPISWGDAQPLLAALGGPVAPEDWRGALPITYRIGGDAKARVHLKVDADW HCCCEEECCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCEEEEECCCCEEEEEEEEECCC GSQTIYNVIATLRGSEYPDQWVVRGNHRDGWVFGAADPLSGTTALLAEAKAIGELAKQGQ CHHHHHHHHHHHCCCCCCCCCEEECCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHCCC RPKRTLVYASWDGEEAGLLGSTEWAEQHADELRRKAVLYVNTDGNGRGFLNAGGSHALQR CCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCEEEEEEECCCCCEEEECCHHHHHHH LVNSVAADVQDPDSGVSVLERQRARARIDALAPAAKPAQKDIAKTAAGGGDIPLKALGSG HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCEECCCC SDYSPFLQHLGLATLDLGYGGQGGGSGVYHSLYDSYDYFARFIDPQFAYLPLLSQTVGRT CCCHHHHHHCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH VLRVANAPVLPQRFGDFADAVAGYAQELKQQADSDRTAARTQAELLQAGAYAAVDNPNRP HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCEEECCCCCCC QRAPEPKAAVPQIDFAALDQAITRLQDSAKRYDMALAARGGNLDAHVRSKLNASLQRIDQ CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHH TLLAEAGLPGRPWYRNLIYAPGLATGYEVKTLPGIREALEDRRWEDLSRYIVQTAAVLDR HHHHHCCCCCCCHHHHCEECCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHH YREAIDRNTALIEG HHHHHCCCCEECCC >Mature Secondary Structure AATAMSPATWSTSTTALPKTTKRWRATAWMCAARSSLRATARVGAGSSRGWRRSMARSE CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH RSSIPIRATTAIFRIRPIPMDRRNQWSVQRGSVANFAIYPGDPLTPGVGASKGAKRLKIE HCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCEEEHH QAGSVLKIPTLPISWGDAQPLLAALGGPVAPEDWRGALPITYRIGGDAKARVHLKVDADW HCCCEEECCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCEEEEECCCCEEEEEEEEECCC GSQTIYNVIATLRGSEYPDQWVVRGNHRDGWVFGAADPLSGTTALLAEAKAIGELAKQGQ CHHHHHHHHHHHCCCCCCCCCEEECCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHCCC RPKRTLVYASWDGEEAGLLGSTEWAEQHADELRRKAVLYVNTDGNGRGFLNAGGSHALQR CCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCEEEEEEECCCCCEEEECCHHHHHHH LVNSVAADVQDPDSGVSVLERQRARARIDALAPAAKPAQKDIAKTAAGGGDIPLKALGSG HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCEECCCC SDYSPFLQHLGLATLDLGYGGQGGGSGVYHSLYDSYDYFARFIDPQFAYLPLLSQTVGRT CCCHHHHHHCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH VLRVANAPVLPQRFGDFADAVAGYAQELKQQADSDRTAARTQAELLQAGAYAAVDNPNRP HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCEEECCCCCCC QRAPEPKAAVPQIDFAALDQAITRLQDSAKRYDMALAARGGNLDAHVRSKLNASLQRIDQ CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHH TLLAEAGLPGRPWYRNLIYAPGLATGYEVKTLPGIREALEDRRWEDLSRYIVQTAAVLDR HHHHHCCCCCCCHHHHCEECCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHH YREAIDRNTALIEG HHHHHCCCCEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA