Definition Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome.
Accession NC_003919
Length 5,175,554

Click here to switch to the map view.

The map label for this gene is 21241810

Identifier: 21241810

GI number: 21241810

Start: 1206378

End: 1206773

Strand: Direct

Name: 21241810

Synonym: XAC1045

Alternate gene names: NA

Gene position: 1206378-1206773 (Clockwise)

Preceding gene: 21241809

Following gene: 21241811

Centisome position: 23.31

GC content: 66.41

Gene sequence:

>396_bases
ATGAGTGGTTCCGACGAGGGCAGCGCCGACCGCCTGCGCGAGTTCACGCAATTCCGCCAGCGCATGAACCAGCGCATCCT
GGCCGAGCCGAACCAGGTGGTGCGGCGGTTCTTCGCGCTGGACACGCAGACCTACCAAGCCGGCGCGCTGGACGTGAAGA
CCAAGGAACTGCTCGGCCTGGTCGCCTCGATGGTGCTGCGCTGCGACGATTGCATCAGCTATCACGTGGCCCAGTGCAAG
GAAGCCGGCGTGAGCCGGGAAGAGTTCTTCGAGACCTTCTCGGTCGGCCTGGTGGTCGGCGGCTCCATTGTCATCCCGCA
TCTGCGCCGCGCGGTGGATTTCCTGGACCAGCTCGAAGGTGGCGCGCAGGCGCCGGCCCAGCACGCACACGACTGA

Upstream 100 bases:

>100_bases
TCGTCGGCGACGTCCATGTGGGTGGCTACGACGACATGATGGCCATGCATCGTGCCGGCAAGCTCGAGCCGCTGCTGGCC
GGCAGCGCGGGCGGCCAGGC

Downstream 100 bases:

>100_bases
GCGTGTTGCTGCGGCGCGCACGTGGGGATCGGGGTTCGTCAAAGCCAGTAACGCACGCGCCGCCCACCGAGGCGGCGCGT
TGCGTTCGGGCACTTGCACT

Product: hypothetical protein

Products: NA

Alternate protein names: Carboxymuconolactone Decarboxylase; Alkylhydroperoxidase; Carboxymuconolactone Decarboxylase Family Protein; Decarboxylase; Carboxymuconolactone Decarboxylase Protein; Alkylhydroperoxidase AhpD; Alkylhydroperoxidase Like Protein Ahpd Family

Number of amino acids: Translated: 131; Mature: 130

Protein sequence:

>131_residues
MSGSDEGSADRLREFTQFRQRMNQRILAEPNQVVRRFFALDTQTYQAGALDVKTKELLGLVASMVLRCDDCISYHVAQCK
EAGVSREEFFETFSVGLVVGGSIVIPHLRRAVDFLDQLEGGAQAPAQHAHD

Sequences:

>Translated_131_residues
MSGSDEGSADRLREFTQFRQRMNQRILAEPNQVVRRFFALDTQTYQAGALDVKTKELLGLVASMVLRCDDCISYHVAQCK
EAGVSREEFFETFSVGLVVGGSIVIPHLRRAVDFLDQLEGGAQAPAQHAHD
>Mature_130_residues
SGSDEGSADRLREFTQFRQRMNQRILAEPNQVVRRFFALDTQTYQAGALDVKTKELLGLVASMVLRCDDCISYHVAQCKE
AGVSREEFFETFSVGLVVGGSIVIPHLRRAVDFLDQLEGGAQAPAQHAHD

Specific function: Unknown

COG id: COG0599

COG function: function code S; Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14572; Mature: 14440

Theoretical pI: Translated: 5.60; Mature: 5.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGSDEGSADRLREFTQFRQRMNQRILAEPNQVVRRFFALDTQTYQAGALDVKTKELLGL
CCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHH
VASMVLRCDDCISYHVAQCKEAGVSREEFFETFSVGLVVGGSIVIPHLRRAVDFLDQLEG
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCC
GAQAPAQHAHD
CCCCCCCCCCC
>Mature Secondary Structure 
SGSDEGSADRLREFTQFRQRMNQRILAEPNQVVRRFFALDTQTYQAGALDVKTKELLGL
CCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHH
VASMVLRCDDCISYHVAQCKEAGVSREEFFETFSVGLVVGGSIVIPHLRRAVDFLDQLEG
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCC
GAQAPAQHAHD
CCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA