| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is yaeQ [H]
Identifier: 21243130
GI number: 21243130
Start: 2791293
End: 2791841
Strand: Direct
Name: yaeQ [H]
Synonym: XAC2396
Alternate gene names: 21243130
Gene position: 2791293-2791841 (Clockwise)
Preceding gene: 21243127
Following gene: 21243131
Centisome position: 53.93
GC content: 65.94
Gene sequence:
>549_bases ATGGCCCTCACCGCCACCGTCCGCAGGGCGGAACTTCAGATCAGCGACATGGACCGCGGCTATTACGCCAACCATTCGCT GACCCTGGCCCAGCACCCTTCCGAGACCGACGAGCGCCTGATGGTGCGGCTGCTGGCGTTCGCGCTGTTTGCCGACGACC GTCTGGAATTCGGCCGTGGCCTGAGTAACGACGACGAGCCGGACCTATGGCGCCGCGACTACACCGGCGATCCGGATCTG TGGATCGACCTCGGCCAGCCTGACGAAAGCCGCGTGCGCAAGGCCTGCAATCGCTCGCGCGAGGCGGTAGTGATCGGCTA CGGCGGCCAGGCCACCGAAACCTGGTGGAAGAAACACGCCAACGCCATGGGCCGGTACCGCAATCTGCGCGTGATCGAGC TCGACTCGCAGGCCACCGAAGCGCTTGGCGCACTGATCCAGCGCGGCATGCGTTTCGACGTGATCATTCAGGACGGCGAA GTGCAGATGCTGGCCGACCACGGCAGCGTCACCCTGACCCCGATGGTGCGGCAAGCCCCGGCCGAATGA
Upstream 100 bases:
>100_bases CGGCCCAGACACGGCCGACGACGCACCCCCGCCAGACACGGCGACACCCGGCGCATGAACCGGGCGCGTATCATGAGCGC CCTTTGCAACCGGCATCCAG
Downstream 100 bases:
>100_bases GCATGCGTTGCGACGTGCTGGTCATCGGCGCCGGCGCTGCCGGACTGATGAGCGCCCTTACTGCCGGCCAGCGCGGCCGC AAGGTGCTGGTGATCGATCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 182; Mature: 181
Protein sequence:
>182_residues MALTATVRRAELQISDMDRGYYANHSLTLAQHPSETDERLMVRLLAFALFADDRLEFGRGLSNDDEPDLWRRDYTGDPDL WIDLGQPDESRVRKACNRSREAVVIGYGGQATETWWKKHANAMGRYRNLRVIELDSQATEALGALIQRGMRFDVIIQDGE VQMLADHGSVTLTPMVRQAPAE
Sequences:
>Translated_182_residues MALTATVRRAELQISDMDRGYYANHSLTLAQHPSETDERLMVRLLAFALFADDRLEFGRGLSNDDEPDLWRRDYTGDPDL WIDLGQPDESRVRKACNRSREAVVIGYGGQATETWWKKHANAMGRYRNLRVIELDSQATEALGALIQRGMRFDVIIQDGE VQMLADHGSVTLTPMVRQAPAE >Mature_181_residues ALTATVRRAELQISDMDRGYYANHSLTLAQHPSETDERLMVRLLAFALFADDRLEFGRGLSNDDEPDLWRRDYTGDPDLW IDLGQPDESRVRKACNRSREAVVIGYGGQATETWWKKHANAMGRYRNLRVIELDSQATEALGALIQRGMRFDVIIQDGEV QMLADHGSVTLTPMVRQAPAE
Specific function: Unknown
COG id: COG4681
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1786388, Length=181, Percent_Identity=40.3314917127072, Blast_Score=155, Evalue=1e-39,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009822 [H]
Pfam domain/function: PF07152 YaeQ [H]
EC number: NA
Molecular weight: Translated: 20635; Mature: 20504
Theoretical pI: Translated: 4.92; Mature: 4.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALTATVRRAELQISDMDRGYYANHSLTLAQHPSETDERLMVRLLAFALFADDRLEFGRG CCCCCCEEEEEEEEECCCCCEECCCEEEEECCCCCHHHHHHHHHHHHHHHHCCHHHHCCC LSNDDEPDLWRRDYTGDPDLWIDLGQPDESRVRKACNRSREAVVIGYGGQATETWWKKHA CCCCCCCCCHHCCCCCCCCEEEECCCCCHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHH NAMGRYRNLRVIELDSQATEALGALIQRGMRFDVIIQDGEVQMLADHGSVTLTPMVRQAP HHHHHHCCEEEEEECCHHHHHHHHHHHCCCEEEEEEECCCEEEEECCCCEEEEHHHHCCC AE CC >Mature Secondary Structure ALTATVRRAELQISDMDRGYYANHSLTLAQHPSETDERLMVRLLAFALFADDRLEFGRG CCCCCEEEEEEEEECCCCCEECCCEEEEECCCCCHHHHHHHHHHHHHHHHCCHHHHCCC LSNDDEPDLWRRDYTGDPDLWIDLGQPDESRVRKACNRSREAVVIGYGGQATETWWKKHA CCCCCCCCCHHCCCCCCCCEEEECCCCCHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHH NAMGRYRNLRVIELDSQATEALGALIQRGMRFDVIIQDGEVQMLADHGSVTLTPMVRQAP HHHHHHCCEEEEEECCHHHHHHHHHHHCCCEEEEEEECCCEEEEECCCCEEEEHHHHCCC AE CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]