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The map label for this gene is yagS [H]

Identifier: 21243621

GI number: 21243621

Start: 3394114

End: 3395064

Strand: Reverse

Name: yagS [H]

Synonym: XAC2894

Alternate gene names: 21243621

Gene position: 3395064-3394114 (Counterclockwise)

Preceding gene: 21243622

Following gene: 21243620

Centisome position: 65.6

GC content: 66.25

Gene sequence:

>951_bases
ATGAAAGCCTTTAGCTACGAACGGGCCAGCTCGCCAGCCGATGCCGCCGCCAAGGCCGCGCGCCAGCCCGGTGCCAAGTT
CATCGCAGGCGGGACCAACCTGCTCGATCTGATGAAGCTGCAGATCGAAACACCGTCGCACCTGATCGATGTCAACGGCC
TGAGCCTGGATACCATCGACGCCACGCCTGAGGGCGGCCTGCGCATCGGCGCATTGGTGCGCAACACCGATCTGGCGGCC
GACCAGCGCGTGCGCCGCGATTACGCCGTGTTGTCGCGCGCATTGCTGGCCGGTGCCTCGGGACAACTGCGCAACCGTGC
GACCACGGCAGGCAACCTGCTGCAACGGACGCGTTGTCCCTATTTCTACGACACCAACCAGCCATGCAACAAGCGACTGC
CTGGCAGCGGCTGCGCGGCCATCGGCGGCTATAACCGTCAACTGGCAGTGATTGGTGCCAGCGAGGCGTGCATCGCCACC
CATCCCAGCGATATGGCCATTGCCATGCGCCTGCTCGATGCGGTCGTGGAAACGGTGCGCCCGGATGGCCAGACACGCGC
CGTGGCCTTGTCCGAGTTCTACCGTGCACCGGGAACGACGCCGCATCTGGAAACCGTGCTGGAGCGCGGCGAATTGATCA
CCGCCGTCACCTTGCCCAAGCCGCTCGGTGGCACGCATGTGTATCGCAAGGTGCGCGACCGTGCCTCGTATGCTTTCGCC
CTGGTGTCGGTGGCCGCCGTCGTCCAGCGCGATGGCAGCGCACGCGTCGCAGTCGGCGGCGTCGCGCACAAGCCATGGCG
CAGCGAAGCCGCCGAAGCCAGATCGAAGGAGGGTGCCCGCGCCATTGCGTCCGTGCTGCTCGACGGCGCACGGCCCACCG
AACACAACGCATTCAAGGTGCCGCTGGTTGAGCGCACCTTGACCGCGATCTTGGCCGACACGAGGGCCTGA

Upstream 100 bases:

>100_bases
CCACGCCGGAATTGCAGGAACGCATGAGTGGCAATATCTGCCGTTGTGGTGCGTACTCCAACATCGTCGAAGCCATCGAC
GATGTTGCCGGAGGCCGCGC

Downstream 100 bases:

>100_bases
TATGAAATTCGACACTCCCGCCGGCACCAATCCCATCGATCAGCTTACGGTCGTCGGCAAGCCCGTCGACCGTATCGACG
GGCCACTCAAGACCACCGGG

Product: oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 316; Mature: 316

Protein sequence:

>316_residues
MKAFSYERASSPADAAAKAARQPGAKFIAGGTNLLDLMKLQIETPSHLIDVNGLSLDTIDATPEGGLRIGALVRNTDLAA
DQRVRRDYAVLSRALLAGASGQLRNRATTAGNLLQRTRCPYFYDTNQPCNKRLPGSGCAAIGGYNRQLAVIGASEACIAT
HPSDMAIAMRLLDAVVETVRPDGQTRAVALSEFYRAPGTTPHLETVLERGELITAVTLPKPLGGTHVYRKVRDRASYAFA
LVSVAAVVQRDGSARVAVGGVAHKPWRSEAAEARSKEGARAIASVLLDGARPTEHNAFKVPLVERTLTAILADTRA

Sequences:

>Translated_316_residues
MKAFSYERASSPADAAAKAARQPGAKFIAGGTNLLDLMKLQIETPSHLIDVNGLSLDTIDATPEGGLRIGALVRNTDLAA
DQRVRRDYAVLSRALLAGASGQLRNRATTAGNLLQRTRCPYFYDTNQPCNKRLPGSGCAAIGGYNRQLAVIGASEACIAT
HPSDMAIAMRLLDAVVETVRPDGQTRAVALSEFYRAPGTTPHLETVLERGELITAVTLPKPLGGTHVYRKVRDRASYAFA
LVSVAAVVQRDGSARVAVGGVAHKPWRSEAAEARSKEGARAIASVLLDGARPTEHNAFKVPLVERTLTAILADTRA
>Mature_316_residues
MKAFSYERASSPADAAAKAARQPGAKFIAGGTNLLDLMKLQIETPSHLIDVNGLSLDTIDATPEGGLRIGALVRNTDLAA
DQRVRRDYAVLSRALLAGASGQLRNRATTAGNLLQRTRCPYFYDTNQPCNKRLPGSGCAAIGGYNRQLAVIGASEACIAT
HPSDMAIAMRLLDAVVETVRPDGQTRAVALSEFYRAPGTTPHLETVLERGELITAVTLPKPLGGTHVYRKVRDRASYAFA
LVSVAAVVQRDGSARVAVGGVAHKPWRSEAAEARSKEGARAIASVLLDGARPTEHNAFKVPLVERTLTAILADTRA

Specific function: Unknown

COG id: COG1319

COG function: function code C; Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAD-binding PCMH-type domain [H]

Homologues:

Organism=Escherichia coli, GI1786479, Length=316, Percent_Identity=74.6835443037975, Blast_Score=494, Evalue=1e-141,
Organism=Escherichia coli, GI1789231, Length=277, Percent_Identity=27.7978339350181, Blast_Score=69, Evalue=4e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005107
- InterPro:   IPR016169
- InterPro:   IPR016166
- InterPro:   IPR016167
- InterPro:   IPR002346 [H]

Pfam domain/function: PF03450 CO_deh_flav_C; PF00941 FAD_binding_5 [H]

EC number: =1.17.1.4 [H]

Molecular weight: Translated: 33590; Mature: 33590

Theoretical pI: Translated: 10.02; Mature: 10.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKAFSYERASSPADAAAKAARQPGAKFIAGGTNLLDLMKLQIETPSHLIDVNGLSLDTID
CCCCCCCCCCCCHHHHHHHHHCCCCEEEECCCHHHHHHHHEECCCCEEEECCCCEEEECC
ATPEGGLRIGALVRNTDLAADQRVRRDYAVLSRALLAGASGQLRNRATTAGNLLQRTRCP
CCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCC
YFYDTNQPCNKRLPGSGCAAIGGYNRQLAVIGASEACIATHPSDMAIAMRLLDAVVETVR
CEECCCCCCCCCCCCCCCEEECCCCCEEEEEECCCCEEEECCHHHHHHHHHHHHHHHHHC
PDGQTRAVALSEFYRAPGTTPHLETVLERGELITAVTLPKPLGGTHVYRKVRDRASYAFA
CCCCHHHHHHHHHHHCCCCCHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHH
LVSVAAVVQRDGSARVAVGGVAHKPWRSEAAEARSKEGARAIASVLLDGARPTEHNAFKV
HHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEC
PLVERTLTAILADTRA
HHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKAFSYERASSPADAAAKAARQPGAKFIAGGTNLLDLMKLQIETPSHLIDVNGLSLDTID
CCCCCCCCCCCCHHHHHHHHHCCCCEEEECCCHHHHHHHHEECCCCEEEECCCCEEEECC
ATPEGGLRIGALVRNTDLAADQRVRRDYAVLSRALLAGASGQLRNRATTAGNLLQRTRCP
CCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCC
YFYDTNQPCNKRLPGSGCAAIGGYNRQLAVIGASEACIATHPSDMAIAMRLLDAVVETVR
CEECCCCCCCCCCCCCCCEEECCCCCEEEEEECCCCEEEECCHHHHHHHHHHHHHHHHHC
PDGQTRAVALSEFYRAPGTTPHLETVLERGELITAVTLPKPLGGTHVYRKVRDRASYAFA
CCCCHHHHHHHHHHHCCCCCHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHH
LVSVAAVVQRDGSARVAVGGVAHKPWRSEAAEARSKEGARAIASVLLDGARPTEHNAFKV
HHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEC
PLVERTLTAILADTRA
HHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]