| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is yehV [C]
Identifier: 21243318
GI number: 21243318
Start: 3048046
End: 3048402
Strand: Reverse
Name: yehV [C]
Synonym: XAC2587
Alternate gene names: 21243318
Gene position: 3048402-3048046 (Counterclockwise)
Preceding gene: 21243319
Following gene: 21243317
Centisome position: 58.9
GC content: 62.18
Gene sequence:
>357_bases ATGCTGGATCCGGGCAGTAATCGCGAGCTACCGCCGATCCCGGCCAAGCGCTATTTCACCATTGGTGAGGTGAGCGAGCT ATGCGACGTCAAGCCGCATGTGCTGCGCTATTGGGAAACCGAGTTTCCCAGCCTGGAGCCGGTCAAGCGGCGCGGGAACC GGCGCTACTACCAGCGCCATGACGTGCTGATGGTGCGTCAGATCCGCGGGCTGCTGTACGAGCAGGGCTATACCATCGGT GGTGCGCGCTTGCGTCTGGAAGGCGAAGGCGCCAAGAGCGAGTCGGCGCTGAGCAATCAGATCATCAAGCAGGTGCGGAT GGAGCTGGAAGAAGTCCTGCAACTGCTGCGCCGCTAG
Upstream 100 bases:
>100_bases CCCGGTCGCAATCCCAAGACTGGCGAAGAAATTCCGATCTCGGCACGGACGGTCGTGACGTTCCGCCCTGGCCAAAAACT CAAGGAACGGGTGGAGGCTT
Downstream 100 bases:
>100_bases GAAAACGTTTCACAAAGCCGCTATAATCGCAGGCCGCCTCGCGGCGGAACGCGGCATCTTCGGGGTATAGCGCAGCCTGG TAGCGCACTAGTCTGGGGGA
Product: hypothetical protein
Products: NA
Alternate protein names: Transcriptional Regulator MerR Family; Transcriptional Regulator; Transcriptional Regulator MerR Family Protein; Transcription Regulator Protein; Regulatory Protein MerR; Transcriptional Regulator Merr Family; MerR-Family Transcriptional Regulator; Trancriptional Regulator MerR Family; Transcriptional Regulator Protein; MerR Family Regulatory Protein; Transcriptional Regulator MerR; TRANSCRIPTIONal REGULATOR MerR Family; Transcriptional Regulatory Protein; Regulatory Protein Merr; MerR Family Regulatory Family; Transcriptional Regulator Protein MerR Family; Bacterial Transferase Hexapeptide Repeat Protein; Transcriptional Regulator Domain-Containing Protein; MerR Protein
Number of amino acids: Translated: 118; Mature: 118
Protein sequence:
>118_residues MLDPGSNRELPPIPAKRYFTIGEVSELCDVKPHVLRYWETEFPSLEPVKRRGNRRYYQRHDVLMVRQIRGLLYEQGYTIG GARLRLEGEGAKSESALSNQIIKQVRMELEEVLQLLRR
Sequences:
>Translated_118_residues MLDPGSNRELPPIPAKRYFTIGEVSELCDVKPHVLRYWETEFPSLEPVKRRGNRRYYQRHDVLMVRQIRGLLYEQGYTIG GARLRLEGEGAKSESALSNQIIKQVRMELEEVLQLLRR >Mature_118_residues MLDPGSNRELPPIPAKRYFTIGEVSELCDVKPHVLRYWETEFPSLEPVKRRGNRRYYQRHDVLMVRQIRGLLYEQGYTIG GARLRLEGEGAKSESALSNQIIKQVRMELEEVLQLLRR
Specific function: Unknown
COG id: COG0789
COG function: function code K; Predicted transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13840; Mature: 13840
Theoretical pI: Translated: 9.71; Mature: 9.71
Prosite motif: PS50937 HTH_MERR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLDPGSNRELPPIPAKRYFTIGEVSELCDVKPHVLRYWETEFPSLEPVKRRGNRRYYQRH CCCCCCCCCCCCCCCCCEECHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHCCCCCHHHHH DVLMVRQIRGLLYEQGYTIGGARLRLEGEGAKSESALSNQIIKQVRMELEEVLQLLRR HHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure MLDPGSNRELPPIPAKRYFTIGEVSELCDVKPHVLRYWETEFPSLEPVKRRGNRRYYQRH CCCCCCCCCCCCCCCCCEECHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHCCCCCHHHHH DVLMVRQIRGLLYEQGYTIGGARLRLEGEGAKSESALSNQIIKQVRMELEEVLQLLRR HHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA