| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21241872
Identifier: 21241872
GI number: 21241872
Start: 1267874
End: 1269751
Strand: Direct
Name: 21241872
Synonym: XAC1117
Alternate gene names: NA
Gene position: 1267874-1269751 (Clockwise)
Preceding gene: 21241867
Following gene: 21241873
Centisome position: 24.5
GC content: 67.2
Gene sequence:
>1878_bases GTGGAAAGAAGAGTGCACAGGGCAATGCAGGGGGACCAACGCGCACATCGCACCTTCGTGATCCTGTGGACACTGGCGAC AGCCGTCAAGCTGTTGATCGCCGCACGCTTGCCGCTATTCGTTGACGAGGCCTTCTACTGGCAGGAAGGCCAGCATCTGG CGGCGGCGTATTCGGATCTGCCGGGCATGACCGCCTGGCTGGCGCGGCTGGGCGTGGAGCTGGGCGGACATCATCTGCTG GCGTTGCGGCTGCCGTTTCTGGCCATTTCCGCGCTGATTCCCTGGTTGATCGCGCATATCGCCACGCGCTGGTTCGGCTC CACGCTGGGCTGGCAGGCCGGCAGCCTGACCTTGCTGATGCCGCTGTCGGCCACGCTGGGCATTCTGGCCGTGCCGGATG TGCCGATGGCATTGGCGGCGGTGCTGTGCATGGATGCCGGTGCGCGCTTGTTGCGCGAGGTCGATGCCACCAGCGCGCTG GAGCTCGCCATCGGCCTGGTCATCGGTGCGCTCAGCCACTACCGCTTTGTCGGGGTGATCGGGGTGGGCTGCATCGCATT GCTGTGCATCCCGCAGGGGCGTGCGGTGATGCGCGACCCACGCATCTGGATGGCGCTGACCGTCGGCGCGGTGAGCTGGC TGCCGCTGCTGTTCTGGAACACCGACCACGACGATGCCGGGTTGCGCTTTCAATTGGTCGACCGGCATCCGTGGCGGTTC CAGATCGGCGGGCTGTGGTTTGTGCTGATCCAGACGGTGGCGGTGACGCCGCTGTTGGCCTGGGCGATGGTCAAGGTCGG TCTGGCCGGCACCCGCAGCGGCGGCGGCTCGCGCGCGCAATGGCGCTATTTCGGCTTGCTCGGCGGCATTTCGACCGTGG CGATCTTCGTGCTGGGCTTCTTCAGCGATGCCGAGCGGATCAGCTTCCACTGGCCGCTGCCCGGCTATCTGGCGCTGCTG GTGGCGGTGCCGGTGATCCTGATGCGCTGGCCGCATCCGCTACGCCGCACGGCGTGGTTGATCGCACTGCTGGGCATGCT CGGCGCATACGGCTACTACTTGGCGGTGTCGGTGCCGTCGATCCGCGCGCATGCCGCCGGCGAAAAATACTACCCGCGCA ACTTCGCCGGCTGGAACGATCTGGCGGCTGCGGTCAAATCGCGGCTGGCGCAGATGCCGCCGGGCACGCGCGTGTTGGCG GAGAACTTCAAGGTTGGCGCCGAGCTCGGCTTCCAGTTGCACGATGCCAAGATCGAGGTGCTGCGTGCCGCGTTGAACGA CAAGCACGGGCGCAGCGCGCAGCTGCAGCAGTGGGGGTTGCTCAGCGACGGTACGCGTGACGGGCAGCGGCTGCTGGTGC TCTCGCCCAGCGATCAGCGCTACCGCGACCTGCTCACGCGTTACCACGCCATCTGCGACATGGTCGGCCCGCTGCCGCCG CCCACTGTGGTCTCCACCGATCACGGCTATCAGCGCTTTCTGCTGTTCGCACTGCCCGCGCAACGCCAGCCCGGGCCGTG CGCGACCCCGGCGATGGCGTGGATCGATGCGCCGCTGCCGGATGTCGCCGTGTCCGGCACGCTTCAAGTGCATGGCTGGG CCTTCAAGGATGGCGTTGGGCTAGCGAATGTCGAGCTGCTGCTCGACGGTCGCCCGATCGCGCAGGCCACCTACGGCACG CCGCTGGATGTGCGCCCGTACTGGAAAATCTCCACCGACCCGCAGCATCCCAACGTCGGCTTCACTGCAACGCTCGACAC CCACGCCTTGCCGCCCGGCACGCACTGGCTGGGCCTGCGCCTGCATGGCCGCGACGGCAGCGTCGAGGATTGGTGGGAGC AGCCCCTTACCGTTTCAGCACCTCAGAGCACGCGATGA
Upstream 100 bases:
>100_bases CAGCGAATTGACCTGGTCTTGTGCGCGCCGCAGCGATTGACGCAGCGCATCGGTTAGCATTTCCGTGGAACGCAGCGGTG TCGACATCACAATTCCGTAG
Downstream 100 bases:
>100_bases CCGATGCCATGCCTGTTGCCCATCCCGCGCCGGTGCCCGGGATTCGAATCGCCGTGCTGGTGCCGTGCCACAACGAAGCG GCGACTGTCGCTGCGGTCGT
Product: hypothetical protein
Products: NA
Alternate protein names: Transmembrane Protein; Glycosyltransferase; Dolichyl-Phosphate Beta-D-Mannosyltransferase; Glycosyl Transferase Family; Dolichol Monophosphate Mannose Synthase
Number of amino acids: Translated: 625; Mature: 625
Protein sequence:
>625_residues MERRVHRAMQGDQRAHRTFVILWTLATAVKLLIAARLPLFVDEAFYWQEGQHLAAAYSDLPGMTAWLARLGVELGGHHLL ALRLPFLAISALIPWLIAHIATRWFGSTLGWQAGSLTLLMPLSATLGILAVPDVPMALAAVLCMDAGARLLREVDATSAL ELAIGLVIGALSHYRFVGVIGVGCIALLCIPQGRAVMRDPRIWMALTVGAVSWLPLLFWNTDHDDAGLRFQLVDRHPWRF QIGGLWFVLIQTVAVTPLLAWAMVKVGLAGTRSGGGSRAQWRYFGLLGGISTVAIFVLGFFSDAERISFHWPLPGYLALL VAVPVILMRWPHPLRRTAWLIALLGMLGAYGYYLAVSVPSIRAHAAGEKYYPRNFAGWNDLAAAVKSRLAQMPPGTRVLA ENFKVGAELGFQLHDAKIEVLRAALNDKHGRSAQLQQWGLLSDGTRDGQRLLVLSPSDQRYRDLLTRYHAICDMVGPLPP PTVVSTDHGYQRFLLFALPAQRQPGPCATPAMAWIDAPLPDVAVSGTLQVHGWAFKDGVGLANVELLLDGRPIAQATYGT PLDVRPYWKISTDPQHPNVGFTATLDTHALPPGTHWLGLRLHGRDGSVEDWWEQPLTVSAPQSTR
Sequences:
>Translated_625_residues MERRVHRAMQGDQRAHRTFVILWTLATAVKLLIAARLPLFVDEAFYWQEGQHLAAAYSDLPGMTAWLARLGVELGGHHLL ALRLPFLAISALIPWLIAHIATRWFGSTLGWQAGSLTLLMPLSATLGILAVPDVPMALAAVLCMDAGARLLREVDATSAL ELAIGLVIGALSHYRFVGVIGVGCIALLCIPQGRAVMRDPRIWMALTVGAVSWLPLLFWNTDHDDAGLRFQLVDRHPWRF QIGGLWFVLIQTVAVTPLLAWAMVKVGLAGTRSGGGSRAQWRYFGLLGGISTVAIFVLGFFSDAERISFHWPLPGYLALL VAVPVILMRWPHPLRRTAWLIALLGMLGAYGYYLAVSVPSIRAHAAGEKYYPRNFAGWNDLAAAVKSRLAQMPPGTRVLA ENFKVGAELGFQLHDAKIEVLRAALNDKHGRSAQLQQWGLLSDGTRDGQRLLVLSPSDQRYRDLLTRYHAICDMVGPLPP PTVVSTDHGYQRFLLFALPAQRQPGPCATPAMAWIDAPLPDVAVSGTLQVHGWAFKDGVGLANVELLLDGRPIAQATYGT PLDVRPYWKISTDPQHPNVGFTATLDTHALPPGTHWLGLRLHGRDGSVEDWWEQPLTVSAPQSTR >Mature_625_residues MERRVHRAMQGDQRAHRTFVILWTLATAVKLLIAARLPLFVDEAFYWQEGQHLAAAYSDLPGMTAWLARLGVELGGHHLL ALRLPFLAISALIPWLIAHIATRWFGSTLGWQAGSLTLLMPLSATLGILAVPDVPMALAAVLCMDAGARLLREVDATSAL ELAIGLVIGALSHYRFVGVIGVGCIALLCIPQGRAVMRDPRIWMALTVGAVSWLPLLFWNTDHDDAGLRFQLVDRHPWRF QIGGLWFVLIQTVAVTPLLAWAMVKVGLAGTRSGGGSRAQWRYFGLLGGISTVAIFVLGFFSDAERISFHWPLPGYLALL VAVPVILMRWPHPLRRTAWLIALLGMLGAYGYYLAVSVPSIRAHAAGEKYYPRNFAGWNDLAAAVKSRLAQMPPGTRVLA ENFKVGAELGFQLHDAKIEVLRAALNDKHGRSAQLQQWGLLSDGTRDGQRLLVLSPSDQRYRDLLTRYHAICDMVGPLPP PTVVSTDHGYQRFLLFALPAQRQPGPCATPAMAWIDAPLPDVAVSGTLQVHGWAFKDGVGLANVELLLDGRPIAQATYGT PLDVRPYWKISTDPQHPNVGFTATLDTHALPPGTHWLGLRLHGRDGSVEDWWEQPLTVSAPQSTR
Specific function: Unknown
COG id: COG1807
COG function: function code M; 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 68586; Mature: 68586
Theoretical pI: Translated: 9.38; Mature: 9.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MERRVHRAMQGDQRAHRTFVILWTLATAVKLLIAARLPLFVDEAFYWQEGQHLAAAYSDL CCHHHHHHHCCCCHHHHHEEHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHCC PGMTAWLARLGVELGGHHLLALRLPFLAISALIPWLIAHIATRWFGSTLGWQAGSLTLLM CCHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEE PLSATLGILAVPDVPMALAAVLCMDAGARLLREVDATSALELAIGLVIGALSHYRFVGVI EHHHCCCEEECCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH GVGCIALLCIPQGRAVMRDPRIWMALTVGAVSWLPLLFWNTDHDDAGLRFQLVDRHPWRF HHHHHHHHHCCCCCCEEECCCEEEEEHHHHHHHHHHEEECCCCCCCCCEEEEECCCCCEE QIGGLWFVLIQTVAVTPLLAWAMVKVGLAGTRSGGGSRAQWRYFGLLGGISTVAIFVLGF EECHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHH FSDAERISFHWPLPGYLALLVAVPVILMRWPHPLRRTAWLIALLGMLGAYGYYLAVSVPS CCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCEEEEEECCC IRAHAAGEKYYPRNFAGWNDLAAAVKSRLAQMPPGTRVLAENFKVGAELGFQLHDAKIEV HHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHCCCCCHHHCCEEEHHHHHH LRAALNDKHGRSAQLQQWGLLSDGTRDGQRLLVLSPSDQRYRDLLTRYHAICDMVGPLPP HHHHHCCCCCCCCHHHHCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHCCCCC PTVVSTDHGYQRFLLFALPAQRQPGPCATPAMAWIDAPLPDVAVSGTLQVHGWAFKDGVG CCEEECCCCHHEEEEEEECCCCCCCCCCCCHHHHHCCCCCCCEECCEEEEEEEEEECCCC LANVELLLDGRPIAQATYGTPLDVRPYWKISTDPQHPNVGFTATLDTHALPPGTHWLGLR EEEEEEEECCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCEEEEECCCCCCCCCEEEEEE LHGRDGSVEDWWEQPLTVSAPQSTR EECCCCCHHHHHCCCEEECCCCCCC >Mature Secondary Structure MERRVHRAMQGDQRAHRTFVILWTLATAVKLLIAARLPLFVDEAFYWQEGQHLAAAYSDL CCHHHHHHHCCCCHHHHHEEHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHCC PGMTAWLARLGVELGGHHLLALRLPFLAISALIPWLIAHIATRWFGSTLGWQAGSLTLLM CCHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEE PLSATLGILAVPDVPMALAAVLCMDAGARLLREVDATSALELAIGLVIGALSHYRFVGVI EHHHCCCEEECCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH GVGCIALLCIPQGRAVMRDPRIWMALTVGAVSWLPLLFWNTDHDDAGLRFQLVDRHPWRF HHHHHHHHHCCCCCCEEECCCEEEEEHHHHHHHHHHEEECCCCCCCCCEEEEECCCCCEE QIGGLWFVLIQTVAVTPLLAWAMVKVGLAGTRSGGGSRAQWRYFGLLGGISTVAIFVLGF EECHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHH FSDAERISFHWPLPGYLALLVAVPVILMRWPHPLRRTAWLIALLGMLGAYGYYLAVSVPS CCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCEEEEEECCC IRAHAAGEKYYPRNFAGWNDLAAAVKSRLAQMPPGTRVLAENFKVGAELGFQLHDAKIEV HHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHCCCCCHHHCCEEEHHHHHH LRAALNDKHGRSAQLQQWGLLSDGTRDGQRLLVLSPSDQRYRDLLTRYHAICDMVGPLPP HHHHHCCCCCCCCHHHHCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHCCCCC PTVVSTDHGYQRFLLFALPAQRQPGPCATPAMAWIDAPLPDVAVSGTLQVHGWAFKDGVG CCEEECCCCHHEEEEEEECCCCCCCCCCCCHHHHHCCCCCCCEECCEEEEEEEEEECCCC LANVELLLDGRPIAQATYGTPLDVRPYWKISTDPQHPNVGFTATLDTHALPPGTHWLGLR EEEEEEEECCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCEEEEECCCCCCCCCEEEEEE LHGRDGSVEDWWEQPLTVSAPQSTR EECCCCCHHHHHCCCEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA