| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21243127
Identifier: 21243127
GI number: 21243127
Start: 2788478
End: 2789593
Strand: Direct
Name: 21243127
Synonym: XAC2393
Alternate gene names: NA
Gene position: 2788478-2789593 (Clockwise)
Preceding gene: 21243124
Following gene: 21243130
Centisome position: 53.88
GC content: 65.77
Gene sequence:
>1116_bases ATGGGCGATACCGCATCCGGCGCTGCCCGCGCACCGTATCTTCACTCGATTGGCGTGTGCCGAGCGGGCTCGTCCTGCAC ATGCTTGCGACGTGCGATAGCCGCTAATAGCCGCCGGCTGCGGATCGGATGCGAACCAGATAGCGGCGAACGTTGCCGGC TCGCCACAGTCTCGTCTGCACTTGCCAGCCTGTTGCGTCCGTACCTGATACCCCTTCCCGCCCACCTAACGATATTGCCC ATGCCCTCGCGCGCTTCCCGCTGGTTCCGTCCTGCCATCCTGTTGCTCGGTTCGTTGACCATGACGGCCTGCAGCAGCGT CTTCTTTGGGGGCATCAATGCTGCATCCGGCCGATCGGGCATCGTCGAGCATCGCGACCAGGTGTTCGATCCCGCACACG GCCTGGCGCTGGATGTCTACCAGCCGCGCGGTGCAGTCGACGCGCCAATGGTGGTGTTCTTCTACGGCGGCACCTGGAAG CGCGGTTCACGCGCCAACTATCGCTGGGTGGGCCGCGCACTTGCGCGCCAGGGCGTGGTGGCGATGGTGGCCGATTACCG CAAGTATCCGCAGGTCGGGTTGCATGGGTTCATGTCCGACGCGGCGGGCGCCACCGTTTGGAGCTACCGCCATGCGCACG AGTACGGCGGCAACCCGAACCGGCTCGCGGTAATGGGCCATTCGGCAGGCGCGCATATGGCCGCGTTGCTTGGCACCGAT GCCCGCTGGCTGCAGGCGCAGGGCCTCAAACCCCACCAGCTGTGCGGCGTGGTGGGCCTGGCCGGGCCATACGACTTCAT GCCGATGACCGATCCCGAATTGGTCGAAATCTTCGGCGATGCGCCGGCAGCGCAACGGCAATCGCAACCGGTGCGCTACG TCGGCGGCGACGAACCGCCCATGTTGCTGCTGCATGGCGATGCCGACTGCGTGGTCGAACTACAAAACAGCATCTCGCTG CAGCAGGCGCTCAAGCGCGAAGGCGGCAGCGCCGAACTGAAGGTCTACCCGGGCATGGGCCATCTCGGCATCCTGCTGGC GCTGCGCAAATCTCCCGAGCGCTCGCAGGTGCTGAGCGATACGCTGCAGTTCGTGCGGCAGTGCCGGGCGCCTTGA
Upstream 100 bases:
>100_bases GAACCCTCTTCCGGGTCGCCAGGCAGCTGTTGACGCAGACGATTATCGAAGCGCAGGTGTGTCATGCCGGCAAGCCTAGG CCACCGGCGGTGAACCTGGC
Downstream 100 bases:
>100_bases GCCGCAATCCGCCCTGACGTGTTTGAGTGCCTGCTGCGAACGACTGGCTCCCTGCTCCCCAAAGCCATCATTTGGCCGGC TTGCTTCCCATCAGTTCGAA
Product: carboxylesterase
Products: NA
Alternate protein names: Alpha/Beta Hydrolase Fold-3 Domain Protein; Alpha/Beta Hydrolase Domain-Containing Protein; Lipase; Lipase/Esterase; Esterase/Lipase/Thioesterase Family Protein; Esterase/Lipase; Carboxylesterase Family Protein; Alpha/Beta Hydrolase Fold-3 Domain-Containing Protein; Esterase/Lipase-Like Protein; Alpha/Beta Hydrolase; N-Acetylanthranilate Amidase; Esterase/Lipase/Thioesterase; Carboxylesterase; Carboxylesterase Type B; Peptidase; Hydrolase; Para-Nitrobenzyl Esterase; Alpha/Beta Hydrolase Fold Domain Protein; Membrane-Bound Esterase LipM; Pectinesterase; Esterase/Lipase-Like; Alpha/Beta Hydrolase Fold; Alpha/Beta Hydrolase Fold Family Protein; Dienelactone Hydrolase; Alpha/Beta Hydrolase Family Protein; Conserved Domain Protein; Aylformamidase; Esterase LipC; Prolyl Oligopeptidase Family Protein; Alpha/Beta Hydrolase Protein; Lipase Active Site; Peptidase S; Esterase LipM
Number of amino acids: Translated: 371; Mature: 370
Protein sequence:
>371_residues MGDTASGAARAPYLHSIGVCRAGSSCTCLRRAIAANSRRLRIGCEPDSGERCRLATVSSALASLLRPYLIPLPAHLTILP MPSRASRWFRPAILLLGSLTMTACSSVFFGGINAASGRSGIVEHRDQVFDPAHGLALDVYQPRGAVDAPMVVFFYGGTWK RGSRANYRWVGRALARQGVVAMVADYRKYPQVGLHGFMSDAAGATVWSYRHAHEYGGNPNRLAVMGHSAGAHMAALLGTD ARWLQAQGLKPHQLCGVVGLAGPYDFMPMTDPELVEIFGDAPAAQRQSQPVRYVGGDEPPMLLLHGDADCVVELQNSISL QQALKREGGSAELKVYPGMGHLGILLALRKSPERSQVLSDTLQFVRQCRAP
Sequences:
>Translated_371_residues MGDTASGAARAPYLHSIGVCRAGSSCTCLRRAIAANSRRLRIGCEPDSGERCRLATVSSALASLLRPYLIPLPAHLTILP MPSRASRWFRPAILLLGSLTMTACSSVFFGGINAASGRSGIVEHRDQVFDPAHGLALDVYQPRGAVDAPMVVFFYGGTWK RGSRANYRWVGRALARQGVVAMVADYRKYPQVGLHGFMSDAAGATVWSYRHAHEYGGNPNRLAVMGHSAGAHMAALLGTD ARWLQAQGLKPHQLCGVVGLAGPYDFMPMTDPELVEIFGDAPAAQRQSQPVRYVGGDEPPMLLLHGDADCVVELQNSISL QQALKREGGSAELKVYPGMGHLGILLALRKSPERSQVLSDTLQFVRQCRAP >Mature_370_residues GDTASGAARAPYLHSIGVCRAGSSCTCLRRAIAANSRRLRIGCEPDSGERCRLATVSSALASLLRPYLIPLPAHLTILPM PSRASRWFRPAILLLGSLTMTACSSVFFGGINAASGRSGIVEHRDQVFDPAHGLALDVYQPRGAVDAPMVVFFYGGTWKR GSRANYRWVGRALARQGVVAMVADYRKYPQVGLHGFMSDAAGATVWSYRHAHEYGGNPNRLAVMGHSAGAHMAALLGTDA RWLQAQGLKPHQLCGVVGLAGPYDFMPMTDPELVEIFGDAPAAQRQSQPVRYVGGDEPPMLLLHGDADCVVELQNSISLQ QALKREGGSAELKVYPGMGHLGILLALRKSPERSQVLSDTLQFVRQCRAP
Specific function: Unknown
COG id: COG0657
COG function: function code I; Esterase/lipase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39928; Mature: 39797
Theoretical pI: Translated: 9.39; Mature: 9.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGDTASGAARAPYLHSIGVCRAGSSCTCLRRAIAANSRRLRIGCEPDSGERCRLATVSSA CCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHCCCCEEEEECCCCCCCEEEHHHHHHH LASLLRPYLIPLPAHLTILPMPSRASRWFRPAILLLGSLTMTACSSVFFGGINAASGRSG HHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC IVEHRDQVFDPAHGLALDVYQPRGAVDAPMVVFFYGGTWKRGSRANYRWVGRALARQGVV HHHHHHHHCCCCCCCEEEEECCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHCCHH AMVADYRKYPQVGLHGFMSDAAGATVWSYRHAHEYGGNPNRLAVMGHSAGAHMAALLGTD HHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHCCC ARWLQAQGLKPHQLCGVVGLAGPYDFMPMTDPELVEIFGDAPAAQRQSQPVRYVGGDEPP HHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCCCCHHHCCCCEEECCCCCCC MLLLHGDADCVVELQNSISLQQALKREGGSAELKVYPGMGHLGILLALRKSPERSQVLSD EEEEECCCCEEEEEHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHCCCCHHHHHHH TLQFVRQCRAP HHHHHHHHCCC >Mature Secondary Structure GDTASGAARAPYLHSIGVCRAGSSCTCLRRAIAANSRRLRIGCEPDSGERCRLATVSSA CCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHCCCCEEEEECCCCCCCEEEHHHHHHH LASLLRPYLIPLPAHLTILPMPSRASRWFRPAILLLGSLTMTACSSVFFGGINAASGRSG HHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC IVEHRDQVFDPAHGLALDVYQPRGAVDAPMVVFFYGGTWKRGSRANYRWVGRALARQGVV HHHHHHHHCCCCCCCEEEEECCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHCCHH AMVADYRKYPQVGLHGFMSDAAGATVWSYRHAHEYGGNPNRLAVMGHSAGAHMAALLGTD HHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHCCC ARWLQAQGLKPHQLCGVVGLAGPYDFMPMTDPELVEIFGDAPAAQRQSQPVRYVGGDEPP HHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCCCCHHHCCCCEEECCCCCCC MLLLHGDADCVVELQNSISLQQALKREGGSAELKVYPGMGHLGILLALRKSPERSQVLSD EEEEECCCCEEEEEHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHCCCCHHHHHHH TLQFVRQCRAP HHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA