| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is yhaI [H]
Identifier: 21242017
GI number: 21242017
Start: 1443964
End: 1444350
Strand: Direct
Name: yhaI [H]
Synonym: XAC1264
Alternate gene names: 21242017
Gene position: 1443964-1444350 (Clockwise)
Preceding gene: 21242016
Following gene: 21242019
Centisome position: 27.9
GC content: 59.95
Gene sequence:
>387_bases ATGGAATGGATGTTGCTGCCGCTCAAGCGCTACGCCGACTTCAACGGTCGCTCGCGTCGCAAGGAATACTGGATGTTCGC GCTGATGCAGTTCCTGGTGCTGTTCGTGTTTGGCGGCCTGTTTGCCGTTGCCGCAGTGGCGATGGGGAACGAGAACGGCC CTGGCGCGCTGGCTTGGCTGATCTGTGCGGTCATGGTGATCGCTTGTCTGGCGTTGATCGTGCCCGGCATTGCAGTCACG GTGCGCCGCCTGCACGACCAGGACAAGTCCGGCTGGTTTTACCTGATCAGCCTGGTGCCGTATGTTGGCGCTTTCGTGTT GCTGGTCTTCATGTGCATCGAAGGCACGCCCGGCCCGAACCAATACGGCGAAAATCCCAAGCAGTAA
Upstream 100 bases:
>100_bases AGCGTTTTCAGAAAGAGTGAGGCTATGGCAACATGCGCGGCCCGTTGCACTGTGCACCGGATCACAGACACCGCTCACTG CCGTTTTCAGGAGAATCACG
Downstream 100 bases:
>100_bases CTCGCGCGTTATGAAAGCGGACAACGGCGCAGGGGTCTCCCTGCGCCGTTGTCGTTTGTGAGTGCGCCAACGGTGCCATT GCGCGTCGCCCATAGGCGGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 128; Mature: 128
Protein sequence:
>128_residues MEWMLLPLKRYADFNGRSRRKEYWMFALMQFLVLFVFGGLFAVAAVAMGNENGPGALAWLICAVMVIACLALIVPGIAVT VRRLHDQDKSGWFYLISLVPYVGAFVLLVFMCIEGTPGPNQYGENPKQ
Sequences:
>Translated_128_residues MEWMLLPLKRYADFNGRSRRKEYWMFALMQFLVLFVFGGLFAVAAVAMGNENGPGALAWLICAVMVIACLALIVPGIAVT VRRLHDQDKSGWFYLISLVPYVGAFVLLVFMCIEGTPGPNQYGENPKQ >Mature_128_residues MEWMLLPLKRYADFNGRSRRKEYWMFALMQFLVLFVFGGLFAVAAVAMGNENGPGALAWLICAVMVIACLALIVPGIAVT VRRLHDQDKSGWFYLISLVPYVGAFVLLVFMCIEGTPGPNQYGENPKQ
Specific function: Unknown
COG id: COG3152
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To E.coli yhaH [H]
Homologues:
Organism=Escherichia coli, GI1789491, Length=127, Percent_Identity=42.5196850393701, Blast_Score=102, Evalue=6e-24, Organism=Escherichia coli, GI2367196, Length=127, Percent_Identity=40.9448818897638, Blast_Score=99, Evalue=9e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008523 [H]
Pfam domain/function: PF05656 DUF805 [H]
EC number: NA
Molecular weight: Translated: 14322; Mature: 14322
Theoretical pI: Translated: 8.47; Mature: 8.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 5.5 %Met (Translated Protein) 7.8 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 5.5 %Met (Mature Protein) 7.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEWMLLPLKRYADFNGRSRRKEYWMFALMQFLVLFVFGGLFAVAAVAMGNENGPGALAWL CCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH ICAVMVIACLALIVPGIAVTVRRLHDQDKSGWFYLISLVPYVGAFVLLVFMCIEGTPGPN HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC QYGENPKQ CCCCCCCC >Mature Secondary Structure MEWMLLPLKRYADFNGRSRRKEYWMFALMQFLVLFVFGGLFAVAAVAMGNENGPGALAWL CCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH ICAVMVIACLALIVPGIAVTVRRLHDQDKSGWFYLISLVPYVGAFVLLVFMCIEGTPGPN HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC QYGENPKQ CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]