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The map label for this gene is yrbE [C]

Identifier: 21244295

GI number: 21244295

Start: 4234369

End: 4235481

Strand: Direct

Name: yrbE [C]

Synonym: XAC3570

Alternate gene names: 21244295

Gene position: 4234369-4235481 (Clockwise)

Preceding gene: 21244293

Following gene: 21244296

Centisome position: 81.81

GC content: 64.6

Gene sequence:

>1113_bases
ATGATCAAACCGCAACCTCCACGCATCGAACAAGACTCGCAGGATCAGGCACAGGTCCGCCTCGCTGGCAGTTGGGTCCT
GGCGACCGCCCTGCCCCAGGCAGAACTGCTGCAGGCCGTGCCCGACGGGGTGCGCCGCATCGACGCGCGCGGCATCCAGC
AGCTGGATTCGGCCGGCGTACTGCAGCTGCTGCGCTTTGCCGGCCGCATGGGCCTGAAGGAAGACGCGATCGATTTTCGC
GATGAGCACCAGGCACTGGTGTGCACCATCGAGGAACTCAACGACGAGCGCCCCAAGCCCAAACGCGATTACGGCTTCGT
CGCCGCGCTCGACCGCCTGGGCCGGGCCACCCACCGCGTCGGCCAGGACATCCTGGAGTTGAACAGTTTTCTGGGCGAAA
ACCTGGTCAAGATCATGCGGCTGATCCACGAGCCGCGGCGCTTCCGGCTGACCTCCACCGTGCATCACATGGAGCAGGTG
GGCCTGGACGCGGTGCCGCTGGTGGTGCTGCTGTCGTATCTGGTGGGCGCGGTGATCGCCTTCCTGGGCTCGACCATCCT
GCGCGACTTCGGTGCGGAAATTTATGTGGTGGAGTTGGTGTCCATCGCCTTCCTGCGCGAATTCGCGGTGCTGCTGACGG
CAATTGTTCTGGCAGGCCGCACCGCCAGCGCCTTCACCGCGCAGATCGGTGCGATGAAATCGCGCGAGGAAGTGGACGCG
ATCCGTACGCTGGGCCTGGACCCGATCGACCTGCTGGTGATCCCGCGCCTGCTCGCGCTGATCTTCACCCTGCCGCTGCT
GACCTTCATCGCGATGATCGCCGGCCTGGCCGGTGGCGTCACCGTGGGCGCGTTCGACCTGGATATTCCGCCGCAGATGT
ATCTGGCGCGCATGCACGACACCATCCAGTTGCGGCATTTCCTGGTCGGGCTCTCGAAGGCGCCGCTGTTTGCGCTGGTG
ATCGGCCTGATCGGCTGCCTGGAAGGGCTGAAGGTCAGCGGAACCGCGCAATCGGTGGGCGAACGCACCACCTCCTCGGT
GGTGCAGACGATTTCCTTGGTCATCATTCTCGACGCGATTGCGGCGTTGTGGTTCATGAAGATGGGGTGGTGA

Upstream 100 bases:

>100_bases
GCCGGCGCCCTCATCGACGGCCGTCGGCACGCCGCTGCGGTTGCGTCCCCATCCGTCGCTCACATTGGCCCTGTATGCTG
GCGCCACGGACAGGCCACCC

Downstream 100 bases:

>100_bases
TGGAGCCGGGATTCGACATTCGGGATTCGGGATTTGCACAAAGCCGCAGCGCGGCGCTTGCATTGGTATCGGAGAGGAAG
GTGCCGTGACCAATCCCGAA

Product: ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 370; Mature: 370

Protein sequence:

>370_residues
MIKPQPPRIEQDSQDQAQVRLAGSWVLATALPQAELLQAVPDGVRRIDARGIQQLDSAGVLQLLRFAGRMGLKEDAIDFR
DEHQALVCTIEELNDERPKPKRDYGFVAALDRLGRATHRVGQDILELNSFLGENLVKIMRLIHEPRRFRLTSTVHHMEQV
GLDAVPLVVLLSYLVGAVIAFLGSTILRDFGAEIYVVELVSIAFLREFAVLLTAIVLAGRTASAFTAQIGAMKSREEVDA
IRTLGLDPIDLLVIPRLLALIFTLPLLTFIAMIAGLAGGVTVGAFDLDIPPQMYLARMHDTIQLRHFLVGLSKAPLFALV
IGLIGCLEGLKVSGTAQSVGERTTSSVVQTISLVIILDAIAALWFMKMGW

Sequences:

>Translated_370_residues
MIKPQPPRIEQDSQDQAQVRLAGSWVLATALPQAELLQAVPDGVRRIDARGIQQLDSAGVLQLLRFAGRMGLKEDAIDFR
DEHQALVCTIEELNDERPKPKRDYGFVAALDRLGRATHRVGQDILELNSFLGENLVKIMRLIHEPRRFRLTSTVHHMEQV
GLDAVPLVVLLSYLVGAVIAFLGSTILRDFGAEIYVVELVSIAFLREFAVLLTAIVLAGRTASAFTAQIGAMKSREEVDA
IRTLGLDPIDLLVIPRLLALIFTLPLLTFIAMIAGLAGGVTVGAFDLDIPPQMYLARMHDTIQLRHFLVGLSKAPLFALV
IGLIGCLEGLKVSGTAQSVGERTTSSVVQTISLVIILDAIAALWFMKMGW
>Mature_370_residues
MIKPQPPRIEQDSQDQAQVRLAGSWVLATALPQAELLQAVPDGVRRIDARGIQQLDSAGVLQLLRFAGRMGLKEDAIDFR
DEHQALVCTIEELNDERPKPKRDYGFVAALDRLGRATHRVGQDILELNSFLGENLVKIMRLIHEPRRFRLTSTVHHMEQV
GLDAVPLVVLLSYLVGAVIAFLGSTILRDFGAEIYVVELVSIAFLREFAVLLTAIVLAGRTASAFTAQIGAMKSREEVDA
IRTLGLDPIDLLVIPRLLALIFTLPLLTFIAMIAGLAGGVTVGAFDLDIPPQMYLARMHDTIQLRHFLVGLSKAPLFALV
IGLIGCLEGLKVSGTAQSVGERTTSSVVQTISLVIILDAIAALWFMKMGW

Specific function: Could be part of an ABC transporter complex [H]

COG id: COG0767

COG function: function code Q; ABC-type transport system involved in resistance to organic solvents, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mlaE permease family [H]

Homologues:

Organism=Escherichia coli, GI1789585, Length=206, Percent_Identity=30.0970873786408, Blast_Score=97, Evalue=2e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003453 [H]

Pfam domain/function: PF02405 DUF140 [H]

EC number: NA

Molecular weight: Translated: 40497; Mature: 40497

Theoretical pI: Translated: 6.41; Mature: 6.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKPQPPRIEQDSQDQAQVRLAGSWVLATALPQAELLQAVPDGVRRIDARGIQQLDSAGV
CCCCCCCCCCCCCCHHHHHHHHHCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LQLLRFAGRMGLKEDAIDFRDEHQALVCTIEELNDERPKPKRDYGFVAALDRLGRATHRV
HHHHHHHHCCCCCHHHCCHHCCCHHHEEEHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHH
GQDILELNSFLGENLVKIMRLIHEPRRFRLTSTVHHMEQVGLDAVPLVVLLSYLVGAVIA
HHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
FLGSTILRDFGAEIYVVELVSIAFLREFAVLLTAIVLAGRTASAFTAQIGAMKSREEVDA
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHH
IRTLGLDPIDLLVIPRLLALIFTLPLLTFIAMIAGLAGGVTVGAFDLDIPPQMYLARMHD
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHH
TIQLRHFLVGLSKAPLFALVIGLIGCLEGLKVSGTAQSVGERTTSSVVQTISLVIILDAI
HHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
AALWFMKMGW
HHHHHHHCCC
>Mature Secondary Structure
MIKPQPPRIEQDSQDQAQVRLAGSWVLATALPQAELLQAVPDGVRRIDARGIQQLDSAGV
CCCCCCCCCCCCCCHHHHHHHHHCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LQLLRFAGRMGLKEDAIDFRDEHQALVCTIEELNDERPKPKRDYGFVAALDRLGRATHRV
HHHHHHHHCCCCCHHHCCHHCCCHHHEEEHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHH
GQDILELNSFLGENLVKIMRLIHEPRRFRLTSTVHHMEQVGLDAVPLVVLLSYLVGAVIA
HHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
FLGSTILRDFGAEIYVVELVSIAFLREFAVLLTAIVLAGRTASAFTAQIGAMKSREEVDA
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHH
IRTLGLDPIDLLVIPRLLALIFTLPLLTFIAMIAGLAGGVTVGAFDLDIPPQMYLARMHD
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHH
TIQLRHFLVGLSKAPLFALVIGLIGCLEGLKVSGTAQSVGERTTSSVVQTISLVIILDAI
HHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
AALWFMKMGW
HHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA