| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21241873
Identifier: 21241873
GI number: 21241873
Start: 1269678
End: 1270742
Strand: Direct
Name: 21241873
Synonym: XAC1118
Alternate gene names: NA
Gene position: 1269678-1270742 (Clockwise)
Preceding gene: 21241872
Following gene: 21241874
Centisome position: 24.53
GC content: 64.88
Gene sequence:
>1065_bases ATGGCCGCGACGGCAGCGTCGAGGATTGGTGGGAGCAGCCCCTTACCGTTTCAGCACCTCAGAGCACGCGATGACCGATG CCATGCCTGTTGCCCATCCCGCGCCGGTGCCCGGGATTCGAATCGCCGTGCTGGTGCCGTGCCACAACGAAGCGGCGACT GTCGCTGCGGTCGTCGGCAATTTTTCTGCCGCTTTGCCGGGTGCGGTGATTCATGTGCTGGACAACAATTCCAGCGATGC CACCGCAGCGATCGCCGCGGCGGCAGGCGCCCAGGTCTGTCGTGTCGCATTGCAGGGCAAGGCAACGTGGTACGGCGTGG ATTTGCCGATGTCGAGGCCGACATCTACGTGTTGGTCGATGGCGACGCCACCTACGATGCCGCCGCCGCGCCGGCGCTGG TGCGCAAGCTGGTCGACGAGCGCCTGGACATGGTGGTCGGTGCGCGGCGCGATCAGCAGCAGGCCGCGTATCGGCCGGGG CATCGGTTGGGCAACGTCTTGCTGACGCGCTGCGCGGGGCTGCTGTTCGGCCGCAGCTTCGACGACATGCTGTCCGGCTA CCGGGTGTTCTCGCGGCGCTACGTCAAATCGTTCGCCGCCCACGCGCAGGGCTTCGAGACCGAAACCGAACTGGCCGTGC ATGCCTTGCAGCTGCGCATGCCGGTGGCCGAGGTCGAAACCGCCTATGGCGTGCGTCCGGAAGGCTCGCAAAGCAAGTTG AACACCTGGCGCGATGGCTGGCGCATCCTCGTCACGATCGTCAAATTGTTCAAGGCCGAGCGGCCGTTACTGTTCTTCTC GATCGGCTTCGTGCTCAGCGCCACATTGTCGGTGGTGCTGGCGATCCCCTTGTTCGAGACCTATTTCCAGACCGGGCTGG TGCCGCGCTTCCCCACTGCAATTCTGTGCGTGGCGCTGATGCTGCTCGGCTTCCTGCTGCTGGCCTGCGGTCTGATTCTG GATACCGTCACGCGTGGACGGGTGGAGGCCAAGCATCTGGCGTATTTGTCCGAGCCGGGCGTCGGCAGGCTGGTCGCGGT AGAAGACAACAAGGAACGTCGCTGA
Upstream 100 bases:
>100_bases AAAATCTCCACCGACCCGCAGCATCCCAACGTCGGCTTCACTGCAACGCTCGACACCCACGCCTTGCCGCCCGGCACGCA CTGGCTGGGCCTGCGCCTGC
Downstream 100 bases:
>100_bases TGGCATCGATTGCGGGCTCTGCACCTGTTGCGCGGCGGCAGCGTGTGTTGCGGTGGGCAGATCGCTGGTTCGGGTTTCAT TCGCGGCGCCAGATCGCATC
Product: hypothetical protein
Products: NA
Alternate protein names: ORF10X9 [H]
Number of amino acids: Translated: 354; Mature: 353
Protein sequence:
>354_residues MAATAASRIGGSSPLPFQHLRARDDRCHACCPSRAGARDSNRRAGAVPQRSGDCRCGRRQFFCRFAGCGDSCAGQQFQRC HRSDRRGGRRPGLSCRIAGQGNVVRRGFADVEADIYVLVDGDATYDAAAAPALVRKLVDERLDMVVGARRDQQQAAYRPG HRLGNVLLTRCAGLLFGRSFDDMLSGYRVFSRRYVKSFAAHAQGFETETELAVHALQLRMPVAEVETAYGVRPEGSQSKL NTWRDGWRILVTIVKLFKAERPLLFFSIGFVLSATLSVVLAIPLFETYFQTGLVPRFPTAILCVALMLLGFLLLACGLIL DTVTRGRVEAKHLAYLSEPGVGRLVAVEDNKERR
Sequences:
>Translated_354_residues MAATAASRIGGSSPLPFQHLRARDDRCHACCPSRAGARDSNRRAGAVPQRSGDCRCGRRQFFCRFAGCGDSCAGQQFQRC HRSDRRGGRRPGLSCRIAGQGNVVRRGFADVEADIYVLVDGDATYDAAAAPALVRKLVDERLDMVVGARRDQQQAAYRPG HRLGNVLLTRCAGLLFGRSFDDMLSGYRVFSRRYVKSFAAHAQGFETETELAVHALQLRMPVAEVETAYGVRPEGSQSKL NTWRDGWRILVTIVKLFKAERPLLFFSIGFVLSATLSVVLAIPLFETYFQTGLVPRFPTAILCVALMLLGFLLLACGLIL DTVTRGRVEAKHLAYLSEPGVGRLVAVEDNKERR >Mature_353_residues AATAASRIGGSSPLPFQHLRARDDRCHACCPSRAGARDSNRRAGAVPQRSGDCRCGRRQFFCRFAGCGDSCAGQQFQRCH RSDRRGGRRPGLSCRIAGQGNVVRRGFADVEADIYVLVDGDATYDAAAAPALVRKLVDERLDMVVGARRDQQQAAYRPGH RLGNVLLTRCAGLLFGRSFDDMLSGYRVFSRRYVKSFAAHAQGFETETELAVHALQLRMPVAEVETAYGVRPEGSQSKLN TWRDGWRILVTIVKLFKAERPLLFFSIGFVLSATLSVVLAIPLFETYFQTGLVPRFPTAILCVALMLLGFLLLACGLILD TVTRGRVEAKHLAYLSEPGVGRLVAVEDNKERR
Specific function: Unknown
COG id: COG0463
COG function: function code M; Glycosyltransferases involved in cell wall biogenesis
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38997; Mature: 38866
Theoretical pI: Translated: 9.97; Mature: 9.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 3.7 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAATAASRIGGSSPLPFQHLRARDDRCHACCPSRAGARDSNRRAGAVPQRSGDCRCGRRQ CCCCCHHHCCCCCCCCHHHHHCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH FFCRFAGCGDSCAGQQFQRCHRSDRRGGRRPGLSCRIAGQGNVVRRGFADVEADIYVLVD HHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEECCCCCHHHCCCCCCCCCEEEEEC GDATYDAAAAPALVRKLVDERLDMVVGARRDQQQAAYRPGHRLGNVLLTRCAGLLFGRSF CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHCCCH DDMLSGYRVFSRRYVKSFAAHAQGFETETELAVHALQLRMPVAEVETAYGVRPEGSQSKL HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHCCCCCCCCHHHH NTWRDGWRILVTIVKLFKAERPLLFFSIGFVLSATLSVVLAIPLFETYFQTGLVPRFPTA HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH ILCVALMLLGFLLLACGLILDTVTRGRVEAKHLAYLSEPGVGRLVAVEDNKERR HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCEEEEECCCCCCC >Mature Secondary Structure AATAASRIGGSSPLPFQHLRARDDRCHACCPSRAGARDSNRRAGAVPQRSGDCRCGRRQ CCCCHHHCCCCCCCCHHHHHCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH FFCRFAGCGDSCAGQQFQRCHRSDRRGGRRPGLSCRIAGQGNVVRRGFADVEADIYVLVD HHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEECCCCCHHHCCCCCCCCCEEEEEC GDATYDAAAAPALVRKLVDERLDMVVGARRDQQQAAYRPGHRLGNVLLTRCAGLLFGRSF CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHCCCH DDMLSGYRVFSRRYVKSFAAHAQGFETETELAVHALQLRMPVAEVETAYGVRPEGSQSKL HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHCCCCCCCCHHHH NTWRDGWRILVTIVKLFKAERPLLFFSIGFVLSATLSVVLAIPLFETYFQTGLVPRFPTA HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH ILCVALMLLGFLLLACGLILDTVTRGRVEAKHLAYLSEPGVGRLVAVEDNKERR HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7507920; 12384590; 12704152 [H]