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The map label for this gene is ychA [C]

Identifier: 21244138

GI number: 21244138

Start: 4018386

End: 4019267

Strand: Direct

Name: ychA [C]

Synonym: XAC3413

Alternate gene names: 21244138

Gene position: 4018386-4019267 (Clockwise)

Preceding gene: 21244137

Following gene: 21244140

Centisome position: 77.64

GC content: 66.44

Gene sequence:

>882_bases
TTGAACCCTGCGCCGCTTGCCGACACTCTTGGCAGCATGGTCGACATGCTCCCACTTCCCCATTGGACCGCGCTCGCCAG
CCTGGACGACGATGCGGTGCCGTTGATGTCCACCGCGCTGCTGATCGCGCGCGACGAGTATCCGCAGCTGGATGCCGGGC
TGTACGACACGCTGGTGCAGAGCCACGTCGAGCATCTGCGCCGGGAAGTGGAGGCAATCGATCTTTGGCCGCTGAAGATG
GCGGCGGTCAATCGCTACCTGTTCGACGAGCTGGGCTATTCGGGCAATCACGACGAGTATTACGACCCGCGCAACAGCTA
CCTCAACCAGGTGTTCGAGCGCCGGCTGGGCAATCCGATTTCGCTGGCGATGGTGCAGATCGAAGTGGCGCGCCGGCTGG
GCATCCCGTTGGCGGGAGTGTCGTTTCCCGGCCATTTCCTGGTGCGTCTGCCGGTGGATGACGGCGTGCTGGTGATGGAC
CCGTTCAATGGCGGCCGTCCGCTGGGCGTGGATGAGCTGCGCGAGCGTGCGCGCCCGCATCTGGGCGGCGAAATTCCCGA
CGACCGCGCGCTGGCGCAGATTCTCGACCCCGCCCCGCACCGCGCGATCTTGATCCGCATCCTGCGCAACCTGCACGGCG
TCTATGCCGATGCCGAGCAATGGGACCGCGCCGCCCGCAGCGCCGACCGCATCCTGAAGCTGGTGCCCGACCAACCCGAG
GCCCTGCGCGACCGCGGCATGGCCTATCTGCATCTGGGCCACCGCAACGGCGCACGCCACGATCTCTCGCGCTACCTGGT
GCTCAACCCGGGCGCGCAGGACGCGGCTAATCTGCATGAACACCTGGTGGAATTGAACAGCCAGCGCGCGCGGGCGCATT
GA

Upstream 100 bases:

>100_bases
GCGTCACCTTCCCGAACGGCGCCTGCGGCCGTCGGACGCAGCGCCGCCTGTCGGCGTTACGCATGCATGCGGCCCGTGTC
CCTGTCAGGAAGTACCGGAC

Downstream 100 bases:

>100_bases
GCCGGTCTACGCGCTGGCTGGGTAGGCCAGGCTACCCAGATAGGGCATCGCCGTGTGGTTCTCGGCAACGCACGCATTCT
CGTGCCCCCATCGCAACAGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 293; Mature: 293

Protein sequence:

>293_residues
MNPAPLADTLGSMVDMLPLPHWTALASLDDDAVPLMSTALLIARDEYPQLDAGLYDTLVQSHVEHLRREVEAIDLWPLKM
AAVNRYLFDELGYSGNHDEYYDPRNSYLNQVFERRLGNPISLAMVQIEVARRLGIPLAGVSFPGHFLVRLPVDDGVLVMD
PFNGGRPLGVDELRERARPHLGGEIPDDRALAQILDPAPHRAILIRILRNLHGVYADAEQWDRAARSADRILKLVPDQPE
ALRDRGMAYLHLGHRNGARHDLSRYLVLNPGAQDAANLHEHLVELNSQRARAH

Sequences:

>Translated_293_residues
MNPAPLADTLGSMVDMLPLPHWTALASLDDDAVPLMSTALLIARDEYPQLDAGLYDTLVQSHVEHLRREVEAIDLWPLKM
AAVNRYLFDELGYSGNHDEYYDPRNSYLNQVFERRLGNPISLAMVQIEVARRLGIPLAGVSFPGHFLVRLPVDDGVLVMD
PFNGGRPLGVDELRERARPHLGGEIPDDRALAQILDPAPHRAILIRILRNLHGVYADAEQWDRAARSADRILKLVPDQPE
ALRDRGMAYLHLGHRNGARHDLSRYLVLNPGAQDAANLHEHLVELNSQRARAH
>Mature_293_residues
MNPAPLADTLGSMVDMLPLPHWTALASLDDDAVPLMSTALLIARDEYPQLDAGLYDTLVQSHVEHLRREVEAIDLWPLKM
AAVNRYLFDELGYSGNHDEYYDPRNSYLNQVFERRLGNPISLAMVQIEVARRLGIPLAGVSFPGHFLVRLPVDDGVLVMD
PFNGGRPLGVDELRERARPHLGGEIPDDRALAQILDPAPHRAILIRILRNLHGVYADAEQWDRAARSADRILKLVPDQPE
ALRDRGMAYLHLGHRNGARHDLSRYLVLNPGAQDAANLHEHLVELNSQRARAH

Specific function: Unknown

COG id: COG2912

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 TPR repeats [H]

Homologues:

Organism=Homo sapiens, GI16306500, Length=227, Percent_Identity=30.8370044052863, Blast_Score=88, Evalue=8e-18,
Organism=Homo sapiens, GI16306502, Length=194, Percent_Identity=31.9587628865979, Blast_Score=87, Evalue=1e-17,
Organism=Escherichia coli, GI1787465, Length=255, Percent_Identity=27.843137254902, Blast_Score=82, Evalue=5e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013026
- InterPro:   IPR011990
- InterPro:   IPR019734 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32863; Mature: 32863

Theoretical pI: Translated: 6.00; Mature: 6.00

Prosite motif: PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNPAPLADTLGSMVDMLPLPHWTALASLDDDAVPLMSTALLIARDEYPQLDAGLYDTLVQ
CCCCCHHHHHHHHHHHHCCCCHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHH
SHVEHLRREVEAIDLWPLKMAAVNRYLFDELGYSGNHDEYYDPRNSYLNQVFERRLGNPI
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCH
SLAMVQIEVARRLGIPLAGVSFPGHFLVRLPVDDGVLVMDPFNGGRPLGVDELRERARPH
HHHHHHHHHHHHHCCCEECCCCCCEEEEEEECCCCEEEECCCCCCCCCCHHHHHHHHCCC
LGGEIPDDRALAQILDPAPHRAILIRILRNLHGVYADAEQWDRAARSADRILKLVPDQPE
CCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHH
ALRDRGMAYLHLGHRNGARHDLSRYLVLNPGAQDAANLHEHLVELNSQRARAH
HHHHCCCEEEEECCCCCCHHHHCCEEEECCCCHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNPAPLADTLGSMVDMLPLPHWTALASLDDDAVPLMSTALLIARDEYPQLDAGLYDTLVQ
CCCCCHHHHHHHHHHHHCCCCHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHH
SHVEHLRREVEAIDLWPLKMAAVNRYLFDELGYSGNHDEYYDPRNSYLNQVFERRLGNPI
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCH
SLAMVQIEVARRLGIPLAGVSFPGHFLVRLPVDDGVLVMDPFNGGRPLGVDELRERARPH
HHHHHHHHHHHHHCCCEECCCCCCEEEEEEECCCCEEEECCCCCCCCCCHHHHHHHHCCC
LGGEIPDDRALAQILDPAPHRAILIRILRNLHGVYADAEQWDRAARSADRILKLVPDQPE
CCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHH
ALRDRGMAYLHLGHRNGARHDLSRYLVLNPGAQDAANLHEHLVELNSQRARAH
HHHHCCCEEEEECCCCCCHHHHCCEEEECCCCHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10910347 [H]