| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21242446
Identifier: 21242446
GI number: 21242446
Start: 1953834
End: 1955021
Strand: Direct
Name: 21242446
Synonym: XAC1697
Alternate gene names: NA
Gene position: 1953834-1955021 (Clockwise)
Preceding gene: 21242445
Following gene: 21242447
Centisome position: 37.75
GC content: 67.09
Gene sequence:
>1188_bases GTGGAGCGGTCGATGGCCATGGCCGATGTCTGCCTGCAAGGCGCACGCGCGATCACCCAGGCGGGTCCGTCGCGTGCCGC AGTGACGATCCGCGCGGGGCGCTTCGGCGGCACGCTCGGCACCGGCACCGTGCGCCTGGATCTGCAAGGGCATGTACTGG CGCCGGGCCTGATCAATGCGCACGAACATCTGCAGGTCAACTGCGTGCCACCGCTGCCGCAGGCCACGCCGTTCGCCAAC AGCTATGCGTGGATCGAGTCATTTCAGGCGCATTTTCAGCACCCGGACGTGGCCGCCGCACTACGCGTGCCCAAGGCGGT ACGGCTGCGCCATGGCGGTTTGAAGAACCTGTTGGCCGGCGTCACCTGCGTGGCCCAGCACGACCCATGGCATGCCACGC TGGACGAGGCGAATTTCCCGGTGAGCCTGCTGCGCGACTTCGGCTGGAGCTACGCATTGGGGTGGGCAGGCTATGGCCCG CCCGTACAAGGCAGCTTTGCCGCAACCCTGCCAGCGCATCCCTGGATGATCCATCTGGCCGAAGGCACCGATGCGGTGGC GCGTGCCGAGCTCGACGAACTCGACCGGCTCGGCTGCCTGGCCGCCAACACGGTGTTGATCCACGGCGTAGGCATGGGTG AGCACGATATCGAGCGGGTGATCGCGCGTGGCGCGGCCGTGGTGTGGTGTCCTTCCAGCAATCAGGCGCTGCTCGGCCGC ACGCTCGATCCGTGGCGCTTGTGCATGGCCGGCCGACTGGCGCTGGGCAACGATTCGCGCATCAGCGGCGCGCGCGACCT GCTGGAAGAACTGCAGATCGCCAGCCAGAGCGGGTTGGCACCGGACCAATTGCTTGGCATGGTCACCGGTGACTGCGCGC GTATCCTGCGCATGGCAACGCGTGGGCGTATTGCGCCTGGAGCCACTGCAGATGTGTTGATCGTGCGCGACCGCGGTGGC GAGCCTGCCAGCAGCATCGTCGGTTGCACGCGCAGCGACTTGCGTGCGGTGATTCGCGATGGCAGGCCGCGCATCGCCGA TCTGGATTTTGCGTCGTGGTTCGACGCGGCCGGCATCCGGACCGTGCCGGTGTTGCTGGACGGACGGCCCAAATTGCTCG ATGCCACGCTGGCCGATCCGGCGGTGCTAGCGCTCGAGCCCGGTCTTAGAGCGTGTTATGTACGTTGA
Upstream 100 bases:
>100_bases CCTGTCCGAGCGCCTGGGGCGCTGCGACGACCGGTGGGGCGGGCTGCCGCTGCTGCGCGACATGGGCGATCACTTTTTGA TCGTGATGCGCAAGCGCTGA
Downstream 100 bases:
>100_bases GGTGAGTGCGAAGCGTCCTGTGGCGCGTCGAGACAAGGCGTGCGCTGCGGCCCAGGCTGGCCCGCCTGGGCAAGGCGCGC AACGCGGTCTCGGCGCGCCA
Product: hypothetical protein
Products: NA
Alternate protein names: Metal-Dependent Hydrolase; Deaminase; Metal Dependent Amidohydrolase; Chlorohydrolase Family Protein
Number of amino acids: Translated: 395; Mature: 395
Protein sequence:
>395_residues MERSMAMADVCLQGARAITQAGPSRAAVTIRAGRFGGTLGTGTVRLDLQGHVLAPGLINAHEHLQVNCVPPLPQATPFAN SYAWIESFQAHFQHPDVAAALRVPKAVRLRHGGLKNLLAGVTCVAQHDPWHATLDEANFPVSLLRDFGWSYALGWAGYGP PVQGSFAATLPAHPWMIHLAEGTDAVARAELDELDRLGCLAANTVLIHGVGMGEHDIERVIARGAAVVWCPSSNQALLGR TLDPWRLCMAGRLALGNDSRISGARDLLEELQIASQSGLAPDQLLGMVTGDCARILRMATRGRIAPGATADVLIVRDRGG EPASSIVGCTRSDLRAVIRDGRPRIADLDFASWFDAAGIRTVPVLLDGRPKLLDATLADPAVLALEPGLRACYVR
Sequences:
>Translated_395_residues MERSMAMADVCLQGARAITQAGPSRAAVTIRAGRFGGTLGTGTVRLDLQGHVLAPGLINAHEHLQVNCVPPLPQATPFAN SYAWIESFQAHFQHPDVAAALRVPKAVRLRHGGLKNLLAGVTCVAQHDPWHATLDEANFPVSLLRDFGWSYALGWAGYGP PVQGSFAATLPAHPWMIHLAEGTDAVARAELDELDRLGCLAANTVLIHGVGMGEHDIERVIARGAAVVWCPSSNQALLGR TLDPWRLCMAGRLALGNDSRISGARDLLEELQIASQSGLAPDQLLGMVTGDCARILRMATRGRIAPGATADVLIVRDRGG EPASSIVGCTRSDLRAVIRDGRPRIADLDFASWFDAAGIRTVPVLLDGRPKLLDATLADPAVLALEPGLRACYVR >Mature_395_residues MERSMAMADVCLQGARAITQAGPSRAAVTIRAGRFGGTLGTGTVRLDLQGHVLAPGLINAHEHLQVNCVPPLPQATPFAN SYAWIESFQAHFQHPDVAAALRVPKAVRLRHGGLKNLLAGVTCVAQHDPWHATLDEANFPVSLLRDFGWSYALGWAGYGP PVQGSFAATLPAHPWMIHLAEGTDAVARAELDELDRLGCLAANTVLIHGVGMGEHDIERVIARGAAVVWCPSSNQALLGR TLDPWRLCMAGRLALGNDSRISGARDLLEELQIASQSGLAPDQLLGMVTGDCARILRMATRGRIAPGATADVLIVRDRGG EPASSIVGCTRSDLRAVIRDGRPRIADLDFASWFDAAGIRTVPVLLDGRPKLLDATLADPAVLALEPGLRACYVR
Specific function: Unknown
COG id: COG0402
COG function: function code FR; Cytosine deaminase and related metal-dependent hydrolases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42048; Mature: 42048
Theoretical pI: Translated: 7.32; Mature: 7.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MERSMAMADVCLQGARAITQAGPSRAAVTIRAGRFGGTLGTGTVRLDLQGHVLAPGLINA CCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCEECCCEEEEEECCCEECCCCCCC HEHLQVNCVPPLPQATPFANSYAWIESFQAHFQHPDVAAALRVPKAVRLRHGGLKNLLAG CCCEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHCCHHHHHHCCCHHHHHHH VTCVAQHDPWHATLDEANFPVSLLRDFGWSYALGWAGYGPPVQGSFAATLPAHPWMIHLA EEEEECCCCCEEECCCCCCCHHHHHHCCCCEEECCCCCCCCCCCCEEEECCCCCEEEEEE EGTDAVARAELDELDRLGCLAANTVLIHGVGMGEHDIERVIARGAAVVWCPSSNQALLGR CCCCHHHHHHHHHHHHHHHHEECEEEEEECCCCHHHHHHHHHCCCEEEEECCCCCEEECC TLDPWRLCMAGRLALGNDSRISGARDLLEELQIASQSGLAPDQLLGMVTGDCARILRMAT CCCHHHHHHHCEEECCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH RGRIAPGATADVLIVRDRGGEPASSIVGCTRSDLRAVIRDGRPRIADLDFASWFDAAGIR CCCCCCCCCEEEEEEECCCCCCHHHHHCCCHHHHHHHHHCCCCCEECCCHHHHHCCCCCE TVPVLLDGRPKLLDATLADPAVLALEPGLRACYVR EEEEEECCCCCEEECCCCCCEEEEECCCCCEEECC >Mature Secondary Structure MERSMAMADVCLQGARAITQAGPSRAAVTIRAGRFGGTLGTGTVRLDLQGHVLAPGLINA CCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCEECCCEEEEEECCCEECCCCCCC HEHLQVNCVPPLPQATPFANSYAWIESFQAHFQHPDVAAALRVPKAVRLRHGGLKNLLAG CCCEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHCCHHHHHHCCCHHHHHHH VTCVAQHDPWHATLDEANFPVSLLRDFGWSYALGWAGYGPPVQGSFAATLPAHPWMIHLA EEEEECCCCCEEECCCCCCCHHHHHHCCCCEEECCCCCCCCCCCCEEEECCCCCEEEEEE EGTDAVARAELDELDRLGCLAANTVLIHGVGMGEHDIERVIARGAAVVWCPSSNQALLGR CCCCHHHHHHHHHHHHHHHHEECEEEEEECCCCHHHHHHHHHCCCEEEEECCCCCEEECC TLDPWRLCMAGRLALGNDSRISGARDLLEELQIASQSGLAPDQLLGMVTGDCARILRMAT CCCHHHHHHHCEEECCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH RGRIAPGATADVLIVRDRGGEPASSIVGCTRSDLRAVIRDGRPRIADLDFASWFDAAGIR CCCCCCCCCEEEEEEECCCCCCHHHHHCCCHHHHHHHHHCCCCCEECCCHHHHHCCCCCE TVPVLLDGRPKLLDATLADPAVLALEPGLRACYVR EEEEEECCCCCEEECCCCCCEEEEECCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA