| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is phoA [H]
Identifier: 21243486
GI number: 21243486
Start: 3230960
End: 3232666
Strand: Direct
Name: phoA [H]
Synonym: XAC2759
Alternate gene names: 21243486
Gene position: 3230960-3232666 (Clockwise)
Preceding gene: 21243482
Following gene: 21243487
Centisome position: 62.43
GC content: 68.83
Gene sequence:
>1707_bases ATGCCGATGCGTTACCGCCTGCCTACCCTCGCCGCCCTGACCACGCTGTGCGTCGCTGCCTGCGCTTCCACCACCGGGAG CGGCACCTCCGCACCCGCGTCGGTCCGCGTGGAGGTGCCGCCGGTCACGCACCCGGCCGGCGAAACCCCGCAATGGTGGT ACCGCTCGGGCGCCGCCCGCGCGGCCGGCAACGGCGCCATGGCCGGCAAGGCGCGCAACGTGATCCTGTTCCTGGGCGAT GGCATGAGCCTGACCACGGTGGCCGCCGCGCGCATCCTGGACGGCCAGCGCAAGGGCGGCCCAGGCGAAGAGAACCTGCT GTCGTGGGAGCAGTTTCCCGCCACCGCCTTCAGCAAGACCTACAACACCGACTCGCAGACGCCGGATTCTGCCGGCACCA TGACCTCCATCACCACCGGCGTGAAGTCGCACATGGGCGCGATCGGCGTCAGCAGCGGCAACCGCAGCGACTGCGCCGAC AGCTTGAACAAGGGCCTGCTGAGCTGGCTGCAGCTGGCCGACAGCGCCGGCATGGCCACCGGCATCGTCACCACCACGCG CCTGACCCATGCCACGCCGGCGGCAACCTATGCGCATTCGCCGGACCGCAACTGGGAAAACGACACCGACCTTCCCGAGT CGGCGCGTGCTGCCGGTTGCCAGGACATTGCCCAGCAATTGCTCTCCACCGCCCGCTACGGCCGAGGCCCGCAGGTGGTG CTGGGCGGAGGACGCAGCCAGTTCCAGAGCGTGCAGGAGCGCGACCCGGAATACGACGACAAGGTGGGCCTGCGCCTGGA CGGTCGCGATCTGGTCGCCGAGTGGAAACAAGCGCACCCGCAGGGCGCCTATGTCTGGAACGAGCAGCAATTGCAGGCAG CGTCCGGTGCACCTGCGCTGCTGGGGCTGTTCGAACCGGACCACATGCAGTTCGATCACGACCGCAACCGCACCCCGCAG GGCGAGCCCAGCCTGACCGAGATGACCCGCACCGCGATCCAGTCGCTGTCGCGCGAGCCGAATGGGTTCGTACTGATGGT CGAAGGCGGCCGCATCGATCACGCCAACCACGCCGGCAACGCCTACCGCGCGCTCGATGAAACCGTGTCGCTGTCCGATG CCGTGCGCGTTGCTGTGCAGACTGCGCCACCGGACACGCTGATCATCGTCACCGCCGACCATTCGCACACGCTCAACTTC GTCGGCTACCCGGTGCGCGGTAACCCGATCCTGGGCAAGGTGCGCGGCACCGGCGGCGAAGAAGGCGACCGCAGCCAGCT GGCCACCGACCTGGCCGGCCAGCCGTACACCACGCTCAGCTACGCCAACGGCCCCGGCTATACAGGTGCCAGCAACGCGC AGCCGGCCGGTCCGAAGAAGTATCCGCACGAACCCAGCAGCAGCGAGCCGGCCACTGGCCGCCCGGACCTGAGCCATGTC GACACCGAAGCCCCCAGCTACATGCAGGAAGCGCTGGTGCCGACCAAATCCGAAAGCCACGGCGGCGAAGATGTCGGCAT CTGGGCCACCGGCCCCGGCAGCGCGGCATTCCGCGGCACGCTGGAAGAGAACGTGATCTACCACGTCATCGTCCAGGCCA CTCCGCGCCTGCGCGAGCGCCTGTGCAAGGCCGGCACCTGCAATGCCGCTGGTGTGCCGGTGGAATTGCCCAAGCCGGCC ACGTTCGAGGCTGCGGTCAAGCGCTGA
Upstream 100 bases:
>100_bases GGGCTGCCCTGCTCGCGAGACCACAGCTGGAACAGCGCTGTGTCATCGGTGTGACACCACCCAGCGCGGCATAATGGGGA TTGATTCAGTCACGAGTTCG
Downstream 100 bases:
>100_bases TGCGCAGGCGGCGCTGCAGCGATGGCGGGCGAGCCGGCGCATGATGCGGTCGACGCATCGCCGCTCGACCTGCCTGCCTG GCGTCGCCAATGCCGTGTGC
Product: alkaline phosphatase
Products: NA
Alternate protein names: High molecular weight phosphatase; H-AP [H]
Number of amino acids: Translated: 568; Mature: 567
Protein sequence:
>568_residues MPMRYRLPTLAALTTLCVAACASTTGSGTSAPASVRVEVPPVTHPAGETPQWWYRSGAARAAGNGAMAGKARNVILFLGD GMSLTTVAAARILDGQRKGGPGEENLLSWEQFPATAFSKTYNTDSQTPDSAGTMTSITTGVKSHMGAIGVSSGNRSDCAD SLNKGLLSWLQLADSAGMATGIVTTTRLTHATPAATYAHSPDRNWENDTDLPESARAAGCQDIAQQLLSTARYGRGPQVV LGGGRSQFQSVQERDPEYDDKVGLRLDGRDLVAEWKQAHPQGAYVWNEQQLQAASGAPALLGLFEPDHMQFDHDRNRTPQ GEPSLTEMTRTAIQSLSREPNGFVLMVEGGRIDHANHAGNAYRALDETVSLSDAVRVAVQTAPPDTLIIVTADHSHTLNF VGYPVRGNPILGKVRGTGGEEGDRSQLATDLAGQPYTTLSYANGPGYTGASNAQPAGPKKYPHEPSSSEPATGRPDLSHV DTEAPSYMQEALVPTKSESHGGEDVGIWATGPGSAAFRGTLEENVIYHVIVQATPRLRERLCKAGTCNAAGVPVELPKPA TFEAAVKR
Sequences:
>Translated_568_residues MPMRYRLPTLAALTTLCVAACASTTGSGTSAPASVRVEVPPVTHPAGETPQWWYRSGAARAAGNGAMAGKARNVILFLGD GMSLTTVAAARILDGQRKGGPGEENLLSWEQFPATAFSKTYNTDSQTPDSAGTMTSITTGVKSHMGAIGVSSGNRSDCAD SLNKGLLSWLQLADSAGMATGIVTTTRLTHATPAATYAHSPDRNWENDTDLPESARAAGCQDIAQQLLSTARYGRGPQVV LGGGRSQFQSVQERDPEYDDKVGLRLDGRDLVAEWKQAHPQGAYVWNEQQLQAASGAPALLGLFEPDHMQFDHDRNRTPQ GEPSLTEMTRTAIQSLSREPNGFVLMVEGGRIDHANHAGNAYRALDETVSLSDAVRVAVQTAPPDTLIIVTADHSHTLNF VGYPVRGNPILGKVRGTGGEEGDRSQLATDLAGQPYTTLSYANGPGYTGASNAQPAGPKKYPHEPSSSEPATGRPDLSHV DTEAPSYMQEALVPTKSESHGGEDVGIWATGPGSAAFRGTLEENVIYHVIVQATPRLRERLCKAGTCNAAGVPVELPKPA TFEAAVKR >Mature_567_residues PMRYRLPTLAALTTLCVAACASTTGSGTSAPASVRVEVPPVTHPAGETPQWWYRSGAARAAGNGAMAGKARNVILFLGDG MSLTTVAAARILDGQRKGGPGEENLLSWEQFPATAFSKTYNTDSQTPDSAGTMTSITTGVKSHMGAIGVSSGNRSDCADS LNKGLLSWLQLADSAGMATGIVTTTRLTHATPAATYAHSPDRNWENDTDLPESARAAGCQDIAQQLLSTARYGRGPQVVL GGGRSQFQSVQERDPEYDDKVGLRLDGRDLVAEWKQAHPQGAYVWNEQQLQAASGAPALLGLFEPDHMQFDHDRNRTPQG EPSLTEMTRTAIQSLSREPNGFVLMVEGGRIDHANHAGNAYRALDETVSLSDAVRVAVQTAPPDTLIIVTADHSHTLNFV GYPVRGNPILGKVRGTGGEEGDRSQLATDLAGQPYTTLSYANGPGYTGASNAQPAGPKKYPHEPSSSEPATGRPDLSHVD TEAPSYMQEALVPTKSESHGGEDVGIWATGPGSAAFRGTLEENVIYHVIVQATPRLRERLCKAGTCNAAGVPVELPKPAT FEAAVKR
Specific function: Has only a phosphomonoesterase activity [H]
COG id: COG1785
COG function: function code P; Alkaline phosphatase
Gene ontology:
Cell location: Secreted. Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the alkaline phosphatase family [H]
Homologues:
Organism=Homo sapiens, GI157266296, Length=520, Percent_Identity=41.7307692307692, Blast_Score=366, Evalue=1e-101, Organism=Homo sapiens, GI94721246, Length=520, Percent_Identity=41.9230769230769, Blast_Score=366, Evalue=1e-101, Organism=Homo sapiens, GI157266292, Length=497, Percent_Identity=41.851106639839, Blast_Score=360, Evalue=2e-99, Organism=Homo sapiens, GI116734717, Length=473, Percent_Identity=42.2832980972516, Blast_Score=352, Evalue=5e-97, Organism=Homo sapiens, GI294660770, Length=468, Percent_Identity=41.8803418803419, Blast_Score=343, Evalue=2e-94, Organism=Homo sapiens, GI294660772, Length=436, Percent_Identity=39.4495412844037, Blast_Score=297, Evalue=2e-80, Organism=Escherichia coli, GI48994877, Length=362, Percent_Identity=32.0441988950276, Blast_Score=116, Evalue=4e-27, Organism=Saccharomyces cerevisiae, GI6320689, Length=355, Percent_Identity=31.830985915493, Blast_Score=129, Evalue=1e-30, Organism=Drosophila melanogaster, GI21355149, Length=486, Percent_Identity=40.5349794238683, Blast_Score=313, Evalue=2e-85, Organism=Drosophila melanogaster, GI21355151, Length=473, Percent_Identity=42.4947145877378, Blast_Score=312, Evalue=5e-85, Organism=Drosophila melanogaster, GI24651554, Length=519, Percent_Identity=39.8843930635838, Blast_Score=306, Evalue=2e-83, Organism=Drosophila melanogaster, GI21358067, Length=469, Percent_Identity=41.5778251599147, Blast_Score=303, Evalue=3e-82, Organism=Drosophila melanogaster, GI85725200, Length=487, Percent_Identity=40.041067761807, Blast_Score=302, Evalue=5e-82, Organism=Drosophila melanogaster, GI85815833, Length=487, Percent_Identity=40.041067761807, Blast_Score=302, Evalue=5e-82, Organism=Drosophila melanogaster, GI24657835, Length=514, Percent_Identity=38.3268482490272, Blast_Score=301, Evalue=7e-82, Organism=Drosophila melanogaster, GI19921912, Length=539, Percent_Identity=38.0333951762523, Blast_Score=297, Evalue=2e-80, Organism=Drosophila melanogaster, GI24585213, Length=544, Percent_Identity=37.5, Blast_Score=289, Evalue=4e-78, Organism=Drosophila melanogaster, GI21355981, Length=472, Percent_Identity=39.1949152542373, Blast_Score=288, Evalue=7e-78, Organism=Drosophila melanogaster, GI24657842, Length=513, Percent_Identity=38.401559454191, Blast_Score=285, Evalue=7e-77, Organism=Drosophila melanogaster, GI24651556, Length=476, Percent_Identity=40.7563025210084, Blast_Score=284, Evalue=1e-76, Organism=Drosophila melanogaster, GI24657827, Length=502, Percent_Identity=40.2390438247012, Blast_Score=282, Evalue=5e-76, Organism=Drosophila melanogaster, GI18859923, Length=487, Percent_Identity=37.9876796714579, Blast_Score=279, Evalue=3e-75, Organism=Drosophila melanogaster, GI24645593, Length=298, Percent_Identity=27.8523489932886, Blast_Score=80, Evalue=5e-15,
Paralogues:
None
Copy number: 340 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017849 - InterPro: IPR001952 - InterPro: IPR018299 - InterPro: IPR017850 [H]
Pfam domain/function: PF00245 Alk_phosphatase [H]
EC number: =3.1.3.1 [H]
Molecular weight: Translated: 60088; Mature: 59957
Theoretical pI: Translated: 6.12; Mature: 6.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPMRYRLPTLAALTTLCVAACASTTGSGTSAPASVRVEVPPVTHPAGETPQWWYRSGAAR CCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHCCCCC AAGNGAMAGKARNVILFLGDGMSLTTVAAARILDGQRKGGPGEENLLSWEQFPATAFSKT CCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHCCCCCCCCCHHHCCCHHHCCCHHHHHC YNTDSQTPDSAGTMTSITTGVKSHMGAIGVSSGNRSDCADSLNKGLLSWLQLADSAGMAT CCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCEE GIVTTTRLTHATPAATYAHSPDRNWENDTDLPESARAAGCQDIAQQLLSTARYGRGPQVV EEEEEEEECCCCCCHHCCCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHCCCCCEEE LGGGRSQFQSVQERDPEYDDKVGLRLDGRDLVAEWKQAHPQGAYVWNEQQLQAASGAPAL ECCCHHHHHHHHHCCCCCCCCCCEEECCHHHHHHHHHCCCCCCEEECHHHHHHCCCCCCE LGLFEPDHMQFDHDRNRTPQGEPSLTEMTRTAIQSLSREPNGFVLMVEGGRIDHANHAGN EEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCH AYRALDETVSLSDAVRVAVQTAPPDTLIIVTADHSHTLNFVGYPVRGNPILGKVRGTGGE HHHHHHHHHHHCHHEEEEEEECCCCEEEEEECCCCCEEEEEEECCCCCCEEEEEECCCCC EGDRSQLATDLAGQPYTTLSYANGPGYTGASNAQPAGPKKYPHEPSSSEPATGRPDLSHV CCCHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC DTEAPSYMQEALVPTKSESHGGEDVGIWATGPGSAAFRGTLEENVIYHVIVQATPRLRER CCCCHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCCHHCCEEEEEEECCCHHHHHH LCKAGTCNAAGVPVELPKPATFEAAVKR HHCCCCCCCCCCCEECCCCCCHHHHHCC >Mature Secondary Structure PMRYRLPTLAALTTLCVAACASTTGSGTSAPASVRVEVPPVTHPAGETPQWWYRSGAAR CCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHCCCCC AAGNGAMAGKARNVILFLGDGMSLTTVAAARILDGQRKGGPGEENLLSWEQFPATAFSKT CCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHCCCCCCCCCHHHCCCHHHCCCHHHHHC YNTDSQTPDSAGTMTSITTGVKSHMGAIGVSSGNRSDCADSLNKGLLSWLQLADSAGMAT CCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCEE GIVTTTRLTHATPAATYAHSPDRNWENDTDLPESARAAGCQDIAQQLLSTARYGRGPQVV EEEEEEEECCCCCCHHCCCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHCCCCCEEE LGGGRSQFQSVQERDPEYDDKVGLRLDGRDLVAEWKQAHPQGAYVWNEQQLQAASGAPAL ECCCHHHHHHHHHCCCCCCCCCCEEECCHHHHHHHHHCCCCCCEEECHHHHHHCCCCCCE LGLFEPDHMQFDHDRNRTPQGEPSLTEMTRTAIQSLSREPNGFVLMVEGGRIDHANHAGN EEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCH AYRALDETVSLSDAVRVAVQTAPPDTLIIVTADHSHTLNFVGYPVRGNPILGKVRGTGGE HHHHHHHHHHHCHHEEEEEEECCCCEEEEEECCCCCEEEEEEECCCCCCEEEEEECCCCC EGDRSQLATDLAGQPYTTLSYANGPGYTGASNAQPAGPKKYPHEPSSSEPATGRPDLSHV CCCHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC DTEAPSYMQEALVPTKSESHGGEDVGIWATGPGSAAFRGTLEENVIYHVIVQATPRLRER CCCCHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCCHHCCEEEEEEECCCHHHHHH LCKAGTCNAAGVPVELPKPATFEAAVKR HHCCCCCCCCCCCEECCCCCCHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10984043; 8454193 [H]