| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is paaF [C]
Identifier: 21242068
GI number: 21242068
Start: 1518118
End: 1519272
Strand: Direct
Name: paaF [C]
Synonym: XAC1315
Alternate gene names: 21242068
Gene position: 1518118-1519272 (Clockwise)
Preceding gene: 21242067
Following gene: 21242069
Centisome position: 29.33
GC content: 64.85
Gene sequence:
>1155_bases GTGCTGTTCGAGCAGCGTGCGTGCGCCGATGGGCACCGTATCGGCATCGCTACCTTGAATGCGCCCAAGACGCTCAATGG CCTGTCGTTACAGATGACGCGGCTGCTGGATGCGCAGTTACGTGTCTGGGCTGAGGATACGCAGATCGCCTGCGTGGTAT TGCGTGGCGCCGGCGACAAAGCGTTCTGCGCTGGTGGCGATCTGCATGGCCTGTACCAGAGCATGCGCGCGCACCGCGAT GCAGTGCCCGACGCTGCAGCGCGACGCGCAGCGCCGCAGGCCAACGTGCATGCTGCGGCATTTTTCGAGGAGGAATACCG GCTCGACTACCGCATCCATACCTATCCGAAGCCGCTGCTGTGTTGGGGCCACGGTATCGTGATGGGCGGTGGCATCGGCC TGATGTCCGGCGCTAGCCATCGCGTGGTCACCGAACGCTCGCGCCTTGCCATGCCGGAGATCAGCGTCGGCTTGTTCCCG GATGTGGGTGGCAGCTGGTTGTTGCGTCGCGTGCCCCAGGGTGCTGGCCTGTTTCTGGCGCTGACTGGTGCGCCGCTGGA TGCCAGCGATGCGATGTACGCGGGGCTAGCAGATGTGCGCCTGGAGCATGCGCAGTACGTAGCGGTGCTGGATGCGCTAA GCGCGCACGCATGGACAGGCAATGCCGACGACGACCGCACCCAGCTCGGCGCATTCCTGCATGGCATCGCGCAACCGACC GAACCGGGCCCGTTGCAGCTCCACGCGCAGTTGATCGAACGCCTGGTATCCAGCGAGTCACTGGAGCACATCGTCGCTGC AATCATGGCGCTGCAAAGCGAAGACAGCTGGCTGCAGGCCGCACGCGCCACCTTGGCGGCCGGTGCTCCTGGATCGGCGC GCCTGGCCTGGGAGCTGTATCGCCGTCCGGGCACCACGACGCTGGCCGACACCTTTCGGACCGAATACGTGGTCGCATTG CATGTGGCGGCGCATGGCGATTTTGCCGAAGGCATCCGCGCGCTGTTGATCGATAAGGATCGTCAACCGCGTTGGCAGCC TGGATCGCTGGAAGAAGCCGATGCGCAGTGGGCCGCAGACTTCTTTGTCGCGCCCTGGTCGCCTGCATCGCATCCGCTTG CCGATCTGGGGGCAGGCGAGTTGGGTGTGCATTGA
Upstream 100 bases:
>100_bases ACGCCGATCAGGCCGAAGGCGTGGCCGCATTTCTGGACAAGCGCGCGCCGCAGTGGAGCAACCGCTGATGGCGCAGGTCA GCGCAACCGACGAGGCAGCG
Downstream 100 bases:
>100_bases GTGGCTGGCAACTTGCGAAGTACGTTCGGCTCACGCCGGATTGCAGCGCGGTTGCCATGTCGCACCTGCGTCGTCGCAGC TGAAAACCGGCGGTGGCTCC
Product: enoyl-CoA hydratase
Products: NA
Alternate protein names: 3-hydroxypropionyl-CoA dehydratase [H]
Number of amino acids: Translated: 384; Mature: 384
Protein sequence:
>384_residues MLFEQRACADGHRIGIATLNAPKTLNGLSLQMTRLLDAQLRVWAEDTQIACVVLRGAGDKAFCAGGDLHGLYQSMRAHRD AVPDAAARRAAPQANVHAAAFFEEEYRLDYRIHTYPKPLLCWGHGIVMGGGIGLMSGASHRVVTERSRLAMPEISVGLFP DVGGSWLLRRVPQGAGLFLALTGAPLDASDAMYAGLADVRLEHAQYVAVLDALSAHAWTGNADDDRTQLGAFLHGIAQPT EPGPLQLHAQLIERLVSSESLEHIVAAIMALQSEDSWLQAARATLAAGAPGSARLAWELYRRPGTTTLADTFRTEYVVAL HVAAHGDFAEGIRALLIDKDRQPRWQPGSLEEADAQWAADFFVAPWSPASHPLADLGAGELGVH
Sequences:
>Translated_384_residues MLFEQRACADGHRIGIATLNAPKTLNGLSLQMTRLLDAQLRVWAEDTQIACVVLRGAGDKAFCAGGDLHGLYQSMRAHRD AVPDAAARRAAPQANVHAAAFFEEEYRLDYRIHTYPKPLLCWGHGIVMGGGIGLMSGASHRVVTERSRLAMPEISVGLFP DVGGSWLLRRVPQGAGLFLALTGAPLDASDAMYAGLADVRLEHAQYVAVLDALSAHAWTGNADDDRTQLGAFLHGIAQPT EPGPLQLHAQLIERLVSSESLEHIVAAIMALQSEDSWLQAARATLAAGAPGSARLAWELYRRPGTTTLADTFRTEYVVAL HVAAHGDFAEGIRALLIDKDRQPRWQPGSLEEADAQWAADFFVAPWSPASHPLADLGAGELGVH >Mature_384_residues MLFEQRACADGHRIGIATLNAPKTLNGLSLQMTRLLDAQLRVWAEDTQIACVVLRGAGDKAFCAGGDLHGLYQSMRAHRD AVPDAAARRAAPQANVHAAAFFEEEYRLDYRIHTYPKPLLCWGHGIVMGGGIGLMSGASHRVVTERSRLAMPEISVGLFP DVGGSWLLRRVPQGAGLFLALTGAPLDASDAMYAGLADVRLEHAQYVAVLDALSAHAWTGNADDDRTQLGAFLHGIAQPT EPGPLQLHAQLIERLVSSESLEHIVAAIMALQSEDSWLQAARATLAAGAPGSARLAWELYRRPGTTTLADTFRTEYVVAL HVAAHGDFAEGIRALLIDKDRQPRWQPGSLEEADAQWAADFFVAPWSPASHPLADLGAGELGVH
Specific function: Plays a role in autotrophic carbon fixation via the 3- hydroxypropionate/4-hydroxybutyrate cycle. Catalyzes the reversible dehydration of 3-hydroxypropionyl-CoA to form acryloyl- CoA, and the reversible dehydration of (S)-3-hydroxybutyryl-CoA to form crot
COG id: COG1024
COG function: function code I; Enoyl-CoA hydratase/carnithine racemase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the enoyl-CoA hydratase/isomerase family [H]
Homologues:
Organism=Homo sapiens, GI37594471, Length=362, Percent_Identity=30.939226519337, Blast_Score=189, Evalue=5e-48, Organism=Homo sapiens, GI37594469, Length=316, Percent_Identity=30.0632911392405, Blast_Score=153, Evalue=3e-37, Organism=Escherichia coli, GI1787659, Length=204, Percent_Identity=28.4313725490196, Blast_Score=67, Evalue=1e-12, Organism=Escherichia coli, GI1787660, Length=175, Percent_Identity=32.5714285714286, Blast_Score=65, Evalue=8e-12, Organism=Caenorhabditis elegans, GI25144157, Length=350, Percent_Identity=35.1428571428571, Blast_Score=205, Evalue=4e-53, Organism=Caenorhabditis elegans, GI25144160, Length=350, Percent_Identity=35.1428571428571, Blast_Score=204, Evalue=5e-53, Organism=Saccharomyces cerevisiae, GI6320241, Length=359, Percent_Identity=26.7409470752089, Blast_Score=123, Evalue=6e-29, Organism=Drosophila melanogaster, GI28571730, Length=348, Percent_Identity=34.1954022988506, Blast_Score=189, Evalue=3e-48, Organism=Drosophila melanogaster, GI28571729, Length=348, Percent_Identity=34.1954022988506, Blast_Score=189, Evalue=4e-48,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014748 - InterPro: IPR001753 - InterPro: IPR018376 [H]
Pfam domain/function: PF00378 ECH [H]
EC number: =4.2.1.116 [H]
Molecular weight: Translated: 41302; Mature: 41302
Theoretical pI: Translated: 6.07; Mature: 6.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLFEQRACADGHRIGIATLNAPKTLNGLSLQMTRLLDAQLRVWAEDTQIACVVLRGAGDK CCCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHEEEECCCEEEEEEEECCCCC AFCAGGDLHGLYQSMRAHRDAVPDAAARRAAPQANVHAAAFFEEEYRLDYRIHTYPKPLL EEECCCCHHHHHHHHHHHHHCCCCHHHHHCCCCCCCEEEEEEHHHHEEEEEEECCCCCEE CWGHGIVMGGGIGLMSGASHRVVTERSRLAMPEISVGLFPDVGGSWLLRRVPQGAGLFLA EECCCEEEECCCCCCCCCCCCEEEHHHHCCCCCCCEECCCCCCHHHHHHHCCCCCCEEEE LTGAPLDASDAMYAGLADVRLEHAQYVAVLDALSAHAWTGNADDDRTQLGAFLHGIAQPT EECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCC EPGPLQLHAQLIERLVSSESLEHIVAAIMALQSEDSWLQAARATLAAGAPGSARLAWELY CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHH RRPGTTTLADTFRTEYVVALHVAAHGDFAEGIRALLIDKDRQPRWQPGSLEEADAQWAAD HCCCCCHHHHHHCCEEEEEEEEEECCCHHHHHHEEEECCCCCCCCCCCCCCHHCHHHHHH FFVAPWSPASHPLADLGAGELGVH EEEECCCCCCCCHHHCCCCCCCCC >Mature Secondary Structure MLFEQRACADGHRIGIATLNAPKTLNGLSLQMTRLLDAQLRVWAEDTQIACVVLRGAGDK CCCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHEEEECCCEEEEEEEECCCCC AFCAGGDLHGLYQSMRAHRDAVPDAAARRAAPQANVHAAAFFEEEYRLDYRIHTYPKPLL EEECCCCHHHHHHHHHHHHHCCCCHHHHHCCCCCCCEEEEEEHHHHEEEEEEECCCCCEE CWGHGIVMGGGIGLMSGASHRVVTERSRLAMPEISVGLFPDVGGSWLLRRVPQGAGLFLA EECCCEEEECCCCCCCCCCCCEEEHHHHCCCCCCCEECCCCCCHHHHHHHCCCCCCEEEE LTGAPLDASDAMYAGLADVRLEHAQYVAVLDALSAHAWTGNADDDRTQLGAFLHGIAQPT EECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCC EPGPLQLHAQLIERLVSSESLEHIVAAIMALQSEDSWLQAARATLAAGAPGSARLAWELY CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHH RRPGTTTLADTFRTEYVVALHVAAHGDFAEGIRALLIDKDRQPRWQPGSLEEADAQWAAD HCCCCCHHHHHHCCEEEEEEEEEECCCHHHHHHEEEECCCCCCCCCCCCCCHHCHHHHHH FFVAPWSPASHPLADLGAGELGVH EEEECCCCCCCCHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA