| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
Click here to switch to the map view.
The map label for this gene is 21243996
Identifier: 21243996
GI number: 21243996
Start: 3851918
End: 3852886
Strand: Reverse
Name: 21243996
Synonym: XAC3270
Alternate gene names: NA
Gene position: 3852886-3851918 (Counterclockwise)
Preceding gene: 21243997
Following gene: 21243995
Centisome position: 74.44
GC content: 57.89
Gene sequence:
>969_bases GTGCGTGGATGTTCGTGTGTAGAGAGAGTTCTGGTTTGCGTTACAGACAGCTCGCAGCAAATTTCTGATGACGACAGTGA GGGTAAACAAATGGCACATCCAGTTGCCACAAACGCTGATCTTGCCGATGCGCTGGCAGCCTTAGACGCACGAGACGACG CAGCGAGTAGTCGTCATCTCGAGCGCGCTGCGCGCCAAGGCTCCATCATGGGACGCGCCATCAGGGACGTCCTGGATGAT GGGAACTCTCGCAACGCCTATGACAAACCGCGGGCCTTTGAACTCTTTGTTCGTGGCGGGGGCAACCTTGCCCTCTATGA AGCCGTAAGCGCGGAGTTGGCCAAACTCTACGATGCGCTTCGGCCAAGCACTTTGTTAGACATTGGCGCGGGCGATGGCA TGGCGTTGGTGCCTGCAATCGAGGCAAGCGGTCATGTGCCCGATCAAATTGACGTTGTTGAGCCCAACGATGTGCTCTTG GGCAAGCTGATAGCGTCGCTCCCTCTCGTCCGGGGGTATCGGATGACGATGGAGAATTTTGCAGAAGGGTTTGATGACGA GGACCATTGGGACTTGGCGCAATCCACGTTCGCTCTCCAGTCGATCGAGACAAAGACTCGTGAGCAGGCGTTGGCAGCCT TGGCTGGTCATGTGGATCGACTTGTCATCGTTGAGTTCGATGTGCCAGATCTGACCCCAAACAGCGACGCCTATTACCAA TCGCTTGCTCACCGCTATGAACGGGCCGCGTCGGAGTATAGTGAGGACGCTGCGCTGGTAGCCGGAGGATTCCTTGCGCC CATGCTCTTGGGGCAGCTTCGATCCATCGCGCCCTCCAACCATGAGCAGCCGGCAGACGCTTGGGTGGCCGAGCTGGAGA GGGCGGGCTACCGCGTGCTTAGTAGAGCCAACCTGCACGATTACAGCTGGTCGACTGCGTTCTCGCTGACCGCTGCTCCA AAAGGCTGA
Upstream 100 bases:
>100_bases CGGCCACTCTATCGGTGGGTGAGGGCGAGGCATTTGCCCGCACAAGCTTGCCAGCGCTAGCTGTGGATCATTCACGTGGA TACGAACTTGCAACCCGCCA
Downstream 100 bases:
>100_bases GTCGGCAAGCTATCCCATCAGGTCTAGGTGGCATGCAAGGAGCGCCACCGCGTGTAGTGGTGGCGATGCCATGTCTCATG TGGTGCGACAACGCCACCGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 322; Mature: 322
Protein sequence:
>322_residues MRGCSCVERVLVCVTDSSQQISDDDSEGKQMAHPVATNADLADALAALDARDDAASSRHLERAARQGSIMGRAIRDVLDD GNSRNAYDKPRAFELFVRGGGNLALYEAVSAELAKLYDALRPSTLLDIGAGDGMALVPAIEASGHVPDQIDVVEPNDVLL GKLIASLPLVRGYRMTMENFAEGFDDEDHWDLAQSTFALQSIETKTREQALAALAGHVDRLVIVEFDVPDLTPNSDAYYQ SLAHRYERAASEYSEDAALVAGGFLAPMLLGQLRSIAPSNHEQPADAWVAELERAGYRVLSRANLHDYSWSTAFSLTAAP KG
Sequences:
>Translated_322_residues MRGCSCVERVLVCVTDSSQQISDDDSEGKQMAHPVATNADLADALAALDARDDAASSRHLERAARQGSIMGRAIRDVLDD GNSRNAYDKPRAFELFVRGGGNLALYEAVSAELAKLYDALRPSTLLDIGAGDGMALVPAIEASGHVPDQIDVVEPNDVLL GKLIASLPLVRGYRMTMENFAEGFDDEDHWDLAQSTFALQSIETKTREQALAALAGHVDRLVIVEFDVPDLTPNSDAYYQ SLAHRYERAASEYSEDAALVAGGFLAPMLLGQLRSIAPSNHEQPADAWVAELERAGYRVLSRANLHDYSWSTAFSLTAAP KG >Mature_322_residues MRGCSCVERVLVCVTDSSQQISDDDSEGKQMAHPVATNADLADALAALDARDDAASSRHLERAARQGSIMGRAIRDVLDD GNSRNAYDKPRAFELFVRGGGNLALYEAVSAELAKLYDALRPSTLLDIGAGDGMALVPAIEASGHVPDQIDVVEPNDVLL GKLIASLPLVRGYRMTMENFAEGFDDEDHWDLAQSTFALQSIETKTREQALAALAGHVDRLVIVEFDVPDLTPNSDAYYQ SLAHRYERAASEYSEDAALVAGGFLAPMLLGQLRSIAPSNHEQPADAWVAELERAGYRVLSRANLHDYSWSTAFSLTAAP KG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34806; Mature: 34806
Theoretical pI: Translated: 4.40; Mature: 4.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRGCSCVERVLVCVTDSSQQISDDDSEGKQMAHPVATNADLADALAALDARDDAASSRHL CCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHCCCCHHHHHHHH ERAARQGSIMGRAIRDVLDDGNSRNAYDKPRAFELFVRGGGNLALYEAVSAELAKLYDAL HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCEEHHHHHHHHHHHHHHHH RPSTLLDIGAGDGMALVPAIEASGHVPDQIDVVEPNDVLLGKLIASLPLVRGYRMTMENF CCCCEEEECCCCCEEEEEEECCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHH AEGFDDEDHWDLAQSTFALQSIETKTREQALAALAGHVDRLVIVEFDVPDLTPNSDAYYQ HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCHHHHH SLAHRYERAASEYSEDAALVAGGFLAPMLLGQLRSIAPSNHEQPADAWVAELERAGYRVL HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH SRANLHDYSWSTAFSLTAAPKG HHCCCCCCCCCCEEEEECCCCC >Mature Secondary Structure MRGCSCVERVLVCVTDSSQQISDDDSEGKQMAHPVATNADLADALAALDARDDAASSRHL CCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHCCCCHHHHHHHH ERAARQGSIMGRAIRDVLDDGNSRNAYDKPRAFELFVRGGGNLALYEAVSAELAKLYDAL HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCEEHHHHHHHHHHHHHHHH RPSTLLDIGAGDGMALVPAIEASGHVPDQIDVVEPNDVLLGKLIASLPLVRGYRMTMENF CCCCEEEECCCCCEEEEEEECCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHH AEGFDDEDHWDLAQSTFALQSIETKTREQALAALAGHVDRLVIVEFDVPDLTPNSDAYYQ HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCHHHHH SLAHRYERAASEYSEDAALVAGGFLAPMLLGQLRSIAPSNHEQPADAWVAELERAGYRVL HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH SRANLHDYSWSTAFSLTAAPKG HHCCCCCCCCCCEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA