| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is aat
Identifier: 21242747
GI number: 21242747
Start: 2338448
End: 2339197
Strand: Reverse
Name: aat
Synonym: XAC2003
Alternate gene names: 21242747
Gene position: 2339197-2338448 (Counterclockwise)
Preceding gene: 21242748
Following gene: 21242746
Centisome position: 45.2
GC content: 66.27
Gene sequence:
>750_bases ATGGCGCGCCATCTCCCCTTTCTGCTCGATGCCGATCCAACGGCACCGTTTCCGCCGGCCGCACAGGCCCTGCGCGACCC GGACGGCCTGCTCGCCATCGGCGGCGACCTGGCGCCGCAGCGGCTGCTCAATGCCTATGCGCATGGCATTTTCCCGTGGT TTTCGCAGGACCAGCCGATCCTGTGGTGGAGTCCGGACCCGCGCATGGTGTTTCGCACCGATGCGCTGCGCCTGTCGTCG CGTTTCAGGCGTCAGCTACGCAGCAGCAGCTGGACCGTACGTGCCGACACCGCCTTCGAACAAGTCATCGACGCTTGCGC GTCGGTTCCGCGCGCTGGCCAGGACGGCACCTGGATCACCGCACAGATGCAGCAGGCATACATCGCGTTGCACGAGCTGG GCCATGCGCACTCACTGGAAGTGTTCGACGGCACGCGCCTGGTGGGCGGCATCTACGGCGTGGCGATCGGCCAGATGTTT TTCGGCGAAAGCATGTTCAGCGCCCAAAGCGGCGGCTCCAAGGTGGCACTGGCCGCGCTAGCGATGCATCTGCACACCGA AGGTTGGCCGCTGCTCGACGCGCAAGTGGAAAACCCGCACCTGCTCAGCCTGGGAGCGCAGCGCTTGCCGCGCGCGCAGT TTCTGCAACAGGTACAGTTGCAGGTCGCCCGCCCCGCCCTGCCCGGCACGTGGTCCGGACGCTACGGACAACGCCCCGCC AGCTCACTTGGTGAAGCCCGCTTAACATAA
Upstream 100 bases:
>100_bases CGGTGCACGCCGATTCCGTGAAACGGTCGCAGACTCACCTTGCGGCAGGCTCGTGCCGCGGTCAGCGCAGTCGGCTTGCC AGCTGCCCTACACTGCGCAG
Downstream 100 bases:
>100_bases AATTTGCACCACGGGGAGATGGCGCGTAAAATGCCGTCCCTTACGGCCCTGCCGGGCCAGCCGTGATTGCACAGGATTAC ATGTCGAAAGACGACTCCAT
Product: leucyl/phenylalanyl-tRNA--protein transferase
Products: NA
Alternate protein names: L/F-transferase; Leucyltransferase; Phenyalanyltransferase
Number of amino acids: Translated: 249; Mature: 248
Protein sequence:
>249_residues MARHLPFLLDADPTAPFPPAAQALRDPDGLLAIGGDLAPQRLLNAYAHGIFPWFSQDQPILWWSPDPRMVFRTDALRLSS RFRRQLRSSSWTVRADTAFEQVIDACASVPRAGQDGTWITAQMQQAYIALHELGHAHSLEVFDGTRLVGGIYGVAIGQMF FGESMFSAQSGGSKVALAALAMHLHTEGWPLLDAQVENPHLLSLGAQRLPRAQFLQQVQLQVARPALPGTWSGRYGQRPA SSLGEARLT
Sequences:
>Translated_249_residues MARHLPFLLDADPTAPFPPAAQALRDPDGLLAIGGDLAPQRLLNAYAHGIFPWFSQDQPILWWSPDPRMVFRTDALRLSS RFRRQLRSSSWTVRADTAFEQVIDACASVPRAGQDGTWITAQMQQAYIALHELGHAHSLEVFDGTRLVGGIYGVAIGQMF FGESMFSAQSGGSKVALAALAMHLHTEGWPLLDAQVENPHLLSLGAQRLPRAQFLQQVQLQVARPALPGTWSGRYGQRPA SSLGEARLT >Mature_248_residues ARHLPFLLDADPTAPFPPAAQALRDPDGLLAIGGDLAPQRLLNAYAHGIFPWFSQDQPILWWSPDPRMVFRTDALRLSSR FRRQLRSSSWTVRADTAFEQVIDACASVPRAGQDGTWITAQMQQAYIALHELGHAHSLEVFDGTRLVGGIYGVAIGQMFF GESMFSAQSGGSKVALAALAMHLHTEGWPLLDAQVENPHLLSLGAQRLPRAQFLQQVQLQVARPALPGTWSGRYGQRPAS SLGEARLT
Specific function: Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine
COG id: COG2360
COG function: function code O; Leu/Phe-tRNA-protein transferase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the L/F-transferase family
Homologues:
Organism=Escherichia coli, GI1787111, Length=209, Percent_Identity=50.2392344497608, Blast_Score=198, Evalue=3e-52,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): LFTR_XANAC (Q8PL03)
Other databases:
- EMBL: AE008923 - RefSeq: NP_642329.1 - ProteinModelPortal: Q8PL03 - SMR: Q8PL03 - GeneID: 1156074 - GenomeReviews: AE008923_GR - KEGG: xac:XAC2003 - NMPDR: fig|190486.1.peg.1973 - HOGENOM: HBG485363 - OMA: GEPILWW - ProtClustDB: PRK00301 - BioCyc: XAXO190486:XAC2003-MONOMER - BRENDA: 2.3.2.6 - GO: GO:0005737 - HAMAP: MF_00688 - InterPro: IPR016181 - InterPro: IPR004616 - TIGRFAMs: TIGR00667
Pfam domain/function: PF03588 Leu_Phe_trans; SSF55729 Acyl_CoA_acyltransferase
EC number: =2.3.2.6
Molecular weight: Translated: 27301; Mature: 27170
Theoretical pI: Translated: 7.84; Mature: 7.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARHLPFLLDADPTAPFPPAAQALRDPDGLLAIGGDLAPQRLLNAYAHGIFPWFSQDQPI CCCCCCEEEECCCCCCCCHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHCCCCCCCCCCE LWWSPDPRMVFRTDALRLSSRFRRQLRSSSWTVRADTAFEQVIDACASVPRAGQDGTWIT EEECCCCCEEEEHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHCCCCCCCCCCEEE AQMQQAYIALHELGHAHSLEVFDGTRLVGGIYGVAIGQMFFGESMFSAQSGGSKVALAAL HHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH AMHLHTEGWPLLDAQVENPHLLSLGAQRLPRAQFLQQVQLQVARPALPGTWSGRYGQRPA HHHHHCCCCCEEECCCCCCEEEHHCHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCH SSLGEARLT HHCCCCCCC >Mature Secondary Structure ARHLPFLLDADPTAPFPPAAQALRDPDGLLAIGGDLAPQRLLNAYAHGIFPWFSQDQPI CCCCCEEEECCCCCCCCHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHCCCCCCCCCCE LWWSPDPRMVFRTDALRLSSRFRRQLRSSSWTVRADTAFEQVIDACASVPRAGQDGTWIT EEECCCCCEEEEHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHCCCCCCCCCCEEE AQMQQAYIALHELGHAHSLEVFDGTRLVGGIYGVAIGQMFFGESMFSAQSGGSKVALAAL HHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH AMHLHTEGWPLLDAQVENPHLLSLGAQRLPRAQFLQQVQLQVARPALPGTWSGRYGQRPA HHHHHCCCCCEEECCCCCCEEEHHCHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCH SSLGEARLT HHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12024217