| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is hemA [H]
Identifier: 21241715
GI number: 21241715
Start: 1107260
End: 1108540
Strand: Reverse
Name: hemA [H]
Synonym: XAC0945
Alternate gene names: 21241715
Gene position: 1108540-1107260 (Counterclockwise)
Preceding gene: 21241764
Following gene: 21241714
Centisome position: 21.42
GC content: 65.96
Gene sequence:
>1281_bases ATGACGTTGTGGGTGCTCGGACTGAATCACCAGACCGCACCTGTGGACCTGCGCGAACGCGCGGCGTTCGCAGGTGATGC GCTACCGCGCGCGCTCGAATCGCTGCGTGCGCTGCCCCAGGTGAGCGAGGCCGCGCTGCTGTCCACCTGCAACCGTACCG AGTTGTATGCGATGGCCGAGGAGGCGCACAGCCTGGTCAACTGGCTGGAAACCCACGCGCCCGGCCTGAGCGGTTATCTG TACCAGCACCAGGAAGCCGAGGCGGTGCGTCACCTGTTTCGTGTCGCCACCGGGCTGGATTCGATGGTATTGGGAGAACC CCAGATTTTGGGCCAGGTGAAGGACGCCTGGGCAGTGGCGCGGGCGCACGGCGCGCTGGGCAGCGGGTTGGACCGGCTGT TCCAACAGACCTTTTCGGTGGCCAAGCGTGCGCGTACCGACACCCGTGTCGGCGCAAATCCAGTGTCGGTCGCATCCACG GCGGTGCGACTGGCACAGGACTCGTTTGCCCGGCTCAACGAATCCACGGTGCTGTTGATCGGTGCCGGCGAAACCATCGA ACTGGCGGCCAAGCATCTGAGCGAAGGCCGCGTGCGCCGCCTGCTGATCGCCAACCGCACCCTGGCCCATGCACAGACAC TGGCCAGCCAGCACGGCGGCTTCGCTTTGCCGCTGACCGATCTGGAACGCCACCTGGCCGAGGCCGACGTGGTGTTTTCG GCCACCGCTGCGCGTGAGCCGCTGGTGACCCGCGTACAGGTGGAACAGGCCTTACGCGCCCGCAAGCGCAAACCGATGCT GCTGTTCGACCTGGCGGTGCCGCGCGATATCGAGGCCTCGGTGGGCGAGTTGAGCGACGCCTACCTGTACACGGTGGACG ACCTGGAACGTGCGGTCGAAGACAATCGCCGCGGGCGCCGCGAAGCGGCCGACCAGGCCGAAGCCATCATCGACCTGCAA GTGGCGCGCTATGTCGAAACGCTGCAGGCCACTGCGCATCAGGCACCACTCAAGCGGCTGCGCGCGTTTGGCGATAGCAC CCGCGACGAACTGCTGGCCAAGGCACGCCAGCAGTTGCACAACGGAAAACCGGCCGACGAAGTGCTGGAACAGTTGGCGC ATGCGCTGACCAACCGCTTGCTGCATCCGCCCACCGCCGCACTGCGCGATGCGGCGCTCAACAACGACCTGGAATTGACC GCTGCGGCCGACCGGCTGTTTCCGGAAAAGCCGGGTTACCAACATCCCCCCCATAGCTACCCCGATCGTGAGGACCGATG A
Upstream 100 bases:
>100_bases AAAAGAACACTCAGGATGCGAATCGGTACAGGCATCGGGGGCAACCGGGCCGTAAAATGGGGCCCTGAATGGCCGCCAGC TTATCGCAAGCAACTGAACA
Downstream 100 bases:
>100_bases CGCCGACCCTGCGCCGTAAGCTCCAAGCGCTGGCCGAGCGCCGCGAAGAACTGCAGCACCTGCTCTCCGACCCCGATGTG GTGGGCAACAACGACACGTT
Product: glutamyl-tRNA reductase
Products: NA
Alternate protein names: GluTR [H]
Number of amino acids: Translated: 426; Mature: 425
Protein sequence:
>426_residues MTLWVLGLNHQTAPVDLRERAAFAGDALPRALESLRALPQVSEAALLSTCNRTELYAMAEEAHSLVNWLETHAPGLSGYL YQHQEAEAVRHLFRVATGLDSMVLGEPQILGQVKDAWAVARAHGALGSGLDRLFQQTFSVAKRARTDTRVGANPVSVAST AVRLAQDSFARLNESTVLLIGAGETIELAAKHLSEGRVRRLLIANRTLAHAQTLASQHGGFALPLTDLERHLAEADVVFS ATAAREPLVTRVQVEQALRARKRKPMLLFDLAVPRDIEASVGELSDAYLYTVDDLERAVEDNRRGRREAADQAEAIIDLQ VARYVETLQATAHQAPLKRLRAFGDSTRDELLAKARQQLHNGKPADEVLEQLAHALTNRLLHPPTAALRDAALNNDLELT AAADRLFPEKPGYQHPPHSYPDREDR
Sequences:
>Translated_426_residues MTLWVLGLNHQTAPVDLRERAAFAGDALPRALESLRALPQVSEAALLSTCNRTELYAMAEEAHSLVNWLETHAPGLSGYL YQHQEAEAVRHLFRVATGLDSMVLGEPQILGQVKDAWAVARAHGALGSGLDRLFQQTFSVAKRARTDTRVGANPVSVAST AVRLAQDSFARLNESTVLLIGAGETIELAAKHLSEGRVRRLLIANRTLAHAQTLASQHGGFALPLTDLERHLAEADVVFS ATAAREPLVTRVQVEQALRARKRKPMLLFDLAVPRDIEASVGELSDAYLYTVDDLERAVEDNRRGRREAADQAEAIIDLQ VARYVETLQATAHQAPLKRLRAFGDSTRDELLAKARQQLHNGKPADEVLEQLAHALTNRLLHPPTAALRDAALNNDLELT AAADRLFPEKPGYQHPPHSYPDREDR >Mature_425_residues TLWVLGLNHQTAPVDLRERAAFAGDALPRALESLRALPQVSEAALLSTCNRTELYAMAEEAHSLVNWLETHAPGLSGYLY QHQEAEAVRHLFRVATGLDSMVLGEPQILGQVKDAWAVARAHGALGSGLDRLFQQTFSVAKRARTDTRVGANPVSVASTA VRLAQDSFARLNESTVLLIGAGETIELAAKHLSEGRVRRLLIANRTLAHAQTLASQHGGFALPLTDLERHLAEADVVFSA TAAREPLVTRVQVEQALRARKRKPMLLFDLAVPRDIEASVGELSDAYLYTVDDLERAVEDNRRGRREAADQAEAIIDLQV ARYVETLQATAHQAPLKRLRAFGDSTRDELLAKARQQLHNGKPADEVLEQLAHALTNRLLHPPTAALRDAALNNDLELTA AADRLFPEKPGYQHPPHSYPDREDR
Specific function: Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA) [H]
COG id: COG0373
COG function: function code H; Glutamyl-tRNA reductase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glutamyl-tRNA reductase family [H]
Homologues:
Organism=Escherichia coli, GI1787461, Length=406, Percent_Identity=47.7832512315271, Blast_Score=350, Evalue=8e-98,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000343 - InterPro: IPR015896 - InterPro: IPR015895 - InterPro: IPR016040 - InterPro: IPR018214 - InterPro: IPR006151 [H]
Pfam domain/function: PF00745 GlutR_dimer; PF05201 GlutR_N; PF01488 Shikimate_DH [H]
EC number: =1.2.1.70 [H]
Molecular weight: Translated: 46831; Mature: 46700
Theoretical pI: Translated: 6.62; Mature: 6.62
Prosite motif: PS00747 GLUTR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLWVLGLNHQTAPVDLRERAAFAGDALPRALESLRALPQVSEAALLSTCNRTELYAMAE CEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHH EAHSLVNWLETHAPGLSGYLYQHQEAEAVRHLFRVATGLDSMVLGEPQILGQVKDAWAVA HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHHH RAHGALGSGLDRLFQQTFSVAKRARTDTRVGANPVSVASTAVRLAQDSFARLNESTVLLI HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEE GAGETIELAAKHLSEGRVRRLLIANRTLAHAQTLASQHGGFALPLTDLERHLAEADVVFS ECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCHHHHHHHHHHHHHHHH ATAAREPLVTRVQVEQALRARKRKPMLLFDLAVPRDIEASVGELSDAYLYTVDDLERAVE HHHCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHCCCCHHEEEHHHHHHHHH DNRRGRREAADQAEAIIDLQVARYVETLQATAHQAPLKRLRAFGDSTRDELLAKARQQLH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH NGKPADEVLEQLAHALTNRLLHPPTAALRDAALNNDLELTAAADRLFPEKPGYQHPPHSY CCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCEEEHHHHHCCCCCCCCCCCCCCC PDREDR CCCCCC >Mature Secondary Structure TLWVLGLNHQTAPVDLRERAAFAGDALPRALESLRALPQVSEAALLSTCNRTELYAMAE EEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHH EAHSLVNWLETHAPGLSGYLYQHQEAEAVRHLFRVATGLDSMVLGEPQILGQVKDAWAVA HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHHH RAHGALGSGLDRLFQQTFSVAKRARTDTRVGANPVSVASTAVRLAQDSFARLNESTVLLI HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEE GAGETIELAAKHLSEGRVRRLLIANRTLAHAQTLASQHGGFALPLTDLERHLAEADVVFS ECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCHHHHHHHHHHHHHHHH ATAAREPLVTRVQVEQALRARKRKPMLLFDLAVPRDIEASVGELSDAYLYTVDDLERAVE HHHCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHCCCCHHEEEHHHHHHHHH DNRRGRREAADQAEAIIDLQVARYVETLQATAHQAPLKRLRAFGDSTRDELLAKARQQLH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH NGKPADEVLEQLAHALTNRLLHPPTAALRDAALNNDLELTAAADRLFPEKPGYQHPPHSY CCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCEEEHHHHHCCCCCCCCCCCCCCC PDREDR CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA