| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
Click here to switch to the map view.
The map label for this gene is 21241951
Identifier: 21241951
GI number: 21241951
Start: 1362978
End: 1363586
Strand: Direct
Name: 21241951
Synonym: XAC1197
Alternate gene names: NA
Gene position: 1362978-1363586 (Clockwise)
Preceding gene: 21241950
Following gene: 21241952
Centisome position: 26.33
GC content: 70.44
Gene sequence:
>609_bases GTGGCACTGCCGCTGGACGCCCTGCTCGCCGCGCGCACCGTCTGGCGTGCAGGCCAGGGCACGGCCACCGCCAATGGCGG CGAATCCACCGGGCATGTGGCATTGGATGCGTTGCTGCCCGATGGCGGCTGGCCGCGGCGTGCCTTGACCGAGTTGTTGT TGCCTGCGCATGGCATCGGCGAGATCGCCTTGTTGCTGCCCACGCTGGCACGCATGACCGCCAGCAGCAGCCGGGTCGTG CTGGTCGCGCCGCCGTTCATTCCTTACGCGCCGGCCTGGCAGGCGGGCGGGGTGGTGCTGGAGCATCTGGAAGTGGTGCA GGCCGAGCCGCGCGAAGCGTTATGGGCGTTCGAACAATGCTTGCGCAGCGGCGCATGCGCTGCGGTACTGGGCTGGCCGC AAACCGGCGATGCGCGTGCGCTGCGCCGGTTGCAGGTCGCGGCCGATAGCGGCAATTGCTGCGCCTTCGCACTGCGCGAC CGCCGTCATGCGGTGAATGCATCGCCGGCGGCCTTGCGGCTGGAATTCCTGCCCGAGCGCGATGCCTGGCAGGTGCGCAA GTGCCGCGGCGGGCAGGTACCGTCGCAGCCGCTGCGGCTGGCGCATTGA
Upstream 100 bases:
>100_bases GATGCCGACTTCGCGATCGAAGGGCTGTACTGCGGCCTGATCCGGCAGGGCTGAGATGAGCCAGGAGCCGGCGCGCATCA GCCAGGACGGCAATGCGGCA
Downstream 100 bases:
>100_bases GGCGCGCGCATGTTGTGGGCCTGCATAGTGCTGCCGCAGCTGGCGCTGGACGCCGTCCTTCGGCGTCTGGAAGCGCCGCA GGCGCCGCTGGTGCTGGTGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 202; Mature: 201
Protein sequence:
>202_residues MALPLDALLAARTVWRAGQGTATANGGESTGHVALDALLPDGGWPRRALTELLLPAHGIGEIALLLPTLARMTASSSRVV LVAPPFIPYAPAWQAGGVVLEHLEVVQAEPREALWAFEQCLRSGACAAVLGWPQTGDARALRRLQVAADSGNCCAFALRD RRHAVNASPAALRLEFLPERDAWQVRKCRGGQVPSQPLRLAH
Sequences:
>Translated_202_residues MALPLDALLAARTVWRAGQGTATANGGESTGHVALDALLPDGGWPRRALTELLLPAHGIGEIALLLPTLARMTASSSRVV LVAPPFIPYAPAWQAGGVVLEHLEVVQAEPREALWAFEQCLRSGACAAVLGWPQTGDARALRRLQVAADSGNCCAFALRD RRHAVNASPAALRLEFLPERDAWQVRKCRGGQVPSQPLRLAH >Mature_201_residues ALPLDALLAARTVWRAGQGTATANGGESTGHVALDALLPDGGWPRRALTELLLPAHGIGEIALLLPTLARMTASSSRVVL VAPPFIPYAPAWQAGGVVLEHLEVVQAEPREALWAFEQCLRSGACAAVLGWPQTGDARALRRLQVAADSGNCCAFALRDR RHAVNASPAALRLEFLPERDAWQVRKCRGGQVPSQPLRLAH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21539; Mature: 21408
Theoretical pI: Translated: 8.52; Mature: 8.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALPLDALLAARTVWRAGQGTATANGGESTGHVALDALLPDGGWPRRALTELLLPAHGIG CCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHCCCCCHH EIALLLPTLARMTASSSRVVLVAPPFIPYAPAWQAGGVVLEHLEVVQAEPREALWAFEQC HHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHH LRSGACAAVLGWPQTGDARALRRLQVAADSGNCCAFALRDRRHAVNASPAALRLEFLPER HHCCCEEEEECCCCCCHHHHHHHHHHCCCCCCEEEEEEHHHHHHCCCCCCEEEEEECCCC DAWQVRKCRGGQVPSQPLRLAH CCHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure ALPLDALLAARTVWRAGQGTATANGGESTGHVALDALLPDGGWPRRALTELLLPAHGIG CCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHCCCCCHH EIALLLPTLARMTASSSRVVLVAPPFIPYAPAWQAGGVVLEHLEVVQAEPREALWAFEQC HHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHH LRSGACAAVLGWPQTGDARALRRLQVAADSGNCCAFALRDRRHAVNASPAALRLEFLPER HHCCCEEEEECCCCCCHHHHHHHHHHCCCCCCEEEEEEHHHHHHCCCCCCEEEEEECCCC DAWQVRKCRGGQVPSQPLRLAH CCHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA