Definition Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome.
Accession NC_003919
Length 5,175,554

Click here to switch to the map view.

The map label for this gene is 21244137

Identifier: 21244137

GI number: 21244137

Start: 4017767

End: 4018216

Strand: Direct

Name: 21244137

Synonym: XAC3412

Alternate gene names: NA

Gene position: 4017767-4018216 (Clockwise)

Preceding gene: 77748714

Following gene: 21244138

Centisome position: 77.63

GC content: 63.56

Gene sequence:

>450_bases
ATGCGTTGTGTTCGTTTTATGATCCTTGCGCTTCTGGTCCTGCTTGGCGGCTGCGCCAGCAGCGGCGACAGCTGGGTGGA
ACTGGCAGGCACGCGCTACAAGGTAGAACTGGCGCGCAACGATGCCGATCGCGCCAAGGGGCTGATGTTTCGCGATGCCA
TGGACCAGGACCGCGGCATGCTGTTCATCCACGACCGCCAGGAGCCGATGGCGTACTGGATGAAGAACACCAAAATCGCG
CTGGATATCCTGTATTTCGATGAGCAGCGCCGGCTGGTTTCCCAGCAGCGCGATGTGCCGCCGTGTTCGGCCGGCGACGC
CTGTCCGCCCTACCCCAGCAAGCAGCCCGCGCGCTACGTGCTGGAGCTAAATGCCGGCCAGGCCGCCAAGCTCGGCCTCA
AGGATGGCGCCACGCTGCGCTTCAGCCCGGACATCCCGACGCTCAAGTAA

Upstream 100 bases:

>100_bases
CACACATCGCGCTTGCAGCAACCGCACAACGCACCGCAGCAGCTTGACGCACACGGCCGCTTGGCAGATCGTGCGGCATC
CTTGCCAGTTGGTATGCCGC

Downstream 100 bases:

>100_bases
GCGGCTGCGCGCAGGCTCTAGGGCCATGCCAGCCAGGGGCATGGCGGCCTGCCGATGGGTGAGACCTGCGCGTCACCTTC
CCGAACGGCGCCTGCGGCCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 149; Mature: 149

Protein sequence:

>149_residues
MRCVRFMILALLVLLGGCASSGDSWVELAGTRYKVELARNDADRAKGLMFRDAMDQDRGMLFIHDRQEPMAYWMKNTKIA
LDILYFDEQRRLVSQQRDVPPCSAGDACPPYPSKQPARYVLELNAGQAAKLGLKDGATLRFSPDIPTLK

Sequences:

>Translated_149_residues
MRCVRFMILALLVLLGGCASSGDSWVELAGTRYKVELARNDADRAKGLMFRDAMDQDRGMLFIHDRQEPMAYWMKNTKIA
LDILYFDEQRRLVSQQRDVPPCSAGDACPPYPSKQPARYVLELNAGQAAKLGLKDGATLRFSPDIPTLK
>Mature_149_residues
MRCVRFMILALLVLLGGCASSGDSWVELAGTRYKVELARNDADRAKGLMFRDAMDQDRGMLFIHDRQEPMAYWMKNTKIA
LDILYFDEQRRLVSQQRDVPPCSAGDACPPYPSKQPARYVLELNAGQAAKLGLKDGATLRFSPDIPTLK

Specific function: Unknown

COG id: COG1430

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16740; Mature: 16740

Theoretical pI: Translated: 8.62; Mature: 8.62

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
7.4 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
7.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRCVRFMILALLVLLGGCASSGDSWVELAGTRYKVELARNDADRAKGLMFRDAMDQDRGM
CHHHHHHHHHHHHHHCCCCCCCCCEEEECCCEEEEEEECCCHHHHHCEEHHCCCCCCCCE
LFIHDRQEPMAYWMKNTKIALDILYFDEQRRLVSQQRDVPPCSAGDACPPYPSKQPARYV
EEEECCCCCHHHHHCCCEEEEEEEEECHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEE
LELNAGQAAKLGLKDGATLRFSPDIPTLK
EEECCCCEEEECCCCCCEEEECCCCCCCC
>Mature Secondary Structure
MRCVRFMILALLVLLGGCASSGDSWVELAGTRYKVELARNDADRAKGLMFRDAMDQDRGM
CHHHHHHHHHHHHHHCCCCCCCCCEEEECCCEEEEEEECCCHHHHHCEEHHCCCCCCCCE
LFIHDRQEPMAYWMKNTKIALDILYFDEQRRLVSQQRDVPPCSAGDACPPYPSKQPARYV
EEEECCCCCHHHHHCCCEEEEEEEEECHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEE
LELNAGQAAKLGLKDGATLRFSPDIPTLK
EEECCCCEEEECCCCCCEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA