| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21244277
Identifier: 21244277
GI number: 21244277
Start: 4211971
End: 4212438
Strand: Direct
Name: 21244277
Synonym: XAC3552
Alternate gene names: NA
Gene position: 4211971-4212438 (Clockwise)
Preceding gene: 21244257
Following gene: 21244281
Centisome position: 81.38
GC content: 66.88
Gene sequence:
>468_bases ATGACCTCAATTCCTTCGCCTCGCGTTGCACGCGCGCCTGCCCTGGTGGGCTGGCGGCTGCTGGCGTTGTGCTACGACGC CTGGCCGGTGCTGGCGCTGTCGATGCTGATCTCCACCGTCTTCACGCTGGGCTTTACGCTCGCCGGGCACCCCGCGCGCG AAAACATCGCGCCTTTCAGCGGCTGGCAATGGCTGTTGTGGCTGTGCTGCTGGATCGCCGCAGGCATCTACGCCACCGTG AGCTGGCGGCGCGGCGGGCAGACGCTGGGCATGCGCCCCTGGCGGCTGCGCTTGATCGACCCACAGGTGTCCTGGCGTGC GCTGTGGATCCGCTATGCCGTCGGCAGCTTGTCGCTGGCGCTGGGCGGACTGGGATTCTGGTGGGCGTGGCTGGATCGCG ACCGGCTAACCTGGCATGACCGTGCGAGTAAGACGCGGCTGGAGCGTATTGCCAGGAAATTGCAGTAA
Upstream 100 bases:
>100_bases CGCAGTTCGATGTATCGCGTGCGTCAGCGCGTGCAGGCACCAGAGCGCGGCTACTGCAGCGCGGCGTTGCGCAGTGCTGG GCGACCGTTATGCTCGCGCC
Downstream 100 bases:
>100_bases TCGGGCCGGCAGTCCACAACTTTCCTATCGAAGCTCCCGCATCTTCGATGCATGCGACTGCACCTGGAATGCTCTAGGGC TAGCGGCAGCGACCAAACCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 155; Mature: 154
Protein sequence:
>155_residues MTSIPSPRVARAPALVGWRLLALCYDAWPVLALSMLISTVFTLGFTLAGHPARENIAPFSGWQWLLWLCCWIAAGIYATV SWRRGGQTLGMRPWRLRLIDPQVSWRALWIRYAVGSLSLALGGLGFWWAWLDRDRLTWHDRASKTRLERIARKLQ
Sequences:
>Translated_155_residues MTSIPSPRVARAPALVGWRLLALCYDAWPVLALSMLISTVFTLGFTLAGHPARENIAPFSGWQWLLWLCCWIAAGIYATV SWRRGGQTLGMRPWRLRLIDPQVSWRALWIRYAVGSLSLALGGLGFWWAWLDRDRLTWHDRASKTRLERIARKLQ >Mature_154_residues TSIPSPRVARAPALVGWRLLALCYDAWPVLALSMLISTVFTLGFTLAGHPARENIAPFSGWQWLLWLCCWIAAGIYATVS WRRGGQTLGMRPWRLRLIDPQVSWRALWIRYAVGSLSLALGGLGFWWAWLDRDRLTWHDRASKTRLERIARKLQ
Specific function: Unknown
COG id: COG1714
COG function: function code S; Predicted membrane protein/domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17788; Mature: 17657
Theoretical pI: Translated: 11.87; Mature: 11.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSIPSPRVARAPALVGWRLLALCYDAWPVLALSMLISTVFTLGFTLAGHPARENIAPFS CCCCCCCCCHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC GWQWLLWLCCWIAAGIYATVSWRRGGQTLGMRPWRLRLIDPQVSWRALWIRYAVGSLSLA CHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHH LGGLGFWWAWLDRDRLTWHDRASKTRLERIARKLQ HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TSIPSPRVARAPALVGWRLLALCYDAWPVLALSMLISTVFTLGFTLAGHPARENIAPFS CCCCCCCCHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC GWQWLLWLCCWIAAGIYATVSWRRGGQTLGMRPWRLRLIDPQVSWRALWIRYAVGSLSLA CHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHH LGGLGFWWAWLDRDRLTWHDRASKTRLERIARKLQ HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA