| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21242748
Identifier: 21242748
GI number: 21242748
Start: 2339460
End: 2340578
Strand: Reverse
Name: 21242748
Synonym: XAC2004
Alternate gene names: NA
Gene position: 2340578-2339460 (Counterclockwise)
Preceding gene: 21242749
Following gene: 21242747
Centisome position: 45.22
GC content: 64.34
Gene sequence:
>1119_bases ATGGGCATAACCGCCCGCTGGTGTCGCCAGCTGGACGAGTTGCCGGCCGGCGCCTGGGATGCGCTGCACGATGGCACGCA TCCCTTCATCAGCCACACATTTCTGCAAGGCCTCGAACGTGAGGGCTGCCTGCGCCCGGATTGGGGCTGGAACCCGCTGC ACCTGACCTTGTGGGAGGGCGACACCCTGGTAGCCGCGGCCCCCGGGTACCTCAAGAACAATTCGCACGGTGAGTTCGTC TTCGACCACGCCTGGGCGCATGCGTACGAGCGCTATGGCCAGGAATACTTTCCCAAGTGGCTGTGCGGGGTGCCCTACTC GCCCGTCACCGGCCCGCGTCTGCTCGGTGCACCCAAGTGGCGCGGCCACTTGCTGGCTGCCATGCGCGAGCTGGTGGAGC GCAGCGGGCTGTCGTCGGCGCATGTGAACTTTTATCCTGCAAATGAAGATGCCGGCTTCGATGCCGACTGGCTGGAGCGC AACGACCTGCAGTACCACTGGCACAACGTCAGCGGCTGGAACGACTTCGAGACGTTCCTGTCGGCGATGGATCACAAGCA CCGCAAGAACATTCGCCAGGAACGCGCCAAGGTGCAACGCGCTGGCGTGCAACTGCGCGTGGTGCATGGCGATGAGGCCA GCGATGCGGATTTGGATGCGATGTATGGCTTCTATCTCAAGACGTTCAACGAATACGGAAATTCGCCCGCGTTGACGCCG CAGTTCCTGCAGCACTTGGCGACGGCCATGCCGCGCCAGCTGGTGATGTTCCTGGCCGAGCTCGAGGGGCACCCCATCGC CGGCGCGCTATGCCTGCGCGGACAGGACACGCTGTACGGCCGCTATTGGGGCGGACAAGCGCTGCCCGGCCTGCATTTCG AGACCTGCTATTACCAGGGCATCGAATATTGCCTGCGCGAAGGCCTGACCCGCTTCGAGCCTGGCGCCCAAGGCCAGCAC AAGATCGCGCGCGGCTTTCTGCCAACGCTGGTGCGCAGCAGGCACTGGATCGCCGACCCGGGCTTTCGCGAACCCCTGGC ACAGTGGTGTGCGGACGAGCGCGATGCTGTGGCCCAACATGCACGGGAACTGTCCGAGCGCAGCCCTTTTCGCGATTGA
Upstream 100 bases:
>100_bases GGCCGCGCTGGATGCCGAACGCTTCCTCGACAAGAGCGCCTGAGATGGCGCCTGATTGCCGGCCGCGCCACGCGGCCAGC ATCGCCAAAGGGCTGCCGGC
Downstream 100 bases:
>100_bases TCCAAGTCAGGCGGTATGAGCGACGTTGATTGAATGCTCGACGATTGCGGCGTGCATGCACGGCGCAATCGTCGAGCAGC GCACACGCTGGAGCGACCGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 372; Mature: 371
Protein sequence:
>372_residues MGITARWCRQLDELPAGAWDALHDGTHPFISHTFLQGLEREGCLRPDWGWNPLHLTLWEGDTLVAAAPGYLKNNSHGEFV FDHAWAHAYERYGQEYFPKWLCGVPYSPVTGPRLLGAPKWRGHLLAAMRELVERSGLSSAHVNFYPANEDAGFDADWLER NDLQYHWHNVSGWNDFETFLSAMDHKHRKNIRQERAKVQRAGVQLRVVHGDEASDADLDAMYGFYLKTFNEYGNSPALTP QFLQHLATAMPRQLVMFLAELEGHPIAGALCLRGQDTLYGRYWGGQALPGLHFETCYYQGIEYCLREGLTRFEPGAQGQH KIARGFLPTLVRSRHWIADPGFREPLAQWCADERDAVAQHARELSERSPFRD
Sequences:
>Translated_372_residues MGITARWCRQLDELPAGAWDALHDGTHPFISHTFLQGLEREGCLRPDWGWNPLHLTLWEGDTLVAAAPGYLKNNSHGEFV FDHAWAHAYERYGQEYFPKWLCGVPYSPVTGPRLLGAPKWRGHLLAAMRELVERSGLSSAHVNFYPANEDAGFDADWLER NDLQYHWHNVSGWNDFETFLSAMDHKHRKNIRQERAKVQRAGVQLRVVHGDEASDADLDAMYGFYLKTFNEYGNSPALTP QFLQHLATAMPRQLVMFLAELEGHPIAGALCLRGQDTLYGRYWGGQALPGLHFETCYYQGIEYCLREGLTRFEPGAQGQH KIARGFLPTLVRSRHWIADPGFREPLAQWCADERDAVAQHARELSERSPFRD >Mature_371_residues GITARWCRQLDELPAGAWDALHDGTHPFISHTFLQGLEREGCLRPDWGWNPLHLTLWEGDTLVAAAPGYLKNNSHGEFVF DHAWAHAYERYGQEYFPKWLCGVPYSPVTGPRLLGAPKWRGHLLAAMRELVERSGLSSAHVNFYPANEDAGFDADWLERN DLQYHWHNVSGWNDFETFLSAMDHKHRKNIRQERAKVQRAGVQLRVVHGDEASDADLDAMYGFYLKTFNEYGNSPALTPQ FLQHLATAMPRQLVMFLAELEGHPIAGALCLRGQDTLYGRYWGGQALPGLHFETCYYQGIEYCLREGLTRFEPGAQGQHK IARGFLPTLVRSRHWIADPGFREPLAQWCADERDAVAQHARELSERSPFRD
Specific function: Unknown
COG id: COG3146
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42498; Mature: 42367
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGITARWCRQLDELPAGAWDALHDGTHPFISHTFLQGLEREGCLRPDWGWNPLHLTLWEG CCCCHHHHHHHHHCCCCHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECC DTLVAAAPGYLKNNSHGEFVFDHAWAHAYERYGQEYFPKWLCGVPYSPVTGPRLLGAPKW CEEEEECCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHCCCCCH RGHLLAAMRELVERSGLSSAHVNFYPANEDAGFDADWLERNDLQYHWHNVSGWNDFETFL HHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCHHHHCCCCCEEEECCCCCCHHHHHHH SAMDHKHRKNIRQERAKVQRAGVQLRVVHGDEASDADLDAMYGFYLKTFNEYGNSPALTP HHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCH QFLQHLATAMPRQLVMFLAELEGHPIAGALCLRGQDTLYGRYWGGQALPGLHFETCYYQG HHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCEEEEECCCCCCCCCHHHHHHHHH IEYCLREGLTRFEPGAQGQHKIARGFLPTLVRSRHWIADPGFREPLAQWCADERDAVAQH HHHHHHHCHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCHHHHHHHH ARELSERSPFRD HHHHHHCCCCCC >Mature Secondary Structure GITARWCRQLDELPAGAWDALHDGTHPFISHTFLQGLEREGCLRPDWGWNPLHLTLWEG CCCHHHHHHHHHCCCCHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECC DTLVAAAPGYLKNNSHGEFVFDHAWAHAYERYGQEYFPKWLCGVPYSPVTGPRLLGAPKW CEEEEECCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHCCCCCH RGHLLAAMRELVERSGLSSAHVNFYPANEDAGFDADWLERNDLQYHWHNVSGWNDFETFL HHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCHHHHCCCCCEEEECCCCCCHHHHHHH SAMDHKHRKNIRQERAKVQRAGVQLRVVHGDEASDADLDAMYGFYLKTFNEYGNSPALTP HHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCH QFLQHLATAMPRQLVMFLAELEGHPIAGALCLRGQDTLYGRYWGGQALPGLHFETCYYQG HHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCEEEEECCCCCCCCCHHHHHHHHH IEYCLREGLTRFEPGAQGQHKIARGFLPTLVRSRHWIADPGFREPLAQWCADERDAVAQH HHHHHHHCHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCHHHHHHHH ARELSERSPFRD HHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA