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The map label for this gene is stpA [C]

Identifier: 21244293

GI number: 21244293

Start: 4232423

End: 4232884

Strand: Direct

Name: stpA [C]

Synonym: XAC3568

Alternate gene names: 21244293

Gene position: 4232423-4232884 (Clockwise)

Preceding gene: 77748729

Following gene: 21244295

Centisome position: 81.78

GC content: 64.5

Gene sequence:

>462_bases
ATGTCGATCGATCTTAGTGGCCTGTCGGCCAAGCAGTTGAGCGCCCTGATCAAAAATGCAAAGAAGCAGCAGACCGTGGT
TGCCAAGCGCGCGCCGATCGCCAAGGTCCGCACGCAGCTGGTCCGCGCTGCAAAAGCCCAGGGTTATTCCATCGAAGAAT
TGTTTGGTGCTTCTGCCAGTGCCGGCCCGGGCCGTCCGGCGGGTGCCGGCAAGCCGGGTCCGCGTGCCGGCCGCAAGCTG
GGCAAGGTGCCGCCGAAGTATCGCAACCCCGGCAACGCCCAGGAAACCTGGACCGGCCGTGGCAAGCAGCCGCGCTGGCT
GGCCGAGTTGACCGCCGCCGGCAAGAAGGTAGAAGACTTCCTGATCAGCAAGGTCGGCGGCGCGAAAAAAGCAACCGCAA
AGAAGGCCTCGCCGCGCAAAGCCGTGACCAAGCGCGCCGCCAAGAAGTCCAAGGCCGCTTGA

Upstream 100 bases:

>100_bases
CGAATTATTTCGGCGCATTTGTCATACCGGTTTTCTCACTTTATGATGGCCACCGCTGCCATGGACCGGCATTCTTTTTC
TCTCATCTTCCGGAGCAGTG

Downstream 100 bases:

>100_bases
TTCAAACCAATAAGAGCGCCGGCCATGCCGGCGTTTTTATTGCAGGGTGTTTCCCCTTATAAATTCTTGCGGGCAGGAAT
GAGCAGATTGCCAAACAGCA

Product: DNA-binding protein

Products: NA

Alternate protein names: H-NS Histone Family Trans-Acting Regulatory Protein

Number of amino acids: Translated: 153; Mature: 152

Protein sequence:

>153_residues
MSIDLSGLSAKQLSALIKNAKKQQTVVAKRAPIAKVRTQLVRAAKAQGYSIEELFGASASAGPGRPAGAGKPGPRAGRKL
GKVPPKYRNPGNAQETWTGRGKQPRWLAELTAAGKKVEDFLISKVGGAKKATAKKASPRKAVTKRAAKKSKAA

Sequences:

>Translated_153_residues
MSIDLSGLSAKQLSALIKNAKKQQTVVAKRAPIAKVRTQLVRAAKAQGYSIEELFGASASAGPGRPAGAGKPGPRAGRKL
GKVPPKYRNPGNAQETWTGRGKQPRWLAELTAAGKKVEDFLISKVGGAKKATAKKASPRKAVTKRAAKKSKAA
>Mature_152_residues
SIDLSGLSAKQLSALIKNAKKQQTVVAKRAPIAKVRTQLVRAAKAQGYSIEELFGASASAGPGRPAGAGKPGPRAGRKLG
KVPPKYRNPGNAQETWTGRGKQPRWLAELTAAGKKVEDFLISKVGGAKKATAKKASPRKAVTKRAAKKSKAA

Specific function: It May Act In A Fashion Similar To H-Ns Proteins. [C]

COG id: COG2916

COG function: function code R; DNA-binding protein H-NS

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15995; Mature: 15864

Theoretical pI: Translated: 11.98; Mature: 11.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
0.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIDLSGLSAKQLSALIKNAKKQQTVVAKRAPIAKVRTQLVRAAKAQGYSIEELFGASAS
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHCCCCC
AGPGRPAGAGKPGPRAGRKLGKVPPKYRNPGNAQETWTGRGKQPRWLAELTAAGKKVEDF
CCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCHHHHHH
LISKVGGAKKATAKKASPRKAVTKRAAKKSKAA
HHHHHCCCHHHHHHCCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SIDLSGLSAKQLSALIKNAKKQQTVVAKRAPIAKVRTQLVRAAKAQGYSIEELFGASAS
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHCCCCC
AGPGRPAGAGKPGPRAGRKLGKVPPKYRNPGNAQETWTGRGKQPRWLAELTAAGKKVEDF
CCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCHHHHHH
LISKVGGAKKATAKKASPRKAVTKRAAKKSKAA
HHHHHCCCHHHHHHCCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA