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The map label for this gene is tetV [H]

Identifier: 21242896

GI number: 21242896

Start: 2530951

End: 2532579

Strand: Reverse

Name: tetV [H]

Synonym: XAC2161

Alternate gene names: 21242896

Gene position: 2532579-2530951 (Counterclockwise)

Preceding gene: 21242897

Following gene: 21242895

Centisome position: 48.93

GC content: 66.67

Gene sequence:

>1629_bases
ATGAGTGTTTCTGCCGCACCTGCCGAAGGTGGTGCCTGGGCGCCGCTGCGTGAGCCGGTTTTCCGCGCCTTGTGGCTGGC
GATCCTGGGCAGCAATATCGGTACCTGGATCAATGATGTCGCCGCGTCCTGGGTGATGGCCGAACAGACCGGCTCGCCAT
TGATGGTGGCGGCGGTACAGTCGGCGACCACCTTGCCGGTGGTGTTATTGGCACTGGTCGCCGGCACGCTGGCCGACATC
GTCGACCGTCGTCGCTACCTGCTGTTGACCCAGCTCTGGATGCTGCTGGTGGCCGGTACGCTCGCGTTATTGGCGCATCT
GCAGTTGCTGGCGCCTTGGGTCTTGGTGGCGCTCACCTTTGCAATGGGCGTGGGCGCGGCAATGGCGATGCCGGCGCAGG
CGGCGATCGTGTCGGAACTGGTGCCGAGCCCGATGCTGGCTTCGGCGGTGGCGCTCAATTCGATCGGCATGAACATCGCG
CGATCGATCGGCCCGGCCGTGGGTGGGCTGATCGTGGCGCAATTCGGCCCGCCGTGGGCCTTTCTGCTCAACGGGTTGAC
CTTTGGCATGATGCTGTACGTGCTGTGGCGGTGGCGCCGCGATGTGCACACCTCGGCGCTGCCGCCGGAGAGCTTTGGCG
CAGGCCTGCGCGCAGGGTTGCGCTACGCCGCGCGCGCCGGTCGCCTGCAGGCGGTGCTGATCAAGGCCGCCGGCTTTTTT
GTGTTCGCCAGCGCGTTGACCGCGCTGCTGCCGTTGGTGGTCCGCCGCGACATGCAGCTGGGCGCCGGCAGCTACGGCGT
TTTGCTGGGCTGCATCGGCGTCGGAGCGATCAGCGGCGCCTTGCTGTTGCCGCGCCTGCGTGCGCACTACGACCGCGATC
TGTTGGTGTTCGTTGCCACCCTGGTGTGCGCTGCATCGCTGCTGGGGTTGGCGTTGTCGCGGCTGCTTGGCGTGTTGTGC
GTGGTGATGGTGGTGAACGGCCTGGCCTGGATCACGGTGCTGTCGTCGTTGCAGATCGCCGCACAGACCGCCGTCCCTGC
GTGGGTGCGTGCCCGTGCATTGTCGCTATACATCGTGGTGTTTTCCGCAGGCATGGCCAGTGGCTCGCTGTTATGGGGTG
CGTTGGCCCAACGCACGTCGATTGCCACAGCACTGCAGATCGCAGCCGCCGGTGCAGTGATCGCCGCGCTAGTGGTCAAA
CGCGCGCGGATTGCCGGAACCGAACAGCTGGACCTCGCCCCCGGTGGGCATTGGCCTGCACCTGCGCAAGTCGATCGCGT
CGAGCACGACCGCGGCCCGGTGCTGGTGACAGTGGAATACCGTATCGCTGCCGAGGCACGCGTCGCGTTCTTGCAGTTGA
TGACGCAACTGGGCAATGCGCGCCGCCGCGATGGCGCCGTGGTCTGGGGCATCGCCGAAGACGCTGCAACGCCGGGTGTG
CAACTGGAATACTTCATCCTCGCCTCCTGGCTGGAGCATTTGCGGCAGCACGAACGCGTCACCGGCGACGACCGCCAATT
ACAGGAACAGATCCGCGCCCTGCATCACGGCGAGCGCGCGCCGGTGGTGCGCCACTTCGTCGGTGGCGGCGGTGCTGCGC
TGCCGCCGCACGCGCACTCGGATATCTGA

Upstream 100 bases:

>100_bases
TTCTGATGGCGGTATCGCCGGTACATCTTCGTGCCTGCATGTTGCACGCGGCACACTTCTGCGTCGTTTGTTTCATCCCA
TTGGCTGGAGTCTTGCCGCG

Downstream 100 bases:

>100_bases
TGCCCATGAACTGGAAGTTCATCAGCGGTGTCGCGTTGGGTATGGCAATCGGCTTGGGCTGCCGCATGGCCGGCATTCCA
TCGCCTGCTCCGACGGCTCT

Product: MFS transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 542; Mature: 541

Protein sequence:

>542_residues
MSVSAAPAEGGAWAPLREPVFRALWLAILGSNIGTWINDVAASWVMAEQTGSPLMVAAVQSATTLPVVLLALVAGTLADI
VDRRRYLLLTQLWMLLVAGTLALLAHLQLLAPWVLVALTFAMGVGAAMAMPAQAAIVSELVPSPMLASAVALNSIGMNIA
RSIGPAVGGLIVAQFGPPWAFLLNGLTFGMMLYVLWRWRRDVHTSALPPESFGAGLRAGLRYAARAGRLQAVLIKAAGFF
VFASALTALLPLVVRRDMQLGAGSYGVLLGCIGVGAISGALLLPRLRAHYDRDLLVFVATLVCAASLLGLALSRLLGVLC
VVMVVNGLAWITVLSSLQIAAQTAVPAWVRARALSLYIVVFSAGMASGSLLWGALAQRTSIATALQIAAAGAVIAALVVK
RARIAGTEQLDLAPGGHWPAPAQVDRVEHDRGPVLVTVEYRIAAEARVAFLQLMTQLGNARRRDGAVVWGIAEDAATPGV
QLEYFILASWLEHLRQHERVTGDDRQLQEQIRALHHGERAPVVRHFVGGGGAALPPHAHSDI

Sequences:

>Translated_542_residues
MSVSAAPAEGGAWAPLREPVFRALWLAILGSNIGTWINDVAASWVMAEQTGSPLMVAAVQSATTLPVVLLALVAGTLADI
VDRRRYLLLTQLWMLLVAGTLALLAHLQLLAPWVLVALTFAMGVGAAMAMPAQAAIVSELVPSPMLASAVALNSIGMNIA
RSIGPAVGGLIVAQFGPPWAFLLNGLTFGMMLYVLWRWRRDVHTSALPPESFGAGLRAGLRYAARAGRLQAVLIKAAGFF
VFASALTALLPLVVRRDMQLGAGSYGVLLGCIGVGAISGALLLPRLRAHYDRDLLVFVATLVCAASLLGLALSRLLGVLC
VVMVVNGLAWITVLSSLQIAAQTAVPAWVRARALSLYIVVFSAGMASGSLLWGALAQRTSIATALQIAAAGAVIAALVVK
RARIAGTEQLDLAPGGHWPAPAQVDRVEHDRGPVLVTVEYRIAAEARVAFLQLMTQLGNARRRDGAVVWGIAEDAATPGV
QLEYFILASWLEHLRQHERVTGDDRQLQEQIRALHHGERAPVVRHFVGGGGAALPPHAHSDI
>Mature_541_residues
SVSAAPAEGGAWAPLREPVFRALWLAILGSNIGTWINDVAASWVMAEQTGSPLMVAAVQSATTLPVVLLALVAGTLADIV
DRRRYLLLTQLWMLLVAGTLALLAHLQLLAPWVLVALTFAMGVGAAMAMPAQAAIVSELVPSPMLASAVALNSIGMNIAR
SIGPAVGGLIVAQFGPPWAFLLNGLTFGMMLYVLWRWRRDVHTSALPPESFGAGLRAGLRYAARAGRLQAVLIKAAGFFV
FASALTALLPLVVRRDMQLGAGSYGVLLGCIGVGAISGALLLPRLRAHYDRDLLVFVATLVCAASLLGLALSRLLGVLCV
VMVVNGLAWITVLSSLQIAAQTAVPAWVRARALSLYIVVFSAGMASGSLLWGALAQRTSIATALQIAAAGAVIAALVVKR
ARIAGTEQLDLAPGGHWPAPAQVDRVEHDRGPVLVTVEYRIAAEARVAFLQLMTQLGNARRRDGAVVWGIAEDAATPGVQ
LEYFILASWLEHLRQHERVTGDDRQLQEQIRALHHGERAPVVRHFVGGGGAALPPHAHSDI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily. TCR/tet family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 57214; Mature: 57083

Theoretical pI: Translated: 10.21; Mature: 10.21

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVSAAPAEGGAWAPLREPVFRALWLAILGSNIGTWINDVAASWVMAEQTGSPLMVAAVQ
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCEEEEHHH
SATTLPVVLLALVAGTLADIVDRRRYLLLTQLWMLLVAGTLALLAHLQLLAPWVLVALTF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AMGVGAAMAMPAQAAIVSELVPSPMLASAVALNSIGMNIARSIGPAVGGLIVAQFGPPWA
HHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCHH
FLLNGLTFGMMLYVLWRWRRDVHTSALPPESFGAGLRAGLRYAARAGRLQAVLIKAAGFF
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCHHHHHHHHHHHHCCCHHHHHHHHHHHH
VFASALTALLPLVVRRDMQLGAGSYGVLLGCIGVGAISGALLLPRLRAHYDRDLLVFVAT
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
LVCAASLLGLALSRLLGVLCVVMVVNGLAWITVLSSLQIAAQTAVPAWVRARALSLYIVV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FSAGMASGSLLWGALAQRTSIATALQIAAAGAVIAALVVKRARIAGTEQLDLAPGGHWPA
HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCC
PAQVDRVEHDRGPVLVTVEYRIAAEARVAFLQLMTQLGNARRRDGAVVWGIAEDAATPGV
CCHHHHHHCCCCCEEEEEEEEHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEHHHCCCCCC
QLEYFILASWLEHLRQHERVTGDDRQLQEQIRALHHGERAPVVRHFVGGGGAALPPHAHS
CHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCCCC
DI
CC
>Mature Secondary Structure 
SVSAAPAEGGAWAPLREPVFRALWLAILGSNIGTWINDVAASWVMAEQTGSPLMVAAVQ
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCEEEEHHH
SATTLPVVLLALVAGTLADIVDRRRYLLLTQLWMLLVAGTLALLAHLQLLAPWVLVALTF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AMGVGAAMAMPAQAAIVSELVPSPMLASAVALNSIGMNIARSIGPAVGGLIVAQFGPPWA
HHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCHH
FLLNGLTFGMMLYVLWRWRRDVHTSALPPESFGAGLRAGLRYAARAGRLQAVLIKAAGFF
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCHHHHHHHHHHHHCCCHHHHHHHHHHHH
VFASALTALLPLVVRRDMQLGAGSYGVLLGCIGVGAISGALLLPRLRAHYDRDLLVFVAT
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
LVCAASLLGLALSRLLGVLCVVMVVNGLAWITVLSSLQIAAQTAVPAWVRARALSLYIVV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FSAGMASGSLLWGALAQRTSIATALQIAAAGAVIAALVVKRARIAGTEQLDLAPGGHWPA
HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCC
PAQVDRVEHDRGPVLVTVEYRIAAEARVAFLQLMTQLGNARRRDGAVVWGIAEDAATPGV
CCHHHHHHCCCCCEEEEEEEEHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEHHHCCCCCC
QLEYFILASWLEHLRQHERVTGDDRQLQEQIRALHHGERAPVVRHFVGGGGAALPPHAHS
CHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCCCC
DI
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8946165; 9384377 [H]