| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is fabH [C]
Identifier: 21242708
GI number: 21242708
Start: 2296033
End: 2297034
Strand: Reverse
Name: fabH [C]
Synonym: XAC1964
Alternate gene names: 21242708
Gene position: 2297034-2296033 (Counterclockwise)
Preceding gene: 21242709
Following gene: 21242707
Centisome position: 44.38
GC content: 62.38
Gene sequence:
>1002_bases ATGGCGACCTGCGTGCCCAAGCGCGTGGTGTCCAATCTCACCGATTGCCGCCCGCAAATCCGCACCGAGCGCGAGCGGCT GGTGCGCAACATCGGCATCGAGACCCGCCGCATGGCCTCTGAATGGCAATGTTTTTCCGATCTGGCCTTCGACGCGACCG AGGTGCTGCTGGAGCGTCTGCAGTGGAAGCGCGAGGAGATCGATGCACTGATCGTGGTGACGCAGTCGCCGGACTATCCG ATTCCTGCCACCGCGATCATCCTGCAAGACAGGCTGGGGCTGTCGCATGCCACCGTCGCCTTCGACGTCAACCTGGGCTG CTCGGCCTACCCGTTCGGCATCAACCTGCTCGGCTCGATGATCGCCGCCGGCGGCGTCAAGAAAGGCCTGCTACTGGTCG GCGACCGTAGCGCGAACCTGGAAGACCCGATCTTCTCCGACTCGGGCACTGCCACCGCTTTGGAGTTCAGCGCCGACGCG CCGCCGATGTATTTCGACCTCAATAGCGACGGCAGCGGCTATAAGGCAATCATCTTGCCGGTCGGCGGCCAACGCGAACC GGTTGCCATACAGCATCTGATGCCGTTCCGCGAAGAACCCAACGGCCCGTGGCGACGCGGCACGGATCTGATCCTGGACG GCGTGGCGGTGTTGAGCTTCTCCACTCAGCGCATTCCGCCAGCGGTACAGAAACTGCTCGACTACACCGGCGCTTCCAAG GATGAGATCGACTACTTTGTGTTCCACCAAGCCAACCGCATGATCAACGAGACCATTCGCAAGAAACTCGGCCTGCCGGT GGAAAAAGTGCCTTCGACGCTGCGCGACTTCGGCAACTCGAGCGGCGCCTCGCTGCCGGTGACCATGACCGCGCGCATCA ACAAGGAGCTCGAATCCGGGTCCAAGCGCGTGTTGCTGTGCGGCTTCGGCATTGGCTTGTCGTGGGGCAGCTGTCTGCTC GACATCGAAGGGGCCGTTTTTCCGGATCTGATCGAATCGTGA
Upstream 100 bases:
>100_bases AAGATCTCAACGCTGCCATCACCGTCGGCGATCTCTACAAACTGACCGAGGCGTAAGCACCATGCCGACCTCCACGCTGC ATAACGTCCGCTTTGCCGGT
Downstream 100 bases:
>100_bases GTATCCCCCCCGACCCTTTCTCGCTTGCCGGCAAGCGCATCCTCGTCACTGGCGCATCCTCGGGTATTGGCCGCCAGATC GCCATTTCCTGCGCCGAGCT
Product: 3-oxoacyl-[ACP] synthase
Products: NA
Alternate protein names: 3-oxoacyl-[acyl-carrier-protein] synthase III; Beta-ketoacyl-ACP synthase III; KAS III [H]
Number of amino acids: Translated: 333; Mature: 332
Protein sequence:
>333_residues MATCVPKRVVSNLTDCRPQIRTERERLVRNIGIETRRMASEWQCFSDLAFDATEVLLERLQWKREEIDALIVVTQSPDYP IPATAIILQDRLGLSHATVAFDVNLGCSAYPFGINLLGSMIAAGGVKKGLLLVGDRSANLEDPIFSDSGTATALEFSADA PPMYFDLNSDGSGYKAIILPVGGQREPVAIQHLMPFREEPNGPWRRGTDLILDGVAVLSFSTQRIPPAVQKLLDYTGASK DEIDYFVFHQANRMINETIRKKLGLPVEKVPSTLRDFGNSSGASLPVTMTARINKELESGSKRVLLCGFGIGLSWGSCLL DIEGAVFPDLIES
Sequences:
>Translated_333_residues MATCVPKRVVSNLTDCRPQIRTERERLVRNIGIETRRMASEWQCFSDLAFDATEVLLERLQWKREEIDALIVVTQSPDYP IPATAIILQDRLGLSHATVAFDVNLGCSAYPFGINLLGSMIAAGGVKKGLLLVGDRSANLEDPIFSDSGTATALEFSADA PPMYFDLNSDGSGYKAIILPVGGQREPVAIQHLMPFREEPNGPWRRGTDLILDGVAVLSFSTQRIPPAVQKLLDYTGASK DEIDYFVFHQANRMINETIRKKLGLPVEKVPSTLRDFGNSSGASLPVTMTARINKELESGSKRVLLCGFGIGLSWGSCLL DIEGAVFPDLIES >Mature_332_residues ATCVPKRVVSNLTDCRPQIRTERERLVRNIGIETRRMASEWQCFSDLAFDATEVLLERLQWKREEIDALIVVTQSPDYPI PATAIILQDRLGLSHATVAFDVNLGCSAYPFGINLLGSMIAAGGVKKGLLLVGDRSANLEDPIFSDSGTATALEFSADAP PMYFDLNSDGSGYKAIILPVGGQREPVAIQHLMPFREEPNGPWRRGTDLILDGVAVLSFSTQRIPPAVQKLLDYTGASKD EIDYFVFHQANRMINETIRKKLGLPVEKVPSTLRDFGNSSGASLPVTMTARINKELESGSKRVLLCGFGIGLSWGSCLLD IEGAVFPDLIES
Specific function: May catalyze the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP [H]
COG id: COG0332
COG function: function code I; 3-oxoacyl-[acyl-carrier-protein] synthase III
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the fabH family [H]
Homologues:
Organism=Escherichia coli, GI1787333, Length=323, Percent_Identity=26.625386996904, Blast_Score=115, Evalue=4e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013751 - InterPro: IPR013747 - InterPro: IPR016039 - InterPro: IPR016038 [H]
Pfam domain/function: PF08545 ACP_syn_III; PF08541 ACP_syn_III_C [H]
EC number: =2.3.1.180 [H]
Molecular weight: Translated: 36458; Mature: 36327
Theoretical pI: Translated: 4.97; Mature: 4.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATCVPKRVVSNLTDCRPQIRTERERLVRNIGIETRRMASEWQCFSDLAFDATEVLLERL CCCCCHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH QWKREEIDALIVVTQSPDYPIPATAIILQDRLGLSHATVAFDVNLGCSAYPFGINLLGSM HHHHHCCCEEEEEECCCCCCCCCEEEEEEHHCCCCEEEEEEEECCCCCCCCCHHHHHHHH IAAGGVKKGLLLVGDRSANLEDPIFSDSGTATALEFSADAPPMYFDLNSDGSGYKAIILP HHHCCCCCCEEEEECCCCCCCCCCCCCCCCEEEEEECCCCCCEEEEECCCCCCEEEEEEE VGGQREPVAIQHLMPFREEPNGPWRRGTDLILDGVAVLSFSTQRIPPAVQKLLDYTGASK CCCCCCCCHHHHHCCCCCCCCCCCCCCCHHHHHHHHHEEECCCCCCHHHHHHHHHCCCCC DEIDYFVFHQANRMINETIRKKLGLPVEKVPSTLRDFGNSSGASLPVTMTARINKELESG CCCEEEEEHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCEEEEEEEEHHHHHHHCC SKRVLLCGFGIGLSWGSCLLDIEGAVFPDLIES CCEEEEEEECCCCCCCCEEEEECCCCCHHHHCC >Mature Secondary Structure ATCVPKRVVSNLTDCRPQIRTERERLVRNIGIETRRMASEWQCFSDLAFDATEVLLERL CCCCHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH QWKREEIDALIVVTQSPDYPIPATAIILQDRLGLSHATVAFDVNLGCSAYPFGINLLGSM HHHHHCCCEEEEEECCCCCCCCCEEEEEEHHCCCCEEEEEEEECCCCCCCCCHHHHHHHH IAAGGVKKGLLLVGDRSANLEDPIFSDSGTATALEFSADAPPMYFDLNSDGSGYKAIILP HHHCCCCCCEEEEECCCCCCCCCCCCCCCCEEEEEECCCCCCEEEEECCCCCCEEEEEEE VGGQREPVAIQHLMPFREEPNGPWRRGTDLILDGVAVLSFSTQRIPPAVQKLLDYTGASK CCCCCCCCHHHHHCCCCCCCCCCCCCCCHHHHHHHHHEEECCCCCCHHHHHHHHHCCCCC DEIDYFVFHQANRMINETIRKKLGLPVEKVPSTLRDFGNSSGASLPVTMTARINKELESG CCCEEEEEHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCEEEEEEEEHHHHHHHCC SKRVLLCGFGIGLSWGSCLLDIEGAVFPDLIES CCEEEEEEECCCCCCCCEEEEECCCCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10688204 [H]