| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is cvpA [C]
Identifier: 21241796
GI number: 21241796
Start: 1189113
End: 1189871
Strand: Direct
Name: cvpA [C]
Synonym: XAC1031
Alternate gene names: 21241796
Gene position: 1189113-1189871 (Clockwise)
Preceding gene: 21241795
Following gene: 21241797
Centisome position: 22.98
GC content: 67.06
Gene sequence:
>759_bases ATGATCGATATGGTGCTGGGCGTCATCATTCTGGTGTCGGCCCTGTTGGGCTTGCTGCGTGGCTTTGTCGCCATCGTGGT GGGCACGTTGTCGTGGTTGTTGGCCGGCTGGGCCACCTTCATGTTCGGCGGCGCGGCCGCGCGCTGGCTGGCCGATGGCA AACACCCGTCTGCGACCGAATCGTTCGGCGGCTACGCCATGGTGTTCGTCGGTGTGCTGATCACCGTGGCAGTGATTGGC ATGGTGATCCGCGCGGGCGTGGATGCGATCAAGCTCGGCGGCACCGACCGCATGCTCGGGTTCGGCCTGGGCGTGGTGCG CGGCGCGTTTCTGGCCAGCGTGCTGGTGCTGCTGATGGGCTTCACCCCGCTGCCGCGCGAGCCGGCATGGCGCCAGTCGG TGCTGCTGCCCATGCTGCAGCCGGGCGCCGGCTGGATGCGGGCGCAACTGCCGGCCTGGCGGATGCCGTCGATGGAGATG CCATCAATGGAACTGGGCAACTTGCCCACGGAGTTGGGGAAGTTGCCTTCGGCAGGCGATAATACGGACCTGGGCAAGGC ACTTGGCGGTTCCGGGCTGAGCGACACCATCACCCGTGCGCTTGCCCGTGCGCTTGGCAAACCCGGCAAGACGGCTGGCG ACGGACGCGATCCGACGCAGGCGATGCCGGCCAACATCGATCCGGCGCAGGTTCGCGGCGGAGAAAGCGACCCGGCTCGG GTCGAATCCCAAGGCCAGGCACGGCCACCTTCACAGTAA
Upstream 100 bases:
>100_bases GCTGCTGGATTTTCGAACGCCTCGCACCCATGGAGGGGAGGGCAATGACGACCGAGCCCAATTGCACTCACGGCGCGCGC GCCACGCGGAGAGGTTGCCC
Downstream 100 bases:
>100_bases CGGCGCAAGCCGAAGCGGAGAACGCGCACCATGTGTGGCATCGTCGGTATTGTCGGCAACCAGAACGTCGCCGGGCAGCT GTATGACGGCCTGACCGTCC
Product: colicin V production protein
Products: NA
Alternate protein names: CvpA Family Protein; Colicin V Family Protein CvpA; 2-Oxoglutarate Dehydrogenase E1 Component; Colicin V
Number of amino acids: Translated: 252; Mature: 252
Protein sequence:
>252_residues MIDMVLGVIILVSALLGLLRGFVAIVVGTLSWLLAGWATFMFGGAAARWLADGKHPSATESFGGYAMVFVGVLITVAVIG MVIRAGVDAIKLGGTDRMLGFGLGVVRGAFLASVLVLLMGFTPLPREPAWRQSVLLPMLQPGAGWMRAQLPAWRMPSMEM PSMELGNLPTELGKLPSAGDNTDLGKALGGSGLSDTITRALARALGKPGKTAGDGRDPTQAMPANIDPAQVRGGESDPAR VESQGQARPPSQ
Sequences:
>Translated_252_residues MIDMVLGVIILVSALLGLLRGFVAIVVGTLSWLLAGWATFMFGGAAARWLADGKHPSATESFGGYAMVFVGVLITVAVIG MVIRAGVDAIKLGGTDRMLGFGLGVVRGAFLASVLVLLMGFTPLPREPAWRQSVLLPMLQPGAGWMRAQLPAWRMPSMEM PSMELGNLPTELGKLPSAGDNTDLGKALGGSGLSDTITRALARALGKPGKTAGDGRDPTQAMPANIDPAQVRGGESDPAR VESQGQARPPSQ >Mature_252_residues MIDMVLGVIILVSALLGLLRGFVAIVVGTLSWLLAGWATFMFGGAAARWLADGKHPSATESFGGYAMVFVGVLITVAVIG MVIRAGVDAIKLGGTDRMLGFGLGVVRGAFLASVLVLLMGFTPLPREPAWRQSVLLPMLQPGAGWMRAQLPAWRMPSMEM PSMELGNLPTELGKLPSAGDNTDLGKALGGSGLSDTITRALARALGKPGKTAGDGRDPTQAMPANIDPAQVRGGESDPAR VESQGQARPPSQ
Specific function: Required For Colicin V Production From Plasmid Incfi Colv3-K30. [C]
COG id: COG1286
COG function: function code R; Uncharacterized membrane protein, required for colicin V production
Gene ontology:
Cell location: Integral Membrane Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26201; Mature: 26201
Theoretical pI: Translated: 10.26; Mature: 10.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.6 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.6 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIDMVLGVIILVSALLGLLRGFVAIVVGTLSWLLAGWATFMFGGAAARWLADGKHPSATE CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH SFGGYAMVFVGVLITVAVIGMVIRAGVDAIKLGGTDRMLGFGLGVVRGAFLASVLVLLMG HCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHC FTPLPREPAWRQSVLLPMLQPGAGWMRAQLPAWRMPSMEMPSMELGNLPTELGKLPSAGD CCCCCCCCHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCCCCCHHCCCCHHHCCCCCCCC NTDLGKALGGSGLSDTITRALARALGKPGKTAGDGRDPTQAMPANIDPAQVRGGESDPAR CCHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCHH VESQGQARPPSQ HCCCCCCCCCCC >Mature Secondary Structure MIDMVLGVIILVSALLGLLRGFVAIVVGTLSWLLAGWATFMFGGAAARWLADGKHPSATE CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH SFGGYAMVFVGVLITVAVIGMVIRAGVDAIKLGGTDRMLGFGLGVVRGAFLASVLVLLMG HCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHC FTPLPREPAWRQSVLLPMLQPGAGWMRAQLPAWRMPSMEMPSMELGNLPTELGKLPSAGD CCCCCCCCHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCCCCCHHCCCCHHHCCCCCCCC NTDLGKALGGSGLSDTITRALARALGKPGKTAGDGRDPTQAMPANIDPAQVRGGESDPAR CCHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCHH VESQGQARPPSQ HCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA