| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21242897
Identifier: 21242897
GI number: 21242897
Start: 2532674
End: 2533030
Strand: Reverse
Name: 21242897
Synonym: XAC2162
Alternate gene names: NA
Gene position: 2533030-2532674 (Counterclockwise)
Preceding gene: 77748632
Following gene: 21242896
Centisome position: 48.94
GC content: 68.63
Gene sequence:
>357_bases TTGGCCGACTTCATCGTGTTGTCCGACGATTACTTCCGCATCGACGACGCGGCCATCTCCGACATCACCAGCGTGCTGAC CGTCCTGGGCGGGCGTGTCGTGCATGGCGAGGGCGACTTTGCCGCGCTCGCCCCCACGCTGCCGCCTGCCATGCCGGATT GGTCGCCGGTGAATCGGTTCGGCGGCTACCAGGTTGGAGGCGGGATGAGCGGGCTAGCCGCTGCGCCGCACGCGCATGCG CGCGGCCACGCGTGTCGAGCCCACGGCGCGCACGCGCATGCGGGGCTGCATGCTGTCCCCACCGATGATCTACGTCGCTT CTGGGGTGCCTTGGGATGCGCGTGCTTCGCGTTCTGA
Upstream 100 bases:
>100_bases AGAATCTGCTCGATCGCGAACAGGCACTGCGGTTGTGGACGCAGGGCAGCGCCTGGTTTTCCGGTGACGAGACCAACAAG GGCACCCTGGCGGCGGGCAG
Downstream 100 bases:
>100_bases TGGCGGTATCGCCGGTACATCTTCGTGCCTGCATGTTGCACGCGGCACACTTCTGCGTCGTTTGTTTCATCCCATTGGCT GGAGTCTTGCCGCGATGAGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 118; Mature: 117
Protein sequence:
>118_residues MADFIVLSDDYFRIDDAAISDITSVLTVLGGRVVHGEGDFAALAPTLPPAMPDWSPVNRFGGYQVGGGMSGLAAAPHAHA RGHACRAHGAHAHAGLHAVPTDDLRRFWGALGCACFAF
Sequences:
>Translated_118_residues MADFIVLSDDYFRIDDAAISDITSVLTVLGGRVVHGEGDFAALAPTLPPAMPDWSPVNRFGGYQVGGGMSGLAAAPHAHA RGHACRAHGAHAHAGLHAVPTDDLRRFWGALGCACFAF >Mature_117_residues ADFIVLSDDYFRIDDAAISDITSVLTVLGGRVVHGEGDFAALAPTLPPAMPDWSPVNRFGGYQVGGGMSGLAAAPHAHAR GHACRAHGAHAHAGLHAVPTDDLRRFWGALGCACFAF
Specific function: Unknown
COG id: COG1574
COG function: function code R; Predicted metal-dependent hydrolase with the TIM-barrel fold
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12295; Mature: 12164
Theoretical pI: Translated: 6.50; Mature: 6.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADFIVLSDDYFRIDDAAISDITSVLTVLGGRVVHGEGDFAALAPTLPPAMPDWSPVNRF CCCEEEECCCCEEECHHHHHHHHHHHHHHCCEEEECCCCEEEECCCCCCCCCCCCCHHHC GGYQVGGGMSGLAAAPHAHARGHACRAHGAHAHAGLHAVPTDDLRRFWGALGCACFAF CCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCC >Mature Secondary Structure ADFIVLSDDYFRIDDAAISDITSVLTVLGGRVVHGEGDFAALAPTLPPAMPDWSPVNRF CCEEEECCCCEEECHHHHHHHHHHHHHHCCEEEECCCCEEEECCCCCCCCCCCCCHHHC GGYQVGGGMSGLAAAPHAHARGHACRAHGAHAHAGLHAVPTDDLRRFWGALGCACFAF CCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA