Definition Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome.
Accession NC_003919
Length 5,175,554

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The map label for this gene is 21242315

Identifier: 21242315

GI number: 21242315

Start: 1807388

End: 1808818

Strand: Direct

Name: 21242315

Synonym: XAC1564

Alternate gene names: NA

Gene position: 1807388-1808818 (Clockwise)

Preceding gene: 21242313

Following gene: 77748594

Centisome position: 34.92

GC content: 66.18

Gene sequence:

>1431_bases
ATGGCAAGCGCGCAAACGCCGCCACCGTCGATCGTGCCGACCGATCGTCTGCAGGAGTCCTGGTGGGCGCAGCGGCATGC
CCAGGTGCTGGAACAGGTCAAGCAGCACCCGGATGCCAAGTTGCTGCTGATCGGCGATTCGATCACCCAAAACTACGAAA
AAGCCAAGGCGCCGGACGAAGACTTCCAGCCGACCTGGCAAACCTTCTACGGTAGCCGCGGCGCACTCAACCTGGGTTTC
AGTGGCGACGGCACCGAAAACGTGTTGTGGCGGCTGGCCAATGGCGAAGTCGACGGGCTGCAGCCGAAGGTCGCGCTGGT
GCTGATCGGCACCAATAACACCGGCCATCTCGGTCAAACCGCCGAGCAGACCCAACTCGGTATCGATGCGGTGGTCGCAG
CGATCGAGCAAAAGCTGCCGCGCACGCACATCCTGCTGCTGAGTGTGTTGCCCAGCGATCTCTCCAGCGAAAAATCGCGG
CGCGATGCGCAGATCAATCAGGGCCTGGCCGTGCGTTACGGCGACAACCCACGCGTGACCTATCTGGATGTGAGCTCGGT
CTTCCAGCGCGACGGCAAGCTGCGCACCGAGCTGTTTTACGACACCCGGTTCCGTCCGGCGGCCGGTGCCTTGCATCCGG
ACACGCGGGGGCAGCGCATGCTGGCCGAAGCGATCGAGCCCACGCTCGCGCGGCTGCTGGGCGAGCCGCCGGTCAAGCCG
GTGGCCGAACTCGGCCGTGACGCGGCGACCTCGCTGATGCCGGTCGACTGGCTGGAGCAGGATTCCTACGACTGGTACGC
ACGCCACCACGCAGCGCTGGCCATCGCGCGCAGCCTGAAGCCGGAGGTAGTGATGATCGGCGACTCGATCACCCATTTCT
GGTCTGGGCCGCCGCAGGCCACGCGCGTCAGTGGCCCCGAATCGTGGCAATGGTTGTATGGCATGCGGCCGGTACTGAAT
CTGGGCTTCGGCTGGGACCGCACGCAAAATGTGCTGTGGCGCATCCGCCAGGGCGAACTCGATGGTCTGGACCCGCGCTG
GGTGGTGCTGCATCTCGGCACCAACAATCTCAGCGGCACGGCGCAATCGCGCGCCAGTACCCCGGCTGAAGCGGCGTTGG
GTGTGCAGGCGGTGGTGAGTGAGGTGCGCCGCCGCCTGCCCAACAGCAAGCTGATCCTGATGGCGATCATGCCGCGTGGC
CGCAACCCCGACGATGCGCGGCGCGCGCCGATCGCCGAGACAAACCGGCTGCTGGTCGCGCGCTATGCCAAGGATCCGGC
GGTGCAGTTGGTCGATATCGGCCCCAGGCTGCTGCAGCCCGACGGCACGCTGCCCGAAGCGCTGATGCCCGATGGCACCC
ATCCCAGCGAATCCGGCTACCGCATCTGGGCACGGGCGCTGCGCGAGGCAGGAATTACCGCTGCGCCGTGA

Upstream 100 bases:

>100_bases
TGCGCGCATGTCCCGGTCTTCGCACGCTGCTTCGTCCCGTGTTTCACGCTCCGGCTTTGCATATACGCTTTGGTGCTGGG
GGCTGCTGCTGTTCTGCACG

Downstream 100 bases:

>100_bases
CGGGGGCGGCGCGCGCGCGTTCGTCGAAAGGCGAGCGCGGCTGGTGAGTGTGGCACTGCGGCCGCCCGCGCGCTGCTGCG
TTGTGCGTGCCGACAGTCGC

Product: acetylhydrolase

Products: NA

Alternate protein names: GDSL Family Lipase; Acetylhydrolase; Mucin-Desulfating Sulfatase; 1-Alkyl-2-Acetylglycerophosphocholine Esterase; Exo-1 4-Beta-Glucosidase; Sialate O-Acetylesterase; Acetylhydrolase Lipase_gdsl Protein; GDSL-Like Lipase/Acylhydrolase Domain-Containing Protein; 1 4-Beta-D-Glucan Glucohydrolase Cel3D; Glycoside Hydrolase Family 3 Domain Protein; Lipolytic G-D-S-L; GDSL-Like Lipase/Acylhydrolase; Lipolytic GDSL Family; Lipase/Acylhydrolase Family Protein; Platelet-Activating Factor Acetylhydrolase IB Gamma Subunit

Number of amino acids: Translated: 476; Mature: 475

Protein sequence:

>476_residues
MASAQTPPPSIVPTDRLQESWWAQRHAQVLEQVKQHPDAKLLLIGDSITQNYEKAKAPDEDFQPTWQTFYGSRGALNLGF
SGDGTENVLWRLANGEVDGLQPKVALVLIGTNNTGHLGQTAEQTQLGIDAVVAAIEQKLPRTHILLLSVLPSDLSSEKSR
RDAQINQGLAVRYGDNPRVTYLDVSSVFQRDGKLRTELFYDTRFRPAAGALHPDTRGQRMLAEAIEPTLARLLGEPPVKP
VAELGRDAATSLMPVDWLEQDSYDWYARHHAALAIARSLKPEVVMIGDSITHFWSGPPQATRVSGPESWQWLYGMRPVLN
LGFGWDRTQNVLWRIRQGELDGLDPRWVVLHLGTNNLSGTAQSRASTPAEAALGVQAVVSEVRRRLPNSKLILMAIMPRG
RNPDDARRAPIAETNRLLVARYAKDPAVQLVDIGPRLLQPDGTLPEALMPDGTHPSESGYRIWARALREAGITAAP

Sequences:

>Translated_476_residues
MASAQTPPPSIVPTDRLQESWWAQRHAQVLEQVKQHPDAKLLLIGDSITQNYEKAKAPDEDFQPTWQTFYGSRGALNLGF
SGDGTENVLWRLANGEVDGLQPKVALVLIGTNNTGHLGQTAEQTQLGIDAVVAAIEQKLPRTHILLLSVLPSDLSSEKSR
RDAQINQGLAVRYGDNPRVTYLDVSSVFQRDGKLRTELFYDTRFRPAAGALHPDTRGQRMLAEAIEPTLARLLGEPPVKP
VAELGRDAATSLMPVDWLEQDSYDWYARHHAALAIARSLKPEVVMIGDSITHFWSGPPQATRVSGPESWQWLYGMRPVLN
LGFGWDRTQNVLWRIRQGELDGLDPRWVVLHLGTNNLSGTAQSRASTPAEAALGVQAVVSEVRRRLPNSKLILMAIMPRG
RNPDDARRAPIAETNRLLVARYAKDPAVQLVDIGPRLLQPDGTLPEALMPDGTHPSESGYRIWARALREAGITAAP
>Mature_475_residues
ASAQTPPPSIVPTDRLQESWWAQRHAQVLEQVKQHPDAKLLLIGDSITQNYEKAKAPDEDFQPTWQTFYGSRGALNLGFS
GDGTENVLWRLANGEVDGLQPKVALVLIGTNNTGHLGQTAEQTQLGIDAVVAAIEQKLPRTHILLLSVLPSDLSSEKSRR
DAQINQGLAVRYGDNPRVTYLDVSSVFQRDGKLRTELFYDTRFRPAAGALHPDTRGQRMLAEAIEPTLARLLGEPPVKPV
AELGRDAATSLMPVDWLEQDSYDWYARHHAALAIARSLKPEVVMIGDSITHFWSGPPQATRVSGPESWQWLYGMRPVLNL
GFGWDRTQNVLWRIRQGELDGLDPRWVVLHLGTNNLSGTAQSRASTPAEAALGVQAVVSEVRRRLPNSKLILMAIMPRGR
NPDDARRAPIAETNRLLVARYAKDPAVQLVDIGPRLLQPDGTLPEALMPDGTHPSESGYRIWARALREAGITAAP

Specific function: Unknown

COG id: COG2755

COG function: function code E; Lysophospholipase L1 and related esterases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI225543099, Length=214, Percent_Identity=32.2429906542056, Blast_Score=112, Evalue=9e-25,
Organism=Homo sapiens, GI225543097, Length=214, Percent_Identity=32.2429906542056, Blast_Score=112, Evalue=9e-25,
Organism=Homo sapiens, GI4505587, Length=214, Percent_Identity=32.2429906542056, Blast_Score=112, Evalue=9e-25,
Organism=Homo sapiens, GI4505585, Length=205, Percent_Identity=30.7317073170732, Blast_Score=110, Evalue=4e-24,
Organism=Homo sapiens, GI296080768, Length=143, Percent_Identity=33.5664335664336, Blast_Score=84, Evalue=4e-16,
Organism=Homo sapiens, GI296080766, Length=127, Percent_Identity=36.2204724409449, Blast_Score=82, Evalue=1e-15,
Organism=Homo sapiens, GI296080770, Length=123, Percent_Identity=35.7723577235772, Blast_Score=77, Evalue=3e-14,
Organism=Drosophila melanogaster, GI24642291, Length=197, Percent_Identity=31.4720812182741, Blast_Score=104, Evalue=1e-22,
Organism=Drosophila melanogaster, GI24642289, Length=197, Percent_Identity=31.4720812182741, Blast_Score=104, Evalue=1e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 52538; Mature: 52407

Theoretical pI: Translated: 7.10; Mature: 7.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASAQTPPPSIVPTDRLQESWWAQRHAQVLEQVKQHPDAKLLLIGDSITQNYEKAKAPDE
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHCCCCC
DFQPTWQTFYGSRGALNLGFSGDGTENVLWRLANGEVDGLQPKVALVLIGTNNTGHLGQT
CCCCHHHHHCCCCCCEEECCCCCCCHHHEEEECCCCCCCCCCEEEEEEEECCCCCCCCCC
AEQTQLGIDAVVAAIEQKLPRTHILLLSVLPSDLSSEKSRRDAQINQGLAVRYGDNPRVT
HHHHHHHHHHHHHHHHHHCCHHEEEEEHHCCCHHHHHHHHHHHHHCCCEEEEECCCCCEE
YLDVSSVFQRDGKLRTELFYDTRFRPAAGALHPDTRGQRMLAEAIEPTLARLLGEPPVKP
EEEHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCH
VAELGRDAATSLMPVDWLEQDSYDWYARHHAALAIARSLKPEVVMIGDSITHFWSGPPQA
HHHCCCHHHHHCCCCHHHCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCHHHHCCCCCCC
TRVSGPESWQWLYGMRPVLNLGFGWDRTQNVLWRIRQGELDGLDPRWVVLHLGTNNLSGT
CCCCCCCCCHHHHCCCHHHHCCCCCCHHHHHHHEECCCCCCCCCCCEEEEEECCCCCCCC
AQSRASTPAEAALGVQAVVSEVRRRLPNSKLILMAIMPRGRNPDDARRAPIAETNRLLVA
CHHHCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHCCCCCCCCCEEEE
RYAKDPAVQLVDIGPRLLQPDGTLPEALMPDGTHPSESGYRIWARALREAGITAAP
EECCCCCEEEEECCCEEECCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
ASAQTPPPSIVPTDRLQESWWAQRHAQVLEQVKQHPDAKLLLIGDSITQNYEKAKAPDE
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHCCCCC
DFQPTWQTFYGSRGALNLGFSGDGTENVLWRLANGEVDGLQPKVALVLIGTNNTGHLGQT
CCCCHHHHHCCCCCCEEECCCCCCCHHHEEEECCCCCCCCCCEEEEEEEECCCCCCCCCC
AEQTQLGIDAVVAAIEQKLPRTHILLLSVLPSDLSSEKSRRDAQINQGLAVRYGDNPRVT
HHHHHHHHHHHHHHHHHHCCHHEEEEEHHCCCHHHHHHHHHHHHHCCCEEEEECCCCCEE
YLDVSSVFQRDGKLRTELFYDTRFRPAAGALHPDTRGQRMLAEAIEPTLARLLGEPPVKP
EEEHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCH
VAELGRDAATSLMPVDWLEQDSYDWYARHHAALAIARSLKPEVVMIGDSITHFWSGPPQA
HHHCCCHHHHHCCCCHHHCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCHHHHCCCCCCC
TRVSGPESWQWLYGMRPVLNLGFGWDRTQNVLWRIRQGELDGLDPRWVVLHLGTNNLSGT
CCCCCCCCCHHHHCCCHHHHCCCCCCHHHHHHHEECCCCCCCCCCCEEEEEECCCCCCCC
AQSRASTPAEAALGVQAVVSEVRRRLPNSKLILMAIMPRGRNPDDARRAPIAETNRLLVA
CHHHCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHCCCCCCCCCEEEE
RYAKDPAVQLVDIGPRLLQPDGTLPEALMPDGTHPSESGYRIWARALREAGITAAP
EECCCCCEEEEECCCEEECCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA