| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21243671
Identifier: 21243671
GI number: 21243671
Start: 3449278
End: 3449919
Strand: Direct
Name: 21243671
Synonym: XAC2944
Alternate gene names: NA
Gene position: 3449278-3449919 (Clockwise)
Preceding gene: 21243670
Following gene: 21243672
Centisome position: 66.65
GC content: 66.98
Gene sequence:
>642_bases ATGTCGACCACAGACCACGCTCACCTCGCCAGCGCGCAGCAACGCCGCGGCTTCTGGCTGCGCATGCTGCATCAGTGGCA CTGGATCAGCTCGGCGCTGTGCCTGATCGGCATGCTGTTGTTCACCGTCACCGGGCTGACCTTGAATCACGCCGCGCGCA TCGAAGCCAGCCCATCGACCGAACAACGCACGCTGACGCTGCCGCCCGCGCTGCTGCAGACGCTGGGCCGGCGTCAGGAC GGCAATGCACCGCTGCCGCCGCGCGTGGCGCAATGGCTGGGGCGCGAGCTCGATATCAGCATCGGCACGCGCAACGGCGA ATGGTCGGCGGACGAGGTGTATGTCGCGCTGCCACGCCCCGGCGGCGATGCCTGGCTGAGCCTGGACCGCCGCACCGGCG CGATCGAATACGAACGCACTGCGCGCGGCTGGGTCGCCTATCTCAACGATCTGCATAAGGGCCGCAACGCCGGGCCGGCC TGGGGCTGGTTTATCGATGTCTTTGCGATCGCCTGCCTGGTGTTCTGCATCACCGGCCTGTTCCTTCTCCACCTGCATGC ACGGCAGCGGCGCATGACCTGGCCGCTGGTCGGTCTTGGCCTGCTGATTCCGCTGTTGCTCGCCCTGCTGTTGATCCACT GA
Upstream 100 bases:
>100_bases GGCGCGCGCCATCCGCGCCTGCGCGCCTTGCTGCACGAGGTGGCTGCACGGCAGCGGCAACTGCAGCCTTGCGTCCCCGC AGACGTGGCCTGAGCGCAGC
Downstream 100 bases:
>100_bases CTTTTCTACCGGAGACGATCATGCGCGCCACCCTGACCATCGCCCTGAGCGGCCTGCTCGCCATGCCGGCGTATGCCGCC ACACTCGACATCAACGTCGA
Product: hypothetical protein
Products: NA
Alternate protein names: PepSY-Associated TM Helix Domain-Containing Protein; PepSY-Associated TM Helix Family; PepSY-Associated TM Helix Domain Protein; Membrane-Associated Protein; Plasmolipin; Pepsy-Associated Tm Helix Domain Protein
Number of amino acids: Translated: 213; Mature: 212
Protein sequence:
>213_residues MSTTDHAHLASAQQRRGFWLRMLHQWHWISSALCLIGMLLFTVTGLTLNHAARIEASPSTEQRTLTLPPALLQTLGRRQD GNAPLPPRVAQWLGRELDISIGTRNGEWSADEVYVALPRPGGDAWLSLDRRTGAIEYERTARGWVAYLNDLHKGRNAGPA WGWFIDVFAIACLVFCITGLFLLHLHARQRRMTWPLVGLGLLIPLLLALLLIH
Sequences:
>Translated_213_residues MSTTDHAHLASAQQRRGFWLRMLHQWHWISSALCLIGMLLFTVTGLTLNHAARIEASPSTEQRTLTLPPALLQTLGRRQD GNAPLPPRVAQWLGRELDISIGTRNGEWSADEVYVALPRPGGDAWLSLDRRTGAIEYERTARGWVAYLNDLHKGRNAGPA WGWFIDVFAIACLVFCITGLFLLHLHARQRRMTWPLVGLGLLIPLLLALLLIH >Mature_212_residues STTDHAHLASAQQRRGFWLRMLHQWHWISSALCLIGMLLFTVTGLTLNHAARIEASPSTEQRTLTLPPALLQTLGRRQDG NAPLPPRVAQWLGRELDISIGTRNGEWSADEVYVALPRPGGDAWLSLDRRTGAIEYERTARGWVAYLNDLHKGRNAGPAW GWFIDVFAIACLVFCITGLFLLHLHARQRRMTWPLVGLGLLIPLLLALLLIH
Specific function: Unknown
COG id: COG3295
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23920; Mature: 23789
Theoretical pI: Translated: 9.84; Mature: 9.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTTDHAHLASAQQRRGFWLRMLHQWHWISSALCLIGMLLFTVTGLTLNHAARIEASPST CCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCEEECCCCCC EQRTLTLPPALLQTLGRRQDGNAPLPPRVAQWLGRELDISIGTRNGEWSADEVYVALPRP CCEEEECCHHHHHHHCCCCCCCCCCCHHHHHHCCCEEEEEEECCCCCCCCCCEEEEECCC GGDAWLSLDRRTGAIEYERTARGWVAYLNDLHKGRNAGPAWGWFIDVFAIACLVFCITGL CCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH FLLHLHARQRRMTWPLVGLGLLIPLLLALLLIH HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure STTDHAHLASAQQRRGFWLRMLHQWHWISSALCLIGMLLFTVTGLTLNHAARIEASPST CCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCEEECCCCCC EQRTLTLPPALLQTLGRRQDGNAPLPPRVAQWLGRELDISIGTRNGEWSADEVYVALPRP CCEEEECCHHHHHHHCCCCCCCCCCCHHHHHHCCCEEEEEEECCCCCCCCCCEEEEECCC GGDAWLSLDRRTGAIEYERTARGWVAYLNDLHKGRNAGPAWGWFIDVFAIACLVFCITGL CCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH FLLHLHARQRRMTWPLVGLGLLIPLLLALLLIH HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA