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The map label for this gene is tcp [H]

Identifier: 21243997

GI number: 21243997

Start: 3853021

End: 3853479

Strand: Reverse

Name: tcp [H]

Synonym: XAC3271

Alternate gene names: 21243997

Gene position: 3853479-3853021 (Counterclockwise)

Preceding gene: 21243999

Following gene: 21243996

Centisome position: 74.46

GC content: 62.96

Gene sequence:

>459_bases
GTGACCGAGGCGGGGCATGGCGCCAAGCTGGTGGAGATAGCCGGCCGAACCATGCAGGAATTGCTGAGCTCGGTGAAAGA
GTTCAGTCAGATCGTGGGCACTATCGCAGCGGCTAGCAGCGAGCAAAACGTTGGCATCGAGCAGATCAGCCAGATAGACG
GCGCGACACAGCAGAATGCCACGCTGGTGGATACCATGGGGTCGTCGGCTCGTTCGTTGGAGAACCAAGCCTCGTTGCTT
GTGCAAAGCGTGGCAGAGCGCGGACGCTGCGCCCCGGCCGAGACTGCGCTAGCGCTCGCATGCCAGGTCCTGTTTCTCGG
CCCAGCCGGAGCGTTGTGCACTGCCGTTGCCGGCAGTTGCAATGCGGTCACGGGGCCTGCTTCAAGTGAGGTCAAGAATT
TGGTATGGCCTGGCCAGGCACGCAGTGGCGCACCAGGGTTTCGCTGGCCGCGGCTCTGA

Upstream 100 bases:

>100_bases
GTCATCGATAAGAGCCTCAGAGATCATCTTTCTAGCGGCACAGACAGCATCTTCTGTAGTAGGTAGGCAATGGCTTTGTA
AGTAAAAATAGCTTAAGTCG

Downstream 100 bases:

>100_bases
GATGCGAAGATGTAGAAGGTCGCAGAAACTGAGGCGGCCACTCTATCGGTGGGTGAGGGCGAGGCATTTGCCCGCACAAG
CTTGCCAGCGCTAGCTGTGG

Product: chemotaxis transducer

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 152; Mature: 151

Protein sequence:

>152_residues
MTEAGHGAKLVEIAGRTMQELLSSVKEFSQIVGTIAAASSEQNVGIEQISQIDGATQQNATLVDTMGSSARSLENQASLL
VQSVAERGRCAPAETALALACQVLFLGPAGALCTAVAGSCNAVTGPASSEVKNLVWPGQARSGAPGFRWPRL

Sequences:

>Translated_152_residues
MTEAGHGAKLVEIAGRTMQELLSSVKEFSQIVGTIAAASSEQNVGIEQISQIDGATQQNATLVDTMGSSARSLENQASLL
VQSVAERGRCAPAETALALACQVLFLGPAGALCTAVAGSCNAVTGPASSEVKNLVWPGQARSGAPGFRWPRL
>Mature_151_residues
TEAGHGAKLVEIAGRTMQELLSSVKEFSQIVGTIAAASSEQNVGIEQISQIDGATQQNATLVDTMGSSARSLENQASLLV
QSVAERGRCAPAETALALACQVLFLGPAGALCTAVAGSCNAVTGPASSEVKNLVWPGQARSGAPGFRWPRL

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: COG0840

COG function: function code NT; Methyl-accepting chemotaxis protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1788194, Length=84, Percent_Identity=46.4285714285714, Blast_Score=62, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR003122
- InterPro:   IPR004091
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal; PF02203 TarH [H]

EC number: NA

Molecular weight: Translated: 15568; Mature: 15437

Theoretical pI: Translated: 5.11; Mature: 5.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEAGHGAKLVEIAGRTMQELLSSVKEFSQIVGTIAAASSEQNVGIEQISQIDGATQQNA
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCC
TLVDTMGSSARSLENQASLLVQSVAERGRCAPAETALALACQVLFLGPAGALCTAVAGSC
CHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHCCC
NAVTGPASSEVKNLVWPGQARSGAPGFRWPRL
CCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TEAGHGAKLVEIAGRTMQELLSSVKEFSQIVGTIAAASSEQNVGIEQISQIDGATQQNA
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCC
TLVDTMGSSARSLENQASLLVQSVAERGRCAPAETALALACQVLFLGPAGALCTAVAGSC
CHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHCCC
NAVTGPASSEVKNLVWPGQARSGAPGFRWPRL
CCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 2496104 [H]