| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is fabG [H]
Identifier: 21242707
GI number: 21242707
Start: 2295272
End: 2296036
Strand: Reverse
Name: fabG [H]
Synonym: XAC1963
Alternate gene names: 21242707
Gene position: 2296036-2295272 (Counterclockwise)
Preceding gene: 21242708
Following gene: 21242706
Centisome position: 44.36
GC content: 64.58
Gene sequence:
>765_bases GTGAGTATCCCCCCCGACCCTTTCTCGCTTGCCGGCAAGCGCATCCTCGTCACTGGCGCATCCTCGGGTATTGGCCGCCA GATCGCCATTTCCTGCGCCGAGCTCGGTGCCCAGGTGGCAATCAGCGGGCGCGACCGCGCGCGACTGGCCTCGACCCTAG AGGCGTTGGCAGGCGAAGGACACGTGACGATCGCGGCAGACCTTGACCGGCAGGAGGACATCGATCACTTGGTCGCCCAC GTTGGCGTGTTGGATGGGATGGCGCACGCGGCTGGCATCTCTCGGCTGGTTCCGCTGCGCCTGGTCAATCGGGCGCATTT GGACGACATGTTCTCCAGCAACACGTTCGCGCCGATGCTGCTGACCCGGGGACTGCTGGCAAAAAAACGCATCGCCGCGC AAGGCTCGCTGGTGTTCGTCGCTTCGGTCGCCTCGCATATCGGGCCGATGGCCAGTAGCGCGTATGCGGCCAGCAAAAGC GCGCTGCTCGGTATGGTGAGATCGCTGGCGCAGGAAGTTGCCAAGAACGGCATCCGCGCCAACTGCATTGCGCCGGGTTA CGTGCGCACGCCGCTGCTGGACGGCCTACAAGGCAGCGGCGGCAATATGGAAGGGCTTTTCGAACTGACACCGCTCGGCA TGGGCGAGCCGGAGGACGTCGCCTACGCCGTCGCGTTCCTGCTGGCCGATGCAAGTCGCTGGATCACGCGCAACTATTTC GTGGTGGATGGTGGCCTCACCGTGCCGATGGACATCTACGCATGA
Upstream 100 bases:
>100_bases GGTCCAAGCGCGTGTTGCTGTGCGGCTTCGGCATTGGCTTGTCGTGGGGCAGCTGTCTGCTCGACATCGAAGGGGCCGTT TTTCCGGATCTGATCGAATC
Downstream 100 bases:
>100_bases ACACGCCGGCTCACAGTGCGTTTTCGCTCAACGGAAAGACGATCCTGGTGACGGGAGCGTCGTCGGGGCTGGGCCGGCAA ATCGCCATCGCCTGCGCACA
Product: 3-oxoacyl-[ACP] reductase
Products: NA
Alternate protein names: 5-keto-D-gluconate 5-reductase [H]
Number of amino acids: Translated: 254; Mature: 253
Protein sequence:
>254_residues MSIPPDPFSLAGKRILVTGASSGIGRQIAISCAELGAQVAISGRDRARLASTLEALAGEGHVTIAADLDRQEDIDHLVAH VGVLDGMAHAAGISRLVPLRLVNRAHLDDMFSSNTFAPMLLTRGLLAKKRIAAQGSLVFVASVASHIGPMASSAYAASKS ALLGMVRSLAQEVAKNGIRANCIAPGYVRTPLLDGLQGSGGNMEGLFELTPLGMGEPEDVAYAVAFLLADASRWITRNYF VVDGGLTVPMDIYA
Sequences:
>Translated_254_residues MSIPPDPFSLAGKRILVTGASSGIGRQIAISCAELGAQVAISGRDRARLASTLEALAGEGHVTIAADLDRQEDIDHLVAH VGVLDGMAHAAGISRLVPLRLVNRAHLDDMFSSNTFAPMLLTRGLLAKKRIAAQGSLVFVASVASHIGPMASSAYAASKS ALLGMVRSLAQEVAKNGIRANCIAPGYVRTPLLDGLQGSGGNMEGLFELTPLGMGEPEDVAYAVAFLLADASRWITRNYF VVDGGLTVPMDIYA >Mature_253_residues SIPPDPFSLAGKRILVTGASSGIGRQIAISCAELGAQVAISGRDRARLASTLEALAGEGHVTIAADLDRQEDIDHLVAHV GVLDGMAHAAGISRLVPLRLVNRAHLDDMFSSNTFAPMLLTRGLLAKKRIAAQGSLVFVASVASHIGPMASSAYAASKSA LLGMVRSLAQEVAKNGIRANCIAPGYVRTPLLDGLQGSGGNMEGLFELTPLGMGEPEDVAYAVAFLLADASRWITRNYFV VDGGLTVPMDIYA
Specific function: Involved in the non-phosphorylative, ketogenic oxidation of glucose and oxidizes gluconate to 5-ketogluconate. Dependent on NADP, almost inactive with NAD [H]
COG id: COG1028
COG function: function code IQR; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]
Homologues:
Organism=Homo sapiens, GI40254992, Length=242, Percent_Identity=34.7107438016529, Blast_Score=107, Evalue=8e-24, Organism=Homo sapiens, GI32483357, Length=248, Percent_Identity=34.6774193548387, Blast_Score=107, Evalue=1e-23, Organism=Homo sapiens, GI5031737, Length=243, Percent_Identity=33.3333333333333, Blast_Score=104, Evalue=9e-23, Organism=Homo sapiens, GI15277342, Length=247, Percent_Identity=30.7692307692308, Blast_Score=102, Evalue=4e-22, Organism=Homo sapiens, GI33667109, Length=188, Percent_Identity=36.1702127659575, Blast_Score=94, Evalue=1e-19, Organism=Homo sapiens, GI7705925, Length=242, Percent_Identity=30.5785123966942, Blast_Score=88, Evalue=6e-18, Organism=Homo sapiens, GI19923817, Length=261, Percent_Identity=27.5862068965517, Blast_Score=87, Evalue=1e-17, Organism=Homo sapiens, GI126723750, Length=251, Percent_Identity=31.0756972111554, Blast_Score=86, Evalue=3e-17, Organism=Homo sapiens, GI66933014, Length=245, Percent_Identity=28.1632653061224, Blast_Score=82, Evalue=6e-16, Organism=Homo sapiens, GI4503817, Length=200, Percent_Identity=26, Blast_Score=75, Evalue=4e-14, Organism=Homo sapiens, GI142976729, Length=211, Percent_Identity=27.4881516587678, Blast_Score=74, Evalue=1e-13, Organism=Homo sapiens, GI7657478, Length=188, Percent_Identity=31.9148936170213, Blast_Score=74, Evalue=1e-13, Organism=Homo sapiens, GI109715829, Length=233, Percent_Identity=30.0429184549356, Blast_Score=69, Evalue=4e-12, Organism=Homo sapiens, GI126723191, Length=185, Percent_Identity=33.5135135135135, Blast_Score=69, Evalue=4e-12, Organism=Homo sapiens, GI59889578, Length=224, Percent_Identity=30.3571428571429, Blast_Score=69, Evalue=5e-12, Organism=Homo sapiens, GI210032110, Length=197, Percent_Identity=27.9187817258883, Blast_Score=67, Evalue=2e-11, Organism=Homo sapiens, GI32455239, Length=251, Percent_Identity=27.4900398406374, Blast_Score=66, Evalue=3e-11, Organism=Homo sapiens, GI5031765, Length=251, Percent_Identity=27.4900398406374, Blast_Score=66, Evalue=3e-11, Organism=Escherichia coli, GI1790717, Length=250, Percent_Identity=31.2, Blast_Score=114, Evalue=8e-27, Organism=Escherichia coli, GI1787335, Length=243, Percent_Identity=31.2757201646091, Blast_Score=100, Evalue=7e-23, Organism=Escherichia coli, GI87082160, Length=249, Percent_Identity=29.3172690763052, Blast_Score=96, Evalue=2e-21, Organism=Escherichia coli, GI1789208, Length=248, Percent_Identity=30.241935483871, Blast_Score=93, Evalue=2e-20, Organism=Escherichia coli, GI87082100, Length=255, Percent_Identity=29.4117647058824, Blast_Score=92, Evalue=3e-20, Organism=Escherichia coli, GI1786812, Length=249, Percent_Identity=32.1285140562249, Blast_Score=91, Evalue=1e-19, Organism=Escherichia coli, GI1787526, Length=243, Percent_Identity=33.3333333333333, Blast_Score=90, Evalue=1e-19, Organism=Escherichia coli, GI1789378, Length=250, Percent_Identity=31.6, Blast_Score=85, Evalue=4e-18, Organism=Escherichia coli, GI1786701, Length=190, Percent_Identity=32.1052631578947, Blast_Score=82, Evalue=4e-17, Organism=Escherichia coli, GI2367175, Length=248, Percent_Identity=30.6451612903226, Blast_Score=80, Evalue=2e-16, Organism=Escherichia coli, GI2367365, Length=244, Percent_Identity=31.5573770491803, Blast_Score=74, Evalue=8e-15, Organism=Escherichia coli, GI1787905, Length=248, Percent_Identity=27.0161290322581, Blast_Score=72, Evalue=4e-14, Organism=Escherichia coli, GI1788459, Length=241, Percent_Identity=23.2365145228216, Blast_Score=66, Evalue=3e-12, Organism=Caenorhabditis elegans, GI17555706, Length=244, Percent_Identity=29.0983606557377, Blast_Score=104, Evalue=4e-23, Organism=Caenorhabditis elegans, GI17561402, Length=258, Percent_Identity=29.4573643410853, Blast_Score=100, Evalue=8e-22, Organism=Caenorhabditis elegans, GI115534694, Length=251, Percent_Identity=31.0756972111554, Blast_Score=100, Evalue=1e-21, Organism=Caenorhabditis elegans, GI25147288, Length=247, Percent_Identity=27.5303643724696, Blast_Score=97, Evalue=1e-20, Organism=Caenorhabditis elegans, GI17562906, Length=272, Percent_Identity=34.1911764705882, Blast_Score=91, Evalue=4e-19, Organism=Caenorhabditis elegans, GI17531453, Length=272, Percent_Identity=33.0882352941176, Blast_Score=90, Evalue=1e-18, Organism=Caenorhabditis elegans, GI17560676, Length=255, Percent_Identity=29.4117647058824, Blast_Score=89, Evalue=3e-18, Organism=Caenorhabditis elegans, GI72000259, Length=266, Percent_Identity=31.9548872180451, Blast_Score=87, Evalue=6e-18, Organism=Caenorhabditis elegans, GI17563726, Length=269, Percent_Identity=31.5985130111524, Blast_Score=87, Evalue=8e-18, Organism=Caenorhabditis elegans, GI17560150, Length=269, Percent_Identity=30.8550185873606, Blast_Score=86, Evalue=2e-17, Organism=Caenorhabditis elegans, GI193204405, Length=272, Percent_Identity=31.6176470588235, Blast_Score=83, Evalue=2e-16, Organism=Caenorhabditis elegans, GI17562904, Length=266, Percent_Identity=29.3233082706767, Blast_Score=82, Evalue=2e-16, Organism=Caenorhabditis elegans, GI17562990, Length=266, Percent_Identity=31.203007518797, Blast_Score=82, Evalue=2e-16, Organism=Caenorhabditis elegans, GI17538182, Length=250, Percent_Identity=30, Blast_Score=82, Evalue=3e-16, Organism=Caenorhabditis elegans, GI17562910, Length=267, Percent_Identity=29.5880149812734, Blast_Score=82, Evalue=3e-16, Organism=Caenorhabditis elegans, GI71994600, Length=249, Percent_Identity=28.5140562248996, Blast_Score=81, Evalue=5e-16, Organism=Caenorhabditis elegans, GI17562908, Length=271, Percent_Identity=32.4723247232472, Blast_Score=80, Evalue=1e-15, Organism=Caenorhabditis elegans, GI71994604, Length=248, Percent_Identity=29.4354838709677, Blast_Score=79, Evalue=2e-15, Organism=Caenorhabditis elegans, GI17560220, Length=268, Percent_Identity=28.7313432835821, Blast_Score=78, Evalue=4e-15, Organism=Caenorhabditis elegans, GI17538480, Length=275, Percent_Identity=29.4545454545455, Blast_Score=77, Evalue=8e-15, Organism=Caenorhabditis elegans, GI17559104, Length=270, Percent_Identity=30, Blast_Score=77, Evalue=1e-14, Organism=Caenorhabditis elegans, GI17551412, Length=277, Percent_Identity=28.8808664259928, Blast_Score=77, Evalue=1e-14, Organism=Caenorhabditis elegans, GI17538486, Length=271, Percent_Identity=28.7822878228782, Blast_Score=75, Evalue=5e-14, Organism=Caenorhabditis elegans, GI17564282, Length=198, Percent_Identity=30.8080808080808, Blast_Score=74, Evalue=5e-14, Organism=Caenorhabditis elegans, GI17544670, Length=265, Percent_Identity=28.3018867924528, Blast_Score=72, Evalue=2e-13, Organism=Caenorhabditis elegans, GI193203117, Length=197, Percent_Identity=27.9187817258883, Blast_Score=68, Evalue=4e-12, Organism=Caenorhabditis elegans, GI193203115, Length=194, Percent_Identity=28.3505154639175, Blast_Score=67, Evalue=1e-11, Organism=Caenorhabditis elegans, GI17568967, Length=187, Percent_Identity=30.4812834224599, Blast_Score=64, Evalue=6e-11, Organism=Saccharomyces cerevisiae, GI6324126, Length=262, Percent_Identity=28.2442748091603, Blast_Score=73, Evalue=3e-14, Organism=Saccharomyces cerevisiae, GI6322227, Length=204, Percent_Identity=30.3921568627451, Blast_Score=66, Evalue=4e-12, Organism=Saccharomyces cerevisiae, GI6322861, Length=202, Percent_Identity=26.2376237623762, Blast_Score=63, Evalue=4e-11, Organism=Drosophila melanogaster, GI21355319, Length=248, Percent_Identity=31.8548387096774, Blast_Score=103, Evalue=1e-22, Organism=Drosophila melanogaster, GI23397609, Length=246, Percent_Identity=32.520325203252, Blast_Score=99, Evalue=2e-21, Organism=Drosophila melanogaster, GI24639444, Length=248, Percent_Identity=30.6451612903226, Blast_Score=97, Evalue=1e-20, Organism=Drosophila melanogaster, GI21357041, Length=253, Percent_Identity=32.0158102766798, Blast_Score=90, Evalue=1e-18, Organism=Drosophila melanogaster, GI24643142, Length=240, Percent_Identity=30.4166666666667, Blast_Score=86, Evalue=2e-17, Organism=Drosophila melanogaster, GI28571526, Length=253, Percent_Identity=29.6442687747036, Blast_Score=83, Evalue=2e-16, Organism=Drosophila melanogaster, GI24644339, Length=258, Percent_Identity=30.6201550387597, Blast_Score=81, Evalue=6e-16, Organism=Drosophila melanogaster, GI21358495, Length=226, Percent_Identity=31.4159292035398, Blast_Score=76, Evalue=3e-14, Organism=Drosophila melanogaster, GI17737361, Length=225, Percent_Identity=28.4444444444444, Blast_Score=71, Evalue=8e-13, Organism=Drosophila melanogaster, GI21356301, Length=197, Percent_Identity=26.9035532994924, Blast_Score=68, Evalue=7e-12, Organism=Drosophila melanogaster, GI24644337, Length=257, Percent_Identity=30.3501945525292, Blast_Score=65, Evalue=4e-11, Organism=Drosophila melanogaster, GI24581726, Length=198, Percent_Identity=25.7575757575758, Blast_Score=65, Evalue=6e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002198 - InterPro: IPR002347 - InterPro: IPR016040 - InterPro: IPR020904 [H]
Pfam domain/function: PF00106 adh_short [H]
EC number: =1.1.1.69 [H]
Molecular weight: Translated: 26507; Mature: 26376
Theoretical pI: Translated: 6.79; Mature: 6.79
Prosite motif: PS00061 ADH_SHORT
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIPPDPFSLAGKRILVTGASSGIGRQIAISCAELGAQVAISGRDRARLASTLEALAGEG CCCCCCCHHHCCCEEEEEECCCCCCHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHCCCC HVTIAADLDRQEDIDHLVAHVGVLDGMAHAAGISRLVPLRLVNRAHLDDMFSSNTFAPML CEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH LTRGLLAKKRIAAQGSLVFVASVASHIGPMASSAYAASKSALLGMVRSLAQEVAKNGIRA HHHHHHHHHHHHHCCCEEHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEE NCIAPGYVRTPLLDGLQGSGGNMEGLFELTPLGMGEPEDVAYAVAFLLADASRWITRNYF ECCCCCCHHHHHHCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCEE VVDGGLTVPMDIYA EEECCCCCCEEECC >Mature Secondary Structure SIPPDPFSLAGKRILVTGASSGIGRQIAISCAELGAQVAISGRDRARLASTLEALAGEG CCCCCCHHHCCCEEEEEECCCCCCHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHCCCC HVTIAADLDRQEDIDHLVAHVGVLDGMAHAAGISRLVPLRLVNRAHLDDMFSSNTFAPML CEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH LTRGLLAKKRIAAQGSLVFVASVASHIGPMASSAYAASKSALLGMVRSLAQEVAKNGIRA HHHHHHHHHHHHHCCCEEHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEE NCIAPGYVRTPLLDGLQGSGGNMEGLFELTPLGMGEPEDVAYAVAFLLADASRWITRNYF ECCCCCCHHHHHHCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCEE VVDGGLTVPMDIYA EEECCCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7751271 [H]