| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21241810
Identifier: 21241810
GI number: 21241810
Start: 1206378
End: 1206773
Strand: Direct
Name: 21241810
Synonym: XAC1045
Alternate gene names: NA
Gene position: 1206378-1206773 (Clockwise)
Preceding gene: 21241809
Following gene: 21241811
Centisome position: 23.31
GC content: 66.41
Gene sequence:
>396_bases ATGAGTGGTTCCGACGAGGGCAGCGCCGACCGCCTGCGCGAGTTCACGCAATTCCGCCAGCGCATGAACCAGCGCATCCT GGCCGAGCCGAACCAGGTGGTGCGGCGGTTCTTCGCGCTGGACACGCAGACCTACCAAGCCGGCGCGCTGGACGTGAAGA CCAAGGAACTGCTCGGCCTGGTCGCCTCGATGGTGCTGCGCTGCGACGATTGCATCAGCTATCACGTGGCCCAGTGCAAG GAAGCCGGCGTGAGCCGGGAAGAGTTCTTCGAGACCTTCTCGGTCGGCCTGGTGGTCGGCGGCTCCATTGTCATCCCGCA TCTGCGCCGCGCGGTGGATTTCCTGGACCAGCTCGAAGGTGGCGCGCAGGCGCCGGCCCAGCACGCACACGACTGA
Upstream 100 bases:
>100_bases TCGTCGGCGACGTCCATGTGGGTGGCTACGACGACATGATGGCCATGCATCGTGCCGGCAAGCTCGAGCCGCTGCTGGCC GGCAGCGCGGGCGGCCAGGC
Downstream 100 bases:
>100_bases GCGTGTTGCTGCGGCGCGCACGTGGGGATCGGGGTTCGTCAAAGCCAGTAACGCACGCGCCGCCCACCGAGGCGGCGCGT TGCGTTCGGGCACTTGCACT
Product: hypothetical protein
Products: NA
Alternate protein names: Carboxymuconolactone Decarboxylase; Alkylhydroperoxidase; Carboxymuconolactone Decarboxylase Family Protein; Decarboxylase; Carboxymuconolactone Decarboxylase Protein; Alkylhydroperoxidase AhpD; Alkylhydroperoxidase Like Protein Ahpd Family
Number of amino acids: Translated: 131; Mature: 130
Protein sequence:
>131_residues MSGSDEGSADRLREFTQFRQRMNQRILAEPNQVVRRFFALDTQTYQAGALDVKTKELLGLVASMVLRCDDCISYHVAQCK EAGVSREEFFETFSVGLVVGGSIVIPHLRRAVDFLDQLEGGAQAPAQHAHD
Sequences:
>Translated_131_residues MSGSDEGSADRLREFTQFRQRMNQRILAEPNQVVRRFFALDTQTYQAGALDVKTKELLGLVASMVLRCDDCISYHVAQCK EAGVSREEFFETFSVGLVVGGSIVIPHLRRAVDFLDQLEGGAQAPAQHAHD >Mature_130_residues SGSDEGSADRLREFTQFRQRMNQRILAEPNQVVRRFFALDTQTYQAGALDVKTKELLGLVASMVLRCDDCISYHVAQCKE AGVSREEFFETFSVGLVVGGSIVIPHLRRAVDFLDQLEGGAQAPAQHAHD
Specific function: Unknown
COG id: COG0599
COG function: function code S; Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14572; Mature: 14440
Theoretical pI: Translated: 5.60; Mature: 5.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGSDEGSADRLREFTQFRQRMNQRILAEPNQVVRRFFALDTQTYQAGALDVKTKELLGL CCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHH VASMVLRCDDCISYHVAQCKEAGVSREEFFETFSVGLVVGGSIVIPHLRRAVDFLDQLEG HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCC GAQAPAQHAHD CCCCCCCCCCC >Mature Secondary Structure SGSDEGSADRLREFTQFRQRMNQRILAEPNQVVRRFFALDTQTYQAGALDVKTKELLGL CCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHH VASMVLRCDDCISYHVAQCKEAGVSREEFFETFSVGLVVGGSIVIPHLRRAVDFLDQLEG HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCC GAQAPAQHAHD CCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA