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The map label for this gene is tonB [H]

Identifier: 21242850

GI number: 21242850

Start: 2472927

End: 2473343

Strand: Reverse

Name: tonB [H]

Synonym: XAC2115

Alternate gene names: 21242850

Gene position: 2473343-2472927 (Counterclockwise)

Preceding gene: 21242851

Following gene: 21242849

Centisome position: 47.79

GC content: 69.54

Gene sequence:

>417_bases
ATGTATCGCGCTGCGCTCGCCGGTCTCATCGTCGCCACCGGCCTTGGCGGCTGCGGCAAGTCGCCACAGCAGGCCTCTGC
TCCCACCGTCGCGCCCACCGAACTGGCTGCCCTGAAGACGCCACCGCCGGAATATTCGCCGCAGCTGGCCTGCGCCGGTA
TCGGCGGCACCACCGTGCTGCGAGTCGTGGTCGGCGCTCAAGGCACCCCCACCGACGTGTCGGTGGCACAGAGCAGCGGC
CAGCCCGTGCTCGACGAAGCGGCCCAGAAGCGCGTGCGGGAATGGCAGTTCAAGGCTGCCACCCGCAATGGCCAGGCCGT
GTCGCAGACCATCCAGGTGCCGGTCTCGTTCAAGCCGCCGGTGCCGCGTCCAAACGAATGTTTCGCCATCGAGGAACGCG
CACGCCGCGGCGGCTGA

Upstream 100 bases:

>100_bases
TGCGCTATTCCACCCATGACGTGGGCGGGCTGAGCGAGAACGACTTCATCTGCGCGGCCAAGACCGCGCAGCTCTACGAT
CAGGGAATCACTGCATGAAC

Downstream 100 bases:

>100_bases
GGACCGCGCAGGTCGCTGACGCCTCGTTTCTGCACGGCACGAGCGCACCGGCACAAATGCATGAGCGCCAGCGCCCTGTT
CGGGCGCGCTTGAGTTTCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 138; Mature: 138

Protein sequence:

>138_residues
MYRAALAGLIVATGLGGCGKSPQQASAPTVAPTELAALKTPPPEYSPQLACAGIGGTTVLRVVVGAQGTPTDVSVAQSSG
QPVLDEAAQKRVREWQFKAATRNGQAVSQTIQVPVSFKPPVPRPNECFAIEERARRGG

Sequences:

>Translated_138_residues
MYRAALAGLIVATGLGGCGKSPQQASAPTVAPTELAALKTPPPEYSPQLACAGIGGTTVLRVVVGAQGTPTDVSVAQSSG
QPVLDEAAQKRVREWQFKAATRNGQAVSQTIQVPVSFKPPVPRPNECFAIEERARRGG
>Mature_138_residues
MYRAALAGLIVATGLGGCGKSPQQASAPTVAPTELAALKTPPPEYSPQLACAGIGGTTVLRVVVGAQGTPTDVSVAQSSG
QPVLDEAAQKRVREWQFKAATRNGQAVSQTIQVPVSFKPPVPRPNECFAIEERARRGG

Specific function: Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requirin

COG id: COG0810

COG function: function code M; Periplasmic protein TonB, links inner and outer membranes

Gene ontology:

Cell location: Cell inner membrane; Single-pass membrane protein; Periplasmic side [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tonB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006260 [H]

Pfam domain/function: PF03544 TonB [H]

EC number: NA

Molecular weight: Translated: 14264; Mature: 14264

Theoretical pI: Translated: 9.83; Mature: 9.83

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYRAALAGLIVATGLGGCGKSPQQASAPTVAPTELAALKTPPPEYSPQLACAGIGGTTVL
CCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCEEEECCCHHHHH
RVVVGAQGTPTDVSVAQSSGQPVLDEAAQKRVREWQFKAATRNGQAVSQTIQVPVSFKPP
HHHHCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCHHEEHEEECCCCCCCC
VPRPNECFAIEERARRGG
CCCCCCCEEHHHHHHCCC
>Mature Secondary Structure
MYRAALAGLIVATGLGGCGKSPQQASAPTVAPTELAALKTPPPEYSPQLACAGIGGTTVL
CCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCEEEECCCHHHHH
RVVVGAQGTPTDVSVAQSSGQPVLDEAAQKRVREWQFKAATRNGQAVSQTIQVPVSFKPP
HHHHCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCHHEEHEEECCCCCCCC
VPRPNECFAIEERARRGG
CCCCCCCEEHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9371459 [H]