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The map label for this gene is ynhC [H]

Identifier: 21243664

GI number: 21243664

Start: 3441614

End: 3442876

Strand: Direct

Name: ynhC [H]

Synonym: XAC2937

Alternate gene names: 21243664

Gene position: 3441614-3442876 (Clockwise)

Preceding gene: 21243663

Following gene: 21243665

Centisome position: 66.5

GC content: 68.25

Gene sequence:

>1263_bases
ATGAGTGCCCTGCTTGACTCCCTGGCGCGCGGGTTCAGCGGCAGTGATGCACGCCGCGCCGAGCTCGATGCCGCCCTGCA
GACCGGCCTGCCCGGCCCACGTGCCGAGGCCTGGAAATACACCTCGTTGCGGCAGCTGGAACGGCGCAGCTTTCAGCCCG
CCCCGTTGGTCCCGACGCTGGTGGATGCGGCCGCGCTGGACGATATCCCATCGCCGCGCCTGGTCTTGGTCAATGGCCGC
CCGTCCGAAGCGCTCAGCGATCTGTCCACGTTGCCGGAAGGCGTGCAGTTGGACACGCTGTCTGCATCGTTGGCCGCAAG
CGACCAGGCGCAGCAGTTACTGGGCCGCCGCTTCGACGGCAGCGACGAGGTCTTTGCGCGCCTGAATGCCGCGCTTGCCG
ACGAAGGCGTGCTGGTGCGCGTGCATGCCGGCGCGCAGATCGAGCTGCCACTGCATTTGGTGTTCGTCGGCGTGGCCGGC
GAGCAGGATCTGTCGTGGCATCACCGCCATCTGATCGAATTGCGTGCCGGCGCTGCGCTGCAGGTAATCGAGCATCACCT
GCATGTCGGCGACGCCGCCCATCTGGAGAACAGCGTGATGCACGTGCATCTGGCACAGGGCGCAGCGCTGTCGCACGCGC
GCGTGCAGGCCGGCAGCGCACATGCGACGTCGCTGCTGCGCACCGACGCGGTGCTGGCGCGCGACGCGCGCTACCAGCGC
GTGGACCTGGAACTGGGTGCCGGCCTGTCGCGGCACGAGCTCAACGTGCGCCTGGAAGGCAACAACGCCCAGCTGACCGC
CAATGGCGTGCTGCTCGGCAACGGCCGCCGGCATGTGGACACGCGGCTGGGCATCGAGCACATCGCGCGCGACACCGCCT
GCGAACTGGTATGGCGCGGTGTGGGCGCGGACCGCAGCCGCGTGGTCTTCCATGGTGGCATCCGCATCCGCGCAGGTGCC
GACGGCACCGATGCACGGCTGTCCAACAAGAATCTGCTGCTGTCGTCCAATGCCGAAATCGACACCCAGCCGGTGCTGGT
GATCGATGCCGACGAGGTACAAGCCGCGCATGGCGCCACGGTGGGCCAGCTCGACGACAACGCCTTGTTCTACCTGCGCT
CGCGCGGCTTGCCGCAGGAACAGGCGCAACGCCTGCTGAGTGCCGCGTTCTGTCACGAACCCTTGCGCGTGCTGCCGCCC
GCCTTGAGCGCCGTGCTGGCGCTGCAACTGGACCGTGCATTGAATTCGGCGGGCGTGGCATGA

Upstream 100 bases:

>100_bases
GCCGCATCGTACAGAGCGGCGGCCCGGAACTGGCGCTGGAACTGGAAAAGCACGGTTATCACTTCCTGAAAGACCGCGTC
GTGCCCGAGGTTGCCGCCTG

Downstream 100 bases:

>100_bases
ACGTGTCCGCCGTTCCGCCCAGCGCAACGCCCGACTGGGACCGCGTGCGCCTGGATTTCCCGCTGCTGATGCGGCAGGTG
CATGGCAAGCCGCTGATCTA

Product: ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 420; Mature: 419

Protein sequence:

>420_residues
MSALLDSLARGFSGSDARRAELDAALQTGLPGPRAEAWKYTSLRQLERRSFQPAPLVPTLVDAAALDDIPSPRLVLVNGR
PSEALSDLSTLPEGVQLDTLSASLAASDQAQQLLGRRFDGSDEVFARLNAALADEGVLVRVHAGAQIELPLHLVFVGVAG
EQDLSWHHRHLIELRAGAALQVIEHHLHVGDAAHLENSVMHVHLAQGAALSHARVQAGSAHATSLLRTDAVLARDARYQR
VDLELGAGLSRHELNVRLEGNNAQLTANGVLLGNGRRHVDTRLGIEHIARDTACELVWRGVGADRSRVVFHGGIRIRAGA
DGTDARLSNKNLLLSSNAEIDTQPVLVIDADEVQAAHGATVGQLDDNALFYLRSRGLPQEQAQRLLSAAFCHEPLRVLPP
ALSAVLALQLDRALNSAGVA

Sequences:

>Translated_420_residues
MSALLDSLARGFSGSDARRAELDAALQTGLPGPRAEAWKYTSLRQLERRSFQPAPLVPTLVDAAALDDIPSPRLVLVNGR
PSEALSDLSTLPEGVQLDTLSASLAASDQAQQLLGRRFDGSDEVFARLNAALADEGVLVRVHAGAQIELPLHLVFVGVAG
EQDLSWHHRHLIELRAGAALQVIEHHLHVGDAAHLENSVMHVHLAQGAALSHARVQAGSAHATSLLRTDAVLARDARYQR
VDLELGAGLSRHELNVRLEGNNAQLTANGVLLGNGRRHVDTRLGIEHIARDTACELVWRGVGADRSRVVFHGGIRIRAGA
DGTDARLSNKNLLLSSNAEIDTQPVLVIDADEVQAAHGATVGQLDDNALFYLRSRGLPQEQAQRLLSAAFCHEPLRVLPP
ALSAVLALQLDRALNSAGVA
>Mature_419_residues
SALLDSLARGFSGSDARRAELDAALQTGLPGPRAEAWKYTSLRQLERRSFQPAPLVPTLVDAAALDDIPSPRLVLVNGRP
SEALSDLSTLPEGVQLDTLSASLAASDQAQQLLGRRFDGSDEVFARLNAALADEGVLVRVHAGAQIELPLHLVFVGVAGE
QDLSWHHRHLIELRAGAALQVIEHHLHVGDAAHLENSVMHVHLAQGAALSHARVQAGSAHATSLLRTDAVLARDARYQRV
DLELGAGLSRHELNVRLEGNNAQLTANGVLLGNGRRHVDTRLGIEHIARDTACELVWRGVGADRSRVVFHGGIRIRAGAD
GTDARLSNKNLLLSSNAEIDTQPVLVIDADEVQAAHGATVGQLDDNALFYLRSRGLPQEQAQRLLSAAFCHEPLRVLPPA
LSAVLALQLDRALNSAGVA

Specific function: The sufBCD complex acts synergistically with sufE to stimulate the cysteine desulfurase activity of sufS. The sufBCD complex contributes to the assembly or repair of oxygen-labile iron-sulfur clusters under oxidative stress. May facilitate iron uptake fro

COG id: COG0719

COG function: function code O; ABC-type transport system involved in Fe-S cluster assembly, permease component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0051 (ycf24) family [H]

Homologues:

Organism=Escherichia coli, GI1787971, Length=371, Percent_Identity=34.5013477088949, Blast_Score=181, Evalue=5e-47,
Organism=Escherichia coli, GI87081955, Length=315, Percent_Identity=22.5396825396825, Blast_Score=86, Evalue=6e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000825
- InterPro:   IPR011542 [H]

Pfam domain/function: PF01458 UPF0051 [H]

EC number: NA

Molecular weight: Translated: 44903; Mature: 44772

Theoretical pI: Translated: 6.47; Mature: 6.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.2 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSALLDSLARGFSGSDARRAELDAALQTGLPGPRAEAWKYTSLRQLERRSFQPAPLVPTL
CHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHH
VDAAALDDIPSPRLVLVNGRPSEALSDLSTLPEGVQLDTLSASLAASDQAQQLLGRRFDG
HHHHHHCCCCCCCEEEEECCCHHHHHHHHHCCCCCEEEEHHHHHHCCHHHHHHHHCCCCC
SDEVFARLNAALADEGVLVRVHAGAQIELPLHLVFVGVAGEQDLSWHHRHLIELRAGAAL
CHHHHHHHHHHHCCCCEEEEEECCCEEEEEEEEEEEEECCCCCCCHHHHHHHHHHCCHHH
QVIEHHLHVGDAAHLENSVMHVHLAQGAALSHARVQAGSAHATSLLRTDAVLARDARYQR
HHHHHHHCCCCHHHHCCCEEEEEECCCCCHHHHHHCCCCHHHHHHHHHHHHHHHCCCCEE
VDLELGAGLSRHELNVRLEGNNAQLTANGVLLGNGRRHVDTRLGIEHIARDTACELVWRG
EEEHHCCCCCEEEEEEEEECCCEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHC
VGADRSRVVFHGGIRIRAGADGTDARLSNKNLLLSSNAEIDTQPVLVIDADEVQAAHGAT
CCCCCCEEEEECCEEEEECCCCCCCEECCCCEEEECCCCCCCCCEEEEECHHHHHHCCCE
VGQLDDNALFYLRSRGLPQEQAQRLLSAAFCHEPLRVLPPALSAVLALQLDRALNSAGVA
EECCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SALLDSLARGFSGSDARRAELDAALQTGLPGPRAEAWKYTSLRQLERRSFQPAPLVPTL
HHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHH
VDAAALDDIPSPRLVLVNGRPSEALSDLSTLPEGVQLDTLSASLAASDQAQQLLGRRFDG
HHHHHHCCCCCCCEEEEECCCHHHHHHHHHCCCCCEEEEHHHHHHCCHHHHHHHHCCCCC
SDEVFARLNAALADEGVLVRVHAGAQIELPLHLVFVGVAGEQDLSWHHRHLIELRAGAAL
CHHHHHHHHHHHCCCCEEEEEECCCEEEEEEEEEEEEECCCCCCCHHHHHHHHHHCCHHH
QVIEHHLHVGDAAHLENSVMHVHLAQGAALSHARVQAGSAHATSLLRTDAVLARDARYQR
HHHHHHHCCCCHHHHCCCEEEEEECCCCCHHHHHHCCCCHHHHHHHHHHHHHHHCCCCEE
VDLELGAGLSRHELNVRLEGNNAQLTANGVLLGNGRRHVDTRLGIEHIARDTACELVWRG
EEEHHCCCCCEEEEEEEEECCCEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHC
VGADRSRVVFHGGIRIRAGADGTDARLSNKNLLLSSNAEIDTQPVLVIDADEVQAAHGAT
CCCCCCEEEEECCEEEEECCCCCCCEECCCCEEEECCCCCCCCCEEEEECHHHHHHCCCE
VGQLDDNALFYLRSRGLPQEQAQRLLSAAFCHEPLRVLPPALSAVLALQLDRALNSAGVA
EECCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503; 10322040 [H]