| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21243672
Identifier: 21243672
GI number: 21243672
Start: 3449940
End: 3450455
Strand: Direct
Name: 21243672
Synonym: XAC2945
Alternate gene names: NA
Gene position: 3449940-3450455 (Clockwise)
Preceding gene: 21243671
Following gene: 21243673
Centisome position: 66.66
GC content: 66.86
Gene sequence:
>516_bases ATGCGCGCCACCCTGACCATCGCCCTGAGCGGCCTGCTCGCCATGCCGGCGTATGCCGCCACACTCGACATCAACGTCGA AATCCCCAAGCTCAACGTCGCCGAGTACCACCGCCCGTATGTTGCGGTCTGGCTGGAAGGCGCAGATCAGAAGGTCGCCG CCAATCTGGCGGTCTGGTATCAATCCAGGGACACCGCCGAAGGCCACGGCACCAAATGGCTGCCGGATCTGCGCCAGTGG TGGCGCAAGAGCGGCCGCACCCTGAGCGTGCCGGTCGATGGCGTCACCGGCCCCACCCGGCCGGCCGGCGCGCATGCGCT GTCGTTCTCCGATAGCAAGGGCGCATTGAAGTCGCTGCCGTCGGGGCAATACACGCTGGTGGTGGAAGCCGCACGCGAAG TTGGCGGCCGCGAACTGGTCAAGCTGCCTTTCACCTGGCCGGCGACGTCCGCGCAGACAGCCAAAGCCAGCGGCAGCAGC GAGCTCGGTGCGATCAGCCTGGTTGCAAAGCCCTGA
Upstream 100 bases:
>100_bases GGCAGCGGCGCATGACCTGGCCGCTGGTCGGTCTTGGCCTGCTGATTCCGCTGTTGCTCGCCCTGCTGTTGATCCACTGA CTTTTCTACCGGAGACGATC
Downstream 100 bases:
>100_bases CTGCTGCGTTGGCGTTCGCAGCGCCGTGCACCGCGCCTTGCGTCGTCGTGCAAGGTGCGCCCTGGGCATTGAACCAAGGT CTGTCGCTCAAGACCCATCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 171; Mature: 171
Protein sequence:
>171_residues MRATLTIALSGLLAMPAYAATLDINVEIPKLNVAEYHRPYVAVWLEGADQKVAANLAVWYQSRDTAEGHGTKWLPDLRQW WRKSGRTLSVPVDGVTGPTRPAGAHALSFSDSKGALKSLPSGQYTLVVEAAREVGGRELVKLPFTWPATSAQTAKASGSS ELGAISLVAKP
Sequences:
>Translated_171_residues MRATLTIALSGLLAMPAYAATLDINVEIPKLNVAEYHRPYVAVWLEGADQKVAANLAVWYQSRDTAEGHGTKWLPDLRQW WRKSGRTLSVPVDGVTGPTRPAGAHALSFSDSKGALKSLPSGQYTLVVEAAREVGGRELVKLPFTWPATSAQTAKASGSS ELGAISLVAKP >Mature_171_residues MRATLTIALSGLLAMPAYAATLDINVEIPKLNVAEYHRPYVAVWLEGADQKVAANLAVWYQSRDTAEGHGTKWLPDLRQW WRKSGRTLSVPVDGVTGPTRPAGAHALSFSDSKGALKSLPSGQYTLVVEAAREVGGRELVKLPFTWPATSAQTAKASGSS ELGAISLVAKP
Specific function: Unknown
COG id: COG3656
COG function: function code S; Predicted periplasmic protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18252; Mature: 18252
Theoretical pI: Translated: 9.92; Mature: 9.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRATLTIALSGLLAMPAYAATLDINVEIPKLNVAEYHRPYVAVWLEGADQKVAANLAVWY CCEEEEEEEHHHHHCCCEEEEEEEEEEECCCCHHHHCCCEEEEEEECCCCEEEEEEEEEE QSRDTAEGHGTKWLPDLRQWWRKSGRTLSVPVDGVTGPTRPAGAHALSFSDSKGALKSLP ECCCCCCCCCCCCCHHHHHHHHHCCCEEEEECCCCCCCCCCCCCEEEEECCCCCHHHCCC SGQYTLVVEAAREVGGRELVKLPFTWPATSAQTAKASGSSELGAISLVAKP CCCEEEEEEEHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEECC >Mature Secondary Structure MRATLTIALSGLLAMPAYAATLDINVEIPKLNVAEYHRPYVAVWLEGADQKVAANLAVWY CCEEEEEEEHHHHHCCCEEEEEEEEEEECCCCHHHHCCCEEEEEEECCCCEEEEEEEEEE QSRDTAEGHGTKWLPDLRQWWRKSGRTLSVPVDGVTGPTRPAGAHALSFSDSKGALKSLP ECCCCCCCCCCCCCHHHHHHHHHCCCEEEEECCCCCCCCCCCCCEEEEECCCCCHHHCCC SGQYTLVVEAAREVGGRELVKLPFTWPATSAQTAKASGSSELGAISLVAKP CCCEEEEEEEHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA